EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000022221 (Gene tree)
Gene ID: 111217481
Gene Symbol: ddx42
Alias: im:7148194|si:dkey-15n1.10|zgc:111815
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 8008 bases
Position: chrBDQW01000044.1:3740224-3748231
Accession: 111217481
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000030857	ResIII	PF04851.15	8.9e-07	1	1
ENSSDUP00000030865	ResIII	PF04851.15	1.8e-05	1	1
ENSSDUP00000030857	DEAD	PF00270.29	1.4e-48	1	1
ENSSDUP00000030865	DEAD	PF00270.29	2e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000031401	-	2634	-	ENSSDUP00000030865	877 (aa)	-	-
ENSSDUT00000031393	-	3805	XM_022739371	ENSSDUP00000030857	910 (aa)	XP_022595092	UPI000BBE7E70

Gene Model

Click here to download ENSSDUG00000022221's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022221's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000022221	ddx42	52	35.329	ENSSDUG00000013166	-	72	35.729
ENSSDUG00000022221	ddx42	51	36.052	ENSSDUG00000004279	-	80	36.735
ENSSDUG00000022221	ddx42	53	39.059	ENSSDUG00000008456	fam193b	77	39.059
ENSSDUG00000022221	ddx42	62	41.522	ENSSDUG00000020991	ddx46	59	40.862

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022221	ddx42	99	71.369	ENSG00000198231	DDX42	100	79.048	Homo_sapiens
ENSSDUG00000022221	ddx42	91	95.553	ENSAPOG00000017675	ddx42	97	95.023	Acanthochromis_polyacanthus
ENSSDUG00000022221	ddx42	99	72.450	ENSAMEG00000003200	DDX42	99	71.294	Ailuropoda_melanoleuca
ENSSDUG00000022221	ddx42	85	91.051	ENSACIG00000007376	ddx42	99	92.737	Amphilophus_citrinellus
ENSSDUG00000022221	ddx42	100	89.882	ENSAOCG00000003520	ddx42	100	93.824	Amphiprion_ocellaris
ENSSDUG00000022221	ddx42	100	91.658	ENSAPEG00000000984	ddx42	100	93.594	Amphiprion_percula
ENSSDUG00000022221	ddx42	100	92.670	ENSATEG00000022920	ddx42	100	92.998	Anabas_testudineus
ENSSDUG00000022221	ddx42	99	71.534	ENSAPLG00000010544	DDX42	99	71.022	Anas_platyrhynchos
ENSSDUG00000022221	ddx42	99	72.281	ENSACAG00000003994	DDX42	99	71.550	Anolis_carolinensis
ENSSDUG00000022221	ddx42	99	72.287	ENSANAG00000035693	DDX42	99	76.151	Aotus_nancymaae
ENSSDUG00000022221	ddx42	100	92.123	ENSACLG00000025113	ddx42	100	92.779	Astatotilapia_calliptera
ENSSDUG00000022221	ddx42	88	81.709	ENSAMXG00000011435	ddx42	100	77.686	Astyanax_mexicanus
ENSSDUG00000022221	ddx42	99	70.964	ENSBTAG00000021058	DDX42	92	79.522	Bos_taurus
ENSSDUG00000022221	ddx42	66	53.605	WBGene00008119	C46F11.4	79	53.178	Caenorhabditis_elegans
ENSSDUG00000022221	ddx42	99	72.392	ENSCJAG00000019649	DDX42	99	80.538	Callithrix_jacchus
ENSSDUG00000022221	ddx42	99	72.046	ENSCAFG00000012818	DDX42	99	71.670	Canis_familiaris
ENSSDUG00000022221	ddx42	99	72.046	ENSCAFG00020026631	DDX42	99	71.670	Canis_lupus_dingo
ENSSDUG00000022221	ddx42	99	72.961	ENSCHIG00000014431	DDX42	100	72.017	Capra_hircus
ENSSDUG00000022221	ddx42	100	71.204	ENSTSYG00000001380	DDX42	99	71.172	Carlito_syrichta
ENSSDUG00000022221	ddx42	74	60.475	ENSCAPG00000013621	DDX42	94	60.475	Cavia_aperea
ENSSDUG00000022221	ddx42	99	72.140	ENSCPOG00000005633	DDX42	99	71.962	Cavia_porcellus
ENSSDUG00000022221	ddx42	99	68.153	ENSCCAG00000020612	DDX42	92	79.790	Cebus_capucinus
ENSSDUG00000022221	ddx42	99	71.816	ENSCATG00000030490	DDX42	99	71.902	Cercocebus_atys
ENSSDUG00000022221	ddx42	99	73.355	ENSCLAG00000003497	DDX42	99	72.766	Chinchilla_lanigera
ENSSDUG00000022221	ddx42	99	68.295	ENSCSAG00000003914	DDX42	99	67.250	Chlorocebus_sabaeus
ENSSDUG00000022221	ddx42	63	85.714	ENSCHOG00000006241	DDX42	61	87.273	Choloepus_hoffmanni
ENSSDUG00000022221	ddx42	99	72.680	ENSCPBG00000026682	DDX42	99	71.130	Chrysemys_picta_bellii
ENSSDUG00000022221	ddx42	50	65.859	ENSCING00000001837	-	97	65.859	Ciona_intestinalis
ENSSDUG00000022221	ddx42	99	71.816	ENSCANG00000034663	DDX42	94	80.208	Colobus_angolensis_palliatus
ENSSDUG00000022221	ddx42	99	72.381	ENSCGRG00001009775	Ddx42	99	71.580	Cricetulus_griseus_chok1gshd
ENSSDUG00000022221	ddx42	99	72.381	ENSCGRG00000011718	Ddx42	99	71.580	Cricetulus_griseus_crigri
ENSSDUG00000022221	ddx42	100	87.595	ENSCSEG00000021574	ddx42	100	88.139	Cynoglossus_semilaevis
ENSSDUG00000022221	ddx42	100	86.842	ENSCVAG00000011404	ddx42	100	88.596	Cyprinodon_variegatus
ENSSDUG00000022221	ddx42	100	79.402	ENSDARG00000037928	ddx42	100	79.127	Danio_rerio
ENSSDUG00000022221	ddx42	99	70.085	ENSDNOG00000007961	DDX42	99	70.160	Dasypus_novemcinctus
ENSSDUG00000022221	ddx42	99	65.856	ENSDORG00000004199	Ddx42	99	65.851	Dipodomys_ordii
ENSSDUG00000022221	ddx42	68	60.356	FBgn0036104	CG6418	84	57.997	Drosophila_melanogaster
ENSSDUG00000022221	ddx42	85	72.194	ENSEBUG00000001155	ddx42	93	71.556	Eptatretus_burgeri
ENSSDUG00000022221	ddx42	100	71.957	ENSEASG00005013089	DDX42	94	79.674	Equus_asinus_asinus
ENSSDUG00000022221	ddx42	99	71.882	ENSECAG00000022684	DDX42	99	71.008	Equus_caballus
ENSSDUG00000022221	ddx42	60	89.189	ENSEEUG00000009144	DDX42	73	94.286	Erinaceus_europaeus
ENSSDUG00000022221	ddx42	100	80.892	ENSELUG00000020593	ddx42	100	79.831	Esox_lucius
ENSSDUG00000022221	ddx42	99	71.459	ENSFCAG00000003499	DDX42	99	71.882	Felis_catus
ENSSDUG00000022221	ddx42	98	71.225	ENSFALG00000004675	DDX42	74	75.566	Ficedula_albicollis
ENSSDUG00000022221	ddx42	99	72.910	ENSFDAG00000020516	DDX42	99	71.762	Fukomys_damarensis
ENSSDUG00000022221	ddx42	100	86.732	ENSFHEG00000023290	ddx42	100	88.487	Fundulus_heteroclitus
ENSSDUG00000022221	ddx42	88	83.287	ENSGMOG00000004595	ddx42	88	83.287	Gadus_morhua
ENSSDUG00000022221	ddx42	99	70.533	ENSGALG00000000581	DDX42	99	70.324	Gallus_gallus
ENSSDUG00000022221	ddx42	95	86.590	ENSGAFG00000011846	ddx42	94	88.426	Gambusia_affinis
ENSSDUG00000022221	ddx42	100	83.969	ENSGACG00000009782	ddx42	100	83.860	Gasterosteus_aculeatus
ENSSDUG00000022221	ddx42	99	72.025	ENSGAGG00000024411	DDX42	99	70.785	Gopherus_agassizii
ENSSDUG00000022221	ddx42	99	71.712	ENSGGOG00000006779	DDX42	92	79.970	Gorilla_gorilla
ENSSDUG00000022221	ddx42	100	92.013	ENSHBUG00000008705	ddx42	100	92.670	Haplochromis_burtoni
ENSSDUG00000022221	ddx42	99	69.068	ENSHGLG00000010024	DDX42	99	68.415	Heterocephalus_glaber_female
ENSSDUG00000022221	ddx42	99	71.941	ENSHGLG00100004479	-	99	71.670	Heterocephalus_glaber_male
ENSSDUG00000022221	ddx42	89	56.638	ENSHGLG00100007138	-	88	55.542	Heterocephalus_glaber_male
ENSSDUG00000022221	ddx42	100	79.737	ENSHCOG00000003357	ddx42	100	79.353	Hippocampus_comes
ENSSDUG00000022221	ddx42	100	77.381	ENSIPUG00000013327	ddx42	100	76.997	Ictalurus_punctatus
ENSSDUG00000022221	ddx42	99	72.381	ENSSTOG00000008922	DDX42	99	72.081	Ictidomys_tridecemlineatus
ENSSDUG00000022221	ddx42	99	72.737	ENSJJAG00000011727	Ddx42	99	72.776	Jaculus_jaculus
ENSSDUG00000022221	ddx42	100	87.744	ENSKMAG00000009914	ddx42	100	90.502	Kryptolebias_marmoratus
ENSSDUG00000022221	ddx42	100	80.719	ENSLBEG00000004687	ddx42	100	81.985	Labrus_bergylta
ENSSDUG00000022221	ddx42	99	73.077	ENSLACG00000013476	DDX42	97	74.540	Latimeria_chalumnae
ENSSDUG00000022221	ddx42	100	81.210	ENSLOCG00000011764	ddx42	100	80.454	Lepisosteus_oculatus
ENSSDUG00000022221	ddx42	99	73.093	ENSLAFG00000003249	DDX42	99	72.689	Loxodonta_africana
ENSSDUG00000022221	ddx42	99	71.921	ENSMFAG00000031356	DDX42	99	71.025	Macaca_fascicularis
ENSSDUG00000022221	ddx42	99	72.497	ENSMMUG00000016762	DDX42	91	80.120	Macaca_mulatta
ENSSDUG00000022221	ddx42	99	71.921	ENSMNEG00000038250	DDX42	99	71.025	Macaca_nemestrina
ENSSDUG00000022221	ddx42	99	71.473	ENSMLEG00000043080	DDX42	99	70.393	Mandrillus_leucophaeus
ENSSDUG00000022221	ddx42	91	93.149	ENSMAMG00000021888	ddx42	98	90.850	Mastacembelus_armatus
ENSSDUG00000022221	ddx42	100	92.123	ENSMZEG00005023103	ddx42	100	92.779	Maylandia_zebra
ENSSDUG00000022221	ddx42	99	70.742	ENSMGAG00000001822	DDX42	99	70.324	Meleagris_gallopavo
ENSSDUG00000022221	ddx42	73	80.775	ENSMAUG00000020774	-	88	80.328	Mesocricetus_auratus
ENSSDUG00000022221	ddx42	99	72.135	ENSMICG00000009952	DDX42	99	71.564	Microcebus_murinus
ENSSDUG00000022221	ddx42	99	72.660	ENSMOCG00000015504	Ddx42	99	71.672	Microtus_ochrogaster
ENSSDUG00000022221	ddx42	92	87.377	ENSMMOG00000016963	ddx42	87	86.675	Mola_mola
ENSSDUG00000022221	ddx42	51	84.648	ENSMODG00000009917	-	98	85.288	Monodelphis_domestica
ENSSDUG00000022221	ddx42	100	91.209	ENSMALG00000007800	ddx42	100	91.648	Monopterus_albus
ENSSDUG00000022221	ddx42	99	72.293	MGP_CAROLIEiJ_G0017314	Ddx42	99	72.021	Mus_caroli
ENSSDUG00000022221	ddx42	99	72.293	ENSMUSG00000020705	Ddx42	99	72.021	Mus_musculus
ENSSDUG00000022221	ddx42	74	86.033	MGP_PahariEiJ_G0018444	-	95	86.140	Mus_pahari
ENSSDUG00000022221	ddx42	99	72.399	MGP_SPRETEiJ_G0018158	Ddx42	99	72.128	Mus_spretus
ENSSDUG00000022221	ddx42	99	71.072	ENSMPUG00000014921	DDX42	99	70.877	Mustela_putorius_furo
ENSSDUG00000022221	ddx42	99	69.836	ENSMLUG00000011645	DDX42	99	69.286	Myotis_lucifugus
ENSSDUG00000022221	ddx42	99	73.426	ENSNGAG00000021897	Ddx42	99	72.912	Nannospalax_galili
ENSSDUG00000022221	ddx42	100	90.481	ENSNBRG00000004466	ddx42	100	91.357	Neolamprologus_brichardi
ENSSDUG00000022221	ddx42	99	73.016	ENSNLEG00000004248	DDX42	94	80.120	Nomascus_leucogenys
ENSSDUG00000022221	ddx42	77	70.389	ENSMEUG00000013227	-	71	69.712	Notamacropus_eugenii
ENSSDUG00000022221	ddx42	99	71.549	ENSOPRG00000014960	DDX42	99	70.855	Ochotona_princeps
ENSSDUG00000022221	ddx42	99	69.280	ENSODEG00000007810	DDX42	99	68.830	Octodon_degus
ENSSDUG00000022221	ddx42	100	92.013	ENSONIG00000000734	ddx42	100	92.998	Oreochromis_niloticus
ENSSDUG00000022221	ddx42	59	82.963	ENSOANG00000000265	DDX42	100	82.963	Ornithorhynchus_anatinus
ENSSDUG00000022221	ddx42	95	73.667	ENSOCUG00000004304	DDX42	86	73.791	Oryctolagus_cuniculus
ENSSDUG00000022221	ddx42	100	86.718	ENSORLG00000002395	ddx42	98	88.474	Oryzias_latipes
ENSSDUG00000022221	ddx42	100	88.816	ENSORLG00020011621	ddx42	100	88.596	Oryzias_latipes_hni
ENSSDUG00000022221	ddx42	100	88.925	ENSORLG00015004487	ddx42	100	88.706	Oryzias_latipes_hsok
ENSSDUG00000022221	ddx42	100	88.061	ENSOMEG00000020093	ddx42	100	89.047	Oryzias_melastigma
ENSSDUG00000022221	ddx42	99	71.970	ENSOGAG00000006872	DDX42	99	71.444	Otolemur_garnettii
ENSSDUG00000022221	ddx42	99	71.118	ENSOARG00000013540	DDX42	99	71.443	Ovis_aries
ENSSDUG00000022221	ddx42	99	71.816	ENSPPAG00000007496	DDX42	92	80.271	Pan_paniscus
ENSSDUG00000022221	ddx42	99	71.459	ENSPPRG00000002740	DDX42	99	71.776	Panthera_pardus
ENSSDUG00000022221	ddx42	99	71.564	ENSPTIG00000009932	DDX42	99	71.882	Panthera_tigris_altaica
ENSSDUG00000022221	ddx42	99	71.816	ENSPTRG00000009523	DDX42	92	80.271	Pan_troglodytes
ENSSDUG00000022221	ddx42	99	71.921	ENSPANG00000020990	DDX42	99	72.009	Papio_anubis
ENSSDUG00000022221	ddx42	100	78.775	ENSPKIG00000002901	ddx42	100	77.826	Paramormyrops_kingsleyae
ENSSDUG00000022221	ddx42	86	79.723	ENSPSIG00000010289	DDX42	95	79.093	Pelodiscus_sinensis
ENSSDUG00000022221	ddx42	91	84.920	ENSPMGG00000009323	ddx42	100	81.788	Periophthalmus_magnuspinnatus
ENSSDUG00000022221	ddx42	99	72.304	ENSPEMG00000006755	Ddx42	99	71.398	Peromyscus_maniculatus_bairdii
ENSSDUG00000022221	ddx42	86	70.992	ENSPMAG00000005580	ddx42	99	72.021	Petromyzon_marinus
ENSSDUG00000022221	ddx42	99	72.100	ENSPCIG00000009093	DDX42	99	71.369	Phascolarctos_cinereus
ENSSDUG00000022221	ddx42	100	84.648	ENSPFOG00000014104	ddx42	100	87.073	Poecilia_formosa
ENSSDUG00000022221	ddx42	100	84.435	ENSPLAG00000010522	ddx42	100	86.859	Poecilia_latipinna
ENSSDUG00000022221	ddx42	100	84.958	ENSPMEG00000010744	ddx42	100	86.335	Poecilia_mexicana
ENSSDUG00000022221	ddx42	100	83.753	ENSPREG00000009926	ddx42	100	85.609	Poecilia_reticulata
ENSSDUG00000022221	ddx42	99	69.375	ENSPPYG00000008531	DDX42	99	69.167	Pongo_abelii
ENSSDUG00000022221	ddx42	92	67.277	ENSPCAG00000002474	DDX42	100	66.629	Procavia_capensis
ENSSDUG00000022221	ddx42	99	62.473	ENSPCOG00000001559	DDX42	92	72.897	Propithecus_coquereli
ENSSDUG00000022221	ddx42	99	69.547	ENSPVAG00000000160	DDX42	99	68.503	Pteropus_vampyrus
ENSSDUG00000022221	ddx42	86	90.145	ENSPNYG00000013954	ddx42	97	90.670	Pundamilia_nyererei
ENSSDUG00000022221	ddx42	97	76.196	ENSPNAG00000017352	ddx42	100	79.645	Pygocentrus_nattereri
ENSSDUG00000022221	ddx42	99	72.505	ENSRNOG00000009474	Ddx42	99	72.128	Rattus_norvegicus
ENSSDUG00000022221	ddx42	99	71.816	ENSRBIG00000004781	DDX42	94	80.328	Rhinopithecus_bieti
ENSSDUG00000022221	ddx42	99	71.816	ENSRROG00000029794	DDX42	99	71.902	Rhinopithecus_roxellana
ENSSDUG00000022221	ddx42	99	72.046	ENSSBOG00000029624	DDX42	92	79.790	Saimiri_boliviensis_boliviensis
ENSSDUG00000022221	ddx42	71	49.323	ENSSHAG00000007919	-	99	49.321	Sarcophilus_harrisii
ENSSDUG00000022221	ddx42	99	71.832	ENSSHAG00000012896	-	99	70.894	Sarcophilus_harrisii
ENSSDUG00000022221	ddx42	82	88.579	ENSSFOG00015014064	ddx42	80	88.446	Scleropages_formosus
ENSSDUG00000022221	ddx42	100	89.542	ENSSMAG00000009077	ddx42	100	90.374	Scophthalmus_maximus
ENSSDUG00000022221	ddx42	100	97.427	ENSSLDG00000018483	ddx42	100	97.427	Seriola_lalandi_dorsalis
ENSSDUG00000022221	ddx42	99	70.890	ENSSARG00000009847	DDX42	99	70.471	Sorex_araneus
ENSSDUG00000022221	ddx42	99	72.987	ENSSPUG00000018806	DDX42	99	71.714	Sphenodon_punctatus
ENSSDUG00000022221	ddx42	100	93.217	ENSSPAG00000013055	ddx42	100	94.420	Stegastes_partitus
ENSSDUG00000022221	ddx42	85	70.624	ENSSSCG00000017289	DDX42	97	70.782	Sus_scrofa
ENSSDUG00000022221	ddx42	99	71.911	ENSTGUG00000001931	DDX42	99	71.534	Taeniopygia_guttata
ENSSDUG00000022221	ddx42	100	84.742	ENSTRUG00000010711	ddx42	99	90.583	Takifugu_rubripes
ENSSDUG00000022221	ddx42	83	77.675	ENSTBEG00000010159	DDX42	92	85.220	Tupaia_belangeri
ENSSDUG00000022221	ddx42	99	71.667	ENSTTRG00000006962	DDX42	99	71.099	Tursiops_truncatus
ENSSDUG00000022221	ddx42	99	72.345	ENSUAMG00000007321	DDX42	99	72.650	Ursus_americanus
ENSSDUG00000022221	ddx42	99	72.718	ENSUMAG00000017438	DDX42	99	72.322	Ursus_maritimus
ENSSDUG00000022221	ddx42	94	70.423	ENSVPAG00000009633	DDX42	94	76.159	Vicugna_pacos
ENSSDUG00000022221	ddx42	99	71.941	ENSVVUG00000006095	DDX42	99	71.882	Vulpes_vulpes
ENSSDUG00000022221	ddx42	100	72.327	ENSXETG00000003245	ddx42	100	70.650	Xenopus_tropicalis
ENSSDUG00000022221	ddx42	85	88.296	ENSXCOG00000017560	ddx42	97	89.727	Xiphophorus_couchianus
ENSSDUG00000022221	ddx42	100	89.011	ENSXMAG00000008138	ddx42	100	90.110	Xiphophorus_maculatus