EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000022228 (Gene tree)
Gene ID: -
Gene Symbol: rasef
Alias: si:ch73-275j21.1
Full Name: RAS and EF-hand domain containing
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 18187 bases
Position: chrBDQW01000290.1:1911064-1929250
Accession: ZDB-GENE-081105-157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000030864	MMR_HSR1	PF01926.23	3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000031400	-	1908	-	ENSSDUP00000030864	635 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000022228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022228's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000022228	rasef	91	36.193	ENSSDUG00000011478	zgc:162879	65	63.291
ENSSDUG00000022228	rasef	66	48.193	ENSSDUG00000000911	CRACR2A	61	49.057

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022228	rasef	92	44.522	ENSG00000165105	RASEF	94	45.028	Homo_sapiens
ENSSDUG00000022228	rasef	91	79.062	ENSAPOG00000024369	rasef	94	73.524	Acanthochromis_polyacanthus
ENSSDUG00000022228	rasef	91	45.494	ENSAMEG00000009467	RASEF	93	45.468	Ailuropoda_melanoleuca
ENSSDUG00000022228	rasef	93	75.080	ENSACIG00000005549	rasef	97	74.838	Amphilophus_citrinellus
ENSSDUG00000022228	rasef	91	76.208	ENSAOCG00000011464	rasef	95	70.952	Amphiprion_ocellaris
ENSSDUG00000022228	rasef	93	65.051	ENSAPEG00000003461	rasef	95	64.549	Amphiprion_percula
ENSSDUG00000022228	rasef	93	73.897	ENSATEG00000015032	rasef	90	73.897	Anabas_testudineus
ENSSDUG00000022228	rasef	71	56.592	ENSAPLG00000013969	RASEF	73	57.096	Anas_platyrhynchos
ENSSDUG00000022228	rasef	87	59.333	ENSACAG00000002155	RASEF	81	59.122	Anolis_carolinensis
ENSSDUG00000022228	rasef	92	44.382	ENSANAG00000035226	RASEF	94	44.633	Aotus_nancymaae
ENSSDUG00000022228	rasef	95	79.779	ENSACLG00000017818	rasef	85	79.779	Astatotilapia_calliptera
ENSSDUG00000022228	rasef	86	59.164	ENSAMXG00000011411	rasef	91	47.941	Astyanax_mexicanus
ENSSDUG00000022228	rasef	91	47.750	ENSBTAG00000021751	RASEF	93	47.445	Bos_taurus
ENSSDUG00000022228	rasef	87	57.605	ENSCJAG00000003547	RASEF	94	44.837	Callithrix_jacchus
ENSSDUG00000022228	rasef	89	49.153	ENSCAFG00000001453	RASEF	86	44.568	Canis_familiaris
ENSSDUG00000022228	rasef	92	47.973	ENSCAFG00020023859	RASEF	94	45.056	Canis_lupus_dingo
ENSSDUG00000022228	rasef	92	45.007	ENSCHIG00000020336	RASEF	94	45.120	Capra_hircus
ENSSDUG00000022228	rasef	58	58.117	ENSTSYG00000006987	RASEF	92	43.662	Carlito_syrichta
ENSSDUG00000022228	rasef	67	42.161	ENSCAPG00000010585	-	99	42.161	Cavia_aperea
ENSSDUG00000022228	rasef	71	55.814	ENSCPOG00000005004	RASEF	93	45.115	Cavia_porcellus
ENSSDUG00000022228	rasef	92	44.163	ENSCCAG00000031624	RASEF	94	44.837	Cebus_capucinus
ENSSDUG00000022228	rasef	64	42.453	ENSCLAG00000004622	-	85	42.353	Chinchilla_lanigera
ENSSDUG00000022228	rasef	92	45.275	ENSCSAG00000007663	RASEF	94	44.936	Chlorocebus_sabaeus
ENSSDUG00000022228	rasef	79	46.362	ENSCHOG00000001831	RASEF	96	45.997	Choloepus_hoffmanni
ENSSDUG00000022228	rasef	91	55.193	ENSCPBG00000019037	RASEF	85	54.167	Chrysemys_picta_bellii
ENSSDUG00000022228	rasef	92	44.101	ENSCANG00000034081	RASEF	94	44.460	Colobus_angolensis_palliatus
ENSSDUG00000022228	rasef	70	54.934	ENSCGRG00001001324	Rasef	77	54.667	Cricetulus_griseus_chok1gshd
ENSSDUG00000022228	rasef	65	54.934	ENSCGRG00000006455	Rasef	76	54.667	Cricetulus_griseus_crigri
ENSSDUG00000022228	rasef	89	65.353	ENSCSEG00000017898	rasef	92	65.353	Cynoglossus_semilaevis
ENSSDUG00000022228	rasef	93	77.574	ENSCVAG00000006168	rasef	84	77.574	Cyprinodon_variegatus
ENSSDUG00000022228	rasef	89	61.218	ENSDARG00000076250	rasef	84	57.986	Danio_rerio
ENSSDUG00000022228	rasef	92	45.787	ENSDNOG00000006002	RASEF	85	45.403	Dasypus_novemcinctus
ENSSDUG00000022228	rasef	63	56.494	ENSDORG00000015570	Rasef	75	56.250	Dipodomys_ordii
ENSSDUG00000022228	rasef	67	74.699	ENSEBUG00000012629	rasef	65	74.691	Eptatretus_burgeri
ENSSDUG00000022228	rasef	50	62.644	ENSEBUG00000012179	rasef	55	62.353	Eptatretus_burgeri
ENSSDUG00000022228	rasef	87	57.792	ENSEASG00005015967	RASEF	81	57.237	Equus_asinus_asinus
ENSSDUG00000022228	rasef	87	57.792	ENSECAG00000000324	RASEF	81	57.237	Equus_caballus
ENSSDUG00000022228	rasef	76	46.570	ENSEEUG00000008455	RASEF	99	46.364	Erinaceus_europaeus
ENSSDUG00000022228	rasef	92	45.557	ENSFCAG00000002416	RASEF	94	45.455	Felis_catus
ENSSDUG00000022228	rasef	71	59.283	ENSFALG00000003611	RASEF	76	57.895	Ficedula_albicollis
ENSSDUG00000022228	rasef	71	56.250	ENSFDAG00000013428	RASEF	77	56.000	Fukomys_damarensis
ENSSDUG00000022228	rasef	89	80.451	ENSFHEG00000022470	rasef	91	63.622	Fundulus_heteroclitus
ENSSDUG00000022228	rasef	69	85.965	ENSGMOG00000010090	rasef	99	57.953	Gadus_morhua
ENSSDUG00000022228	rasef	87	57.980	ENSGALG00000012576	RASEF	82	58.086	Gallus_gallus
ENSSDUG00000022228	rasef	93	77.206	ENSGAFG00000013735	rasef	92	52.515	Gambusia_affinis
ENSSDUG00000022228	rasef	93	60.420	ENSGACG00000007528	rasef	82	73.285	Gasterosteus_aculeatus
ENSSDUG00000022228	rasef	86	59.016	ENSGAGG00000007338	RASEF	85	53.869	Gopherus_agassizii
ENSSDUG00000022228	rasef	92	44.663	ENSGGOG00000006651	RASEF	94	45.028	Gorilla_gorilla
ENSSDUG00000022228	rasef	95	79.779	ENSHBUG00000010345	rasef	85	79.779	Haplochromis_burtoni
ENSSDUG00000022228	rasef	97	43.466	ENSHGLG00000000399	RASEF	99	43.466	Heterocephalus_glaber_female
ENSSDUG00000022228	rasef	81	44.759	ENSHGLG00100008043	RASEF	99	44.759	Heterocephalus_glaber_male
ENSSDUG00000022228	rasef	93	57.100	ENSHCOG00000010976	rasef	94	56.143	Hippocampus_comes
ENSSDUG00000022228	rasef	87	59.807	ENSIPUG00000008768	rasef	78	59.283	Ictalurus_punctatus
ENSSDUG00000022228	rasef	92	44.696	ENSSTOG00000004311	RASEF	94	44.950	Ictidomys_tridecemlineatus
ENSSDUG00000022228	rasef	76	47.120	ENSJJAG00000023215	Rasef	93	46.749	Jaculus_jaculus
ENSSDUG00000022228	rasef	93	71.062	ENSKMAG00000021106	rasef	76	71.062	Kryptolebias_marmoratus
ENSSDUG00000022228	rasef	93	76.471	ENSLBEG00000021098	-	93	67.690	Labrus_bergylta
ENSSDUG00000022228	rasef	87	58.199	ENSLACG00000010849	RASEF	80	59.667	Latimeria_chalumnae
ENSSDUG00000022228	rasef	92	42.563	ENSLOCG00000002094	rasef	93	42.097	Lepisosteus_oculatus
ENSSDUG00000022228	rasef	71	58.416	ENSLAFG00000010552	RASEF	77	57.860	Loxodonta_africana
ENSSDUG00000022228	rasef	92	45.084	ENSMFAG00000046414	RASEF	94	45.170	Macaca_fascicularis
ENSSDUG00000022228	rasef	92	44.895	ENSMNEG00000044341	RASEF	94	44.979	Macaca_nemestrina
ENSSDUG00000022228	rasef	92	45.084	ENSMLEG00000034579	RASEF	94	45.170	Mandrillus_leucophaeus
ENSSDUG00000022228	rasef	83	74.632	ENSMAMG00000001536	rasef	86	74.632	Mastacembelus_armatus
ENSSDUG00000022228	rasef	93	74.793	ENSMZEG00005004819	rasef	98	75.421	Maylandia_zebra
ENSSDUG00000022228	rasef	71	56.066	ENSMAUG00000010820	Rasef	77	55.814	Mesocricetus_auratus
ENSSDUG00000022228	rasef	85	57.143	ENSMICG00000011836	RASEF	81	56.579	Microcebus_murinus
ENSSDUG00000022228	rasef	77	44.732	ENSMOCG00000000943	Rasef	93	42.642	Microtus_ochrogaster
ENSSDUG00000022228	rasef	92	70.892	ENSMMOG00000000102	rasef	96	70.866	Mola_mola
ENSSDUG00000022228	rasef	92	44.147	ENSMODG00000009037	RASEF	94	43.972	Monodelphis_domestica
ENSSDUG00000022228	rasef	93	62.012	ENSMALG00000009830	rasef	95	62.064	Monopterus_albus
ENSSDUG00000022228	rasef	78	52.367	MGP_CAROLIEiJ_G0026109	Rasef	82	52.071	Mus_caroli
ENSSDUG00000022228	rasef	91	52.663	ENSMUSG00000043003	Rasef	85	52.367	Mus_musculus
ENSSDUG00000022228	rasef	73	55.375	MGP_PahariEiJ_G0028447	Rasef	82	50.000	Mus_pahari
ENSSDUG00000022228	rasef	78	52.367	MGP_SPRETEiJ_G0027075	Rasef	82	52.071	Mus_spretus
ENSSDUG00000022228	rasef	70	45.403	ENSMPUG00000013070	RASEF	93	44.991	Mustela_putorius_furo
ENSSDUG00000022228	rasef	92	44.366	ENSMLUG00000013108	RASEF	94	44.618	Myotis_lucifugus
ENSSDUG00000022228	rasef	70	45.421	ENSNGAG00000014878	Rasef	93	44.633	Nannospalax_galili
ENSSDUG00000022228	rasef	93	75.372	ENSNBRG00000012335	rasef	98	75.208	Neolamprologus_brichardi
ENSSDUG00000022228	rasef	92	43.820	ENSNLEG00000003245	RASEF	94	44.744	Nomascus_leucogenys
ENSSDUG00000022228	rasef	87	55.844	ENSMEUG00000016412	RASEF	81	55.263	Notamacropus_eugenii
ENSSDUG00000022228	rasef	78	53.443	ENSOPRG00000002742	-	70	53.115	Ochotona_princeps
ENSSDUG00000022228	rasef	95	79.044	ENSONIG00000015021	rasef	85	79.044	Oreochromis_niloticus
ENSSDUG00000022228	rasef	87	56.106	ENSOANG00000010379	RASEF	81	55.853	Ornithorhynchus_anatinus
ENSSDUG00000022228	rasef	92	44.163	ENSOCUG00000001548	RASEF	94	43.989	Oryctolagus_cuniculus
ENSSDUG00000022228	rasef	63	68.314	ENSORLG00000005076	rasef	83	73.897	Oryzias_latipes
ENSSDUG00000022228	rasef	63	68.314	ENSORLG00020020049	rasef	83	73.897	Oryzias_latipes_hni
ENSSDUG00000022228	rasef	93	62.857	ENSORLG00015008479	rasef	91	57.692	Oryzias_latipes_hsok
ENSSDUG00000022228	rasef	93	75.000	ENSOMEG00000023457	rasef	88	75.000	Oryzias_melastigma
ENSSDUG00000022228	rasef	77	46.609	ENSOGAG00000012724	RASEF	93	46.410	Otolemur_garnettii
ENSSDUG00000022228	rasef	92	45.098	ENSOARG00000009073	RASEF	88	45.262	Ovis_aries
ENSSDUG00000022228	rasef	92	45.640	ENSPPAG00000042152	RASEF	94	46.471	Pan_paniscus
ENSSDUG00000022228	rasef	79	47.892	ENSPPRG00000008487	RASEF	94	45.545	Panthera_pardus
ENSSDUG00000022228	rasef	79	47.804	ENSPTIG00000006676	RASEF	91	43.687	Panthera_tigris_altaica
ENSSDUG00000022228	rasef	92	45.640	ENSPTRG00000021052	RASEF	94	46.324	Pan_troglodytes
ENSSDUG00000022228	rasef	92	45.365	ENSPANG00000024899	RASEF	94	45.028	Papio_anubis
ENSSDUG00000022228	rasef	72	57.705	ENSPSIG00000017699	RASEF	74	57.475	Pelodiscus_sinensis
ENSSDUG00000022228	rasef	98	58.260	ENSPMGG00000015499	rasef	86	92.157	Periophthalmus_magnuspinnatus
ENSSDUG00000022228	rasef	71	55.592	ENSPEMG00000002797	Rasef	83	52.836	Peromyscus_maniculatus_bairdii
ENSSDUG00000022228	rasef	66	70.238	ENSPMAG00000001634	rasef	64	70.122	Petromyzon_marinus
ENSSDUG00000022228	rasef	87	56.494	ENSPCIG00000027655	RASEF	81	55.921	Phascolarctos_cinereus
ENSSDUG00000022228	rasef	93	60.597	ENSPFOG00000018924	rasef	94	59.712	Poecilia_formosa
ENSSDUG00000022228	rasef	77	61.397	ENSPLAG00000022907	RASEF	90	60.261	Poecilia_latipinna
ENSSDUG00000022228	rasef	93	78.309	ENSPMEG00000006546	rasef	85	78.309	Poecilia_mexicana
ENSSDUG00000022228	rasef	93	77.206	ENSPREG00000018728	rasef	92	60.215	Poecilia_reticulata
ENSSDUG00000022228	rasef	92	44.633	ENSPPYG00000019320	RASEF	94	44.460	Pongo_abelii
ENSSDUG00000022228	rasef	92	45.007	ENSPCOG00000022979	RASEF	94	45.403	Propithecus_coquereli
ENSSDUG00000022228	rasef	91	44.696	ENSPVAG00000003682	RASEF	93	45.207	Pteropus_vampyrus
ENSSDUG00000022228	rasef	93	69.492	ENSPNYG00000010579	rasef	93	69.147	Pundamilia_nyererei
ENSSDUG00000022228	rasef	92	39.742	ENSPNAG00000016447	rasef	94	39.538	Pygocentrus_nattereri
ENSSDUG00000022228	rasef	92	45.199	ENSRNOG00000024190	Rasef	94	44.183	Rattus_norvegicus
ENSSDUG00000022228	rasef	92	45.084	ENSRBIG00000039516	RASEF	94	45.028	Rhinopithecus_bieti
ENSSDUG00000022228	rasef	92	45.035	ENSRROG00000044397	RASEF	98	44.726	Rhinopithecus_roxellana
ENSSDUG00000022228	rasef	92	43.741	ENSSBOG00000029298	RASEF	94	43.423	Saimiri_boliviensis_boliviensis
ENSSDUG00000022228	rasef	87	56.536	ENSSFOG00015009014	rasef	81	56.291	Scleropages_formosus
ENSSDUG00000022228	rasef	93	65.823	ENSSMAG00000000942	rasef	95	62.996	Scophthalmus_maximus
ENSSDUG00000022228	rasef	93	82.432	ENSSLDG00000001784	rasef	89	82.432	Seriola_lalandi_dorsalis
ENSSDUG00000022228	rasef	92	45.331	ENSSPUG00000002899	RASEF	93	45.358	Sphenodon_punctatus
ENSSDUG00000022228	rasef	93	68.354	ENSSPAG00000002442	rasef	92	68.354	Stegastes_partitus
ENSSDUG00000022228	rasef	79	48.393	ENSSSCG00000040707	-	87	48.041	Sus_scrofa
ENSSDUG00000022228	rasef	87	58.632	ENSTGUG00000003216	RASEF	80	57.566	Taeniopygia_guttata
ENSSDUG00000022228	rasef	92	75.217	ENSTRUG00000011541	rasef	86	75.217	Takifugu_rubripes
ENSSDUG00000022228	rasef	88	68.690	ENSTNIG00000006010	rasef	82	68.608	Tetraodon_nigroviridis
ENSSDUG00000022228	rasef	87	50.649	ENSTTRG00000002061	RASEF	86	47.941	Tursiops_truncatus
ENSSDUG00000022228	rasef	92	46.087	ENSUAMG00000021591	RASEF	94	45.455	Ursus_americanus
ENSSDUG00000022228	rasef	77	47.130	ENSUMAG00000004670	RASEF	88	46.935	Ursus_maritimus
ENSSDUG00000022228	rasef	77	47.478	ENSVVUG00000029736	RASEF	91	46.946	Vulpes_vulpes
ENSSDUG00000022228	rasef	87	54.984	ENSXETG00000016758	mgc147600	94	43.860	Xenopus_tropicalis
ENSSDUG00000022228	rasef	76	59.023	ENSXCOG00000005178	rasef	83	58.523	Xiphophorus_couchianus
ENSSDUG00000022228	rasef	93	77.574	ENSXMAG00000015129	rasef	85	77.574	Xiphophorus_maculatus