EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000022255 (Gene tree)
Gene ID: 111230904
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein MEX3B-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 12302 bases
Position: chrBDQW01000290.1:2050473-2062774
Accession: 111230904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000030913	KH_1	PF00013.29	8.1e-26	1	2
ENSSDUP00000030913	KH_1	PF00013.29	8.1e-26	2	2
ENSSDUP00000030908	KH_1	PF00013.29	1.7e-25	1	2
ENSSDUP00000030908	KH_1	PF00013.29	1.7e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000031449	-	1536	-	ENSSDUP00000030913	511 (aa)	-	-
ENSSDUT00000031444	-	5780	XM_022757795	ENSSDUP00000030908	691 (aa)	XP_022613516	UPI000BBEB5B4

Gene Model

Click here to download ENSSDUG00000022255's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022255's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000022255	-	77	72.388	ENSSDUG00000013254	mex3b	91	51.362
ENSSDUG00000022255	-	69	78.866	ENSSDUG00000015559	MEX3D	71	76.168

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022255	-	52	82.381	ENSG00000183496	MEX3B	91	50.551	Homo_sapiens
ENSSDUG00000022255	-	92	54.927	ENSAPOG00000006457	mex3b	97	54.357	Acanthochromis_polyacanthus
ENSSDUG00000022255	-	100	89.755	ENSAPOG00000024248	-	100	88.889	Acanthochromis_polyacanthus
ENSSDUG00000022255	-	92	54.393	ENSACIG00000017783	mex3b	89	53.878	Amphilophus_citrinellus
ENSSDUG00000022255	-	97	73.293	ENSACIG00000005655	-	94	71.480	Amphilophus_citrinellus
ENSSDUG00000022255	-	100	89.755	ENSAOCG00000021347	-	100	88.889	Amphiprion_ocellaris
ENSSDUG00000022255	-	92	55.346	ENSAOCG00000023903	mex3b	87	54.832	Amphiprion_ocellaris
ENSSDUG00000022255	-	100	89.466	ENSAPEG00000003579	-	100	88.600	Amphiprion_percula
ENSSDUG00000022255	-	92	55.136	ENSAPEG00000000263	mex3b	87	54.622	Amphiprion_percula
ENSSDUG00000022255	-	77	72.761	ENSATEG00000012352	mex3b	72	71.587	Anabas_testudineus
ENSSDUG00000022255	-	100	85.818	ENSATEG00000015187	-	100	85.239	Anabas_testudineus
ENSSDUG00000022255	-	91	49.482	ENSACAG00000011072	MEX3B	99	48.000	Anolis_carolinensis
ENSSDUG00000022255	-	52	82.381	ENSANAG00000027164	MEX3B	90	50.460	Aotus_nancymaae
ENSSDUG00000022255	-	92	49.905	ENSACLG00000025776	mex3b	91	50.192	Astatotilapia_calliptera
ENSSDUG00000022255	-	100	82.107	ENSACLG00000017634	-	100	81.241	Astatotilapia_calliptera
ENSSDUG00000022255	-	94	52.713	ENSAMXG00000033615	mex3b	92	51.663	Astyanax_mexicanus
ENSSDUG00000022255	-	52	82.381	ENSBTAG00000052904	MEX3B	56	69.366	Bos_taurus
ENSSDUG00000022255	-	52	78.281	ENSCJAG00000008043	MEX3B	90	49.731	Callithrix_jacchus
ENSSDUG00000022255	-	52	82.381	ENSCAFG00000013759	MEX3B	91	50.829	Canis_familiaris
ENSSDUG00000022255	-	52	82.381	ENSCAFG00020015832	MEX3B	89	50.799	Canis_lupus_dingo
ENSSDUG00000022255	-	52	82.381	ENSCHIG00000019863	MEX3B	56	69.366	Capra_hircus
ENSSDUG00000022255	-	52	75.893	ENSCPOG00000008241	MEX3B	64	66.107	Cavia_porcellus
ENSSDUG00000022255	-	52	74.249	ENSCCAG00000001259	MEX3B	90	48.410	Cebus_capucinus
ENSSDUG00000022255	-	52	82.381	ENSCATG00000030784	MEX3B	91	50.460	Cercocebus_atys
ENSSDUG00000022255	-	52	81.905	ENSCLAG00000009451	MEX3B	95	51.095	Chinchilla_lanigera
ENSSDUG00000022255	-	52	82.381	ENSCSAG00000015153	MEX3B	91	50.460	Chlorocebus_sabaeus
ENSSDUG00000022255	-	94	51.992	ENSCPBG00000007809	MEX3B	90	52.510	Chrysemys_picta_bellii
ENSSDUG00000022255	-	67	82.381	ENSCANG00000034524	MEX3B	92	50.832	Colobus_angolensis_palliatus
ENSSDUG00000022255	-	52	82.381	ENSCGRG00001016198	Mex3b	90	50.177	Cricetulus_griseus_chok1gshd
ENSSDUG00000022255	-	81	64.236	ENSCSEG00000005852	mex3b	95	46.112	Cynoglossus_semilaevis
ENSSDUG00000022255	-	100	69.757	ENSCSEG00000011533	-	99	68.817	Cynoglossus_semilaevis
ENSSDUG00000022255	-	87	80.952	ENSCSEG00000006809	-	90	79.967	Cynoglossus_semilaevis
ENSSDUG00000022255	-	100	80.608	ENSCVAG00000006043	-	99	80.029	Cyprinodon_variegatus
ENSSDUG00000022255	-	94	52.703	ENSDARG00000058369	mex3b	91	51.796	Danio_rerio
ENSSDUG00000022255	-	65	65.993	ENSDNOG00000043628	MEX3B	91	50.547	Dasypus_novemcinctus
ENSSDUG00000022255	-	92	52.697	ENSEBUG00000007080	mex3b	88	50.920	Eptatretus_burgeri
ENSSDUG00000022255	-	54	68.990	ENSEASG00005007105	MEX3B	90	50.547	Equus_asinus_asinus
ENSSDUG00000022255	-	80	64.706	ENSECAG00000013497	MEX3B	90	48.768	Equus_caballus
ENSSDUG00000022255	-	53	69.149	ENSELUG00000002503	mex3b	92	49.908	Esox_lucius
ENSSDUG00000022255	-	67	82.381	ENSFCAG00000037513	MEX3B	89	50.738	Felis_catus
ENSSDUG00000022255	-	65	65.878	ENSFDAG00000018452	MEX3B	82	69.014	Fukomys_damarensis
ENSSDUG00000022255	-	100	81.727	ENSFHEG00000022740	-	100	81.727	Fundulus_heteroclitus
ENSSDUG00000022255	-	92	70.707	ENSGMOG00000005826	-	100	71.063	Gadus_morhua
ENSSDUG00000022255	-	78	72.659	ENSGALG00000032984	MEX3B	95	51.769	Gallus_gallus
ENSSDUG00000022255	-	94	81.498	ENSGAFG00000013694	-	98	79.817	Gambusia_affinis
ENSSDUG00000022255	-	92	78.077	ENSGACG00000007490	-	100	78.839	Gasterosteus_aculeatus
ENSSDUG00000022255	-	94	54.059	ENSGAGG00000022839	MEX3B	90	54.365	Gopherus_agassizii
ENSSDUG00000022255	-	52	82.381	ENSGGOG00000000597	MEX3B	91	50.526	Gorilla_gorilla
ENSSDUG00000022255	-	92	50.095	ENSHBUG00000022683	mex3b	91	50.296	Haplochromis_burtoni
ENSSDUG00000022255	-	100	82.540	ENSHBUG00000010552	-	100	81.674	Haplochromis_burtoni
ENSSDUG00000022255	-	52	81.905	ENSHGLG00000012504	MEX3B	90	51.215	Heterocephalus_glaber_female
ENSSDUG00000022255	-	52	81.905	ENSHGLG00100008208	MEX3B	75	69.014	Heterocephalus_glaber_male
ENSSDUG00000022255	-	100	67.283	ENSHCOG00000010812	-	100	67.141	Hippocampus_comes
ENSSDUG00000022255	-	92	51.653	ENSHCOG00000007290	mex3b	90	51.860	Hippocampus_comes
ENSSDUG00000022255	-	92	51.697	ENSIPUG00000023356	mex3b	90	51.210	Ictalurus_punctatus
ENSSDUG00000022255	-	52	82.381	ENSSTOG00000006738	MEX3B	85	50.645	Ictidomys_tridecemlineatus
ENSSDUG00000022255	-	100	79.395	ENSKMAG00000021181	MEX3B	99	80.802	Kryptolebias_marmoratus
ENSSDUG00000022255	-	82	81.911	ENSLBEG00000007607	-	88	80.887	Labrus_bergylta
ENSSDUG00000022255	-	97	50.760	ENSLBEG00000015131	mex3b	94	52.588	Labrus_bergylta
ENSSDUG00000022255	-	94	50.097	ENSLACG00000015887	MEX3B	91	51.292	Latimeria_chalumnae
ENSSDUG00000022255	-	94	51.887	ENSLOCG00000012858	mex3b	91	51.533	Lepisosteus_oculatus
ENSSDUG00000022255	-	80	61.783	ENSLAFG00000006027	MEX3B	95	84.848	Loxodonta_africana
ENSSDUG00000022255	-	52	82.381	ENSMFAG00000037608	MEX3B	91	50.460	Macaca_fascicularis
ENSSDUG00000022255	-	52	78.281	ENSMMUG00000018639	MEX3B	91	49.458	Macaca_mulatta
ENSSDUG00000022255	-	52	82.381	ENSMNEG00000043420	MEX3B	90	50.460	Macaca_nemestrina
ENSSDUG00000022255	-	52	82.381	ENSMLEG00000037832	MEX3B	94	50.460	Mandrillus_leucophaeus
ENSSDUG00000022255	-	92	52.031	ENSMAMG00000011325	mex3b	71	72.285	Mastacembelus_armatus
ENSSDUG00000022255	-	100	83.871	ENSMAMG00000001370	-	100	83.590	Mastacembelus_armatus
ENSSDUG00000022255	-	100	82.107	ENSMZEG00005004908	-	100	81.241	Maylandia_zebra
ENSSDUG00000022255	-	92	50.095	ENSMZEG00005003082	mex3b	91	50.296	Maylandia_zebra
ENSSDUG00000022255	-	52	82.381	ENSMAUG00000001211	Mex3b	57	69.366	Mesocricetus_auratus
ENSSDUG00000022255	-	52	81.905	ENSMICG00000043733	MEX3B	57	69.014	Microcebus_murinus
ENSSDUG00000022255	-	52	82.381	ENSMOCG00000019726	Mex3b	90	50.177	Microtus_ochrogaster
ENSSDUG00000022255	-	89	50.722	ENSMMOG00000015373	mex3b	88	50.103	Mola_mola
ENSSDUG00000022255	-	98	81.673	ENSMMOG00000000120	-	100	77.362	Mola_mola
ENSSDUG00000022255	-	51	83.173	ENSMODG00000019387	MEX3B	87	51.685	Monodelphis_domestica
ENSSDUG00000022255	-	86	85.880	ENSMALG00000009589	-	92	85.430	Monopterus_albus
ENSSDUG00000022255	-	92	49.423	ENSMALG00000010929	mex3b	54	70.301	Monopterus_albus
ENSSDUG00000022255	-	52	82.381	MGP_CAROLIEiJ_G0029937	Mex3b	90	50.178	Mus_caroli
ENSSDUG00000022255	-	52	82.381	ENSMUSG00000057706	Mex3b	90	50.178	Mus_musculus
ENSSDUG00000022255	-	52	82.381	MGP_PahariEiJ_G0013158	Mex3b	90	50.178	Mus_pahari
ENSSDUG00000022255	-	52	82.381	MGP_SPRETEiJ_G0031039	Mex3b	90	49.815	Mus_spretus
ENSSDUG00000022255	-	66	82.381	ENSMPUG00000015493	MEX3B	91	50.829	Mustela_putorius_furo
ENSSDUG00000022255	-	52	82.381	ENSNGAG00000010102	Mex3b	89	50.185	Nannospalax_galili
ENSSDUG00000022255	-	98	80.716	ENSNBRG00000012485	-	97	76.122	Neolamprologus_brichardi
ENSSDUG00000022255	-	92	50.095	ENSNBRG00000000526	mex3b	89	50.296	Neolamprologus_brichardi
ENSSDUG00000022255	-	52	75.829	ENSNLEG00000036285	MEX3B	91	47.794	Nomascus_leucogenys
ENSSDUG00000022255	-	50	82.381	ENSOPRG00000009604	MEX3B	61	68.750	Ochotona_princeps
ENSSDUG00000022255	-	52	81.905	ENSODEG00000015600	MEX3B	57	69.366	Octodon_degus
ENSSDUG00000022255	-	98	80.814	ENSONIG00000015037	-	99	81.769	Oreochromis_niloticus
ENSSDUG00000022255	-	92	50.095	ENSONIG00000003391	mex3b	91	50.296	Oreochromis_niloticus
ENSSDUG00000022255	-	51	72.766	ENSOCUG00000011603	MEX3B	92	51.311	Oryctolagus_cuniculus
ENSSDUG00000022255	-	100	82.395	ENSORLG00000004985	-	100	80.231	Oryzias_latipes
ENSSDUG00000022255	-	100	82.514	ENSORLG00020020174	-	100	81.503	Oryzias_latipes_hni
ENSSDUG00000022255	-	100	82.659	ENSORLG00015008649	-	100	81.503	Oryzias_latipes_hsok
ENSSDUG00000022255	-	100	83.502	ENSOMEG00000023339	-	100	82.634	Oryzias_melastigma
ENSSDUG00000022255	-	52	82.381	ENSOGAG00000029664	MEX3B	89	50.738	Otolemur_garnettii
ENSSDUG00000022255	-	56	71.130	ENSOARG00000014515	MEX3B	60	77.670	Ovis_aries
ENSSDUG00000022255	-	52	82.381	ENSPPAG00000020407	MEX3B	92	50.551	Pan_paniscus
ENSSDUG00000022255	-	52	82.381	ENSPTRG00000007373	MEX3B	90	50.551	Pan_troglodytes
ENSSDUG00000022255	-	52	82.381	ENSPANG00000015634	MEX3B	91	50.460	Papio_anubis
ENSSDUG00000022255	-	92	53.911	ENSPKIG00000019969	-	95	54.661	Paramormyrops_kingsleyae
ENSSDUG00000022255	-	77	69.784	ENSPKIG00000018385	mex3b	91	49.077	Paramormyrops_kingsleyae
ENSSDUG00000022255	-	94	52.883	ENSPSIG00000007979	MEX3B	90	50.800	Pelodiscus_sinensis
ENSSDUG00000022255	-	97	71.514	ENSPMGG00000017559	-	97	68.027	Periophthalmus_magnuspinnatus
ENSSDUG00000022255	-	92	51.992	ENSPMGG00000015808	mex3b	91	50.282	Periophthalmus_magnuspinnatus
ENSSDUG00000022255	-	92	43.555	ENSPMAG00000000125	mex3b	99	41.782	Petromyzon_marinus
ENSSDUG00000022255	-	100	83.165	ENSPFOG00000018999	-	99	81.727	Poecilia_formosa
ENSSDUG00000022255	-	100	83.165	ENSPLAG00000002303	-	99	81.727	Poecilia_latipinna
ENSSDUG00000022255	-	100	82.878	ENSPMEG00000006448	-	99	81.439	Poecilia_mexicana
ENSSDUG00000022255	-	100	83.333	ENSPREG00000018559	-	99	81.466	Poecilia_reticulata
ENSSDUG00000022255	-	52	82.381	ENSPCOG00000019807	MEX3B	57	69.366	Propithecus_coquereli
ENSSDUG00000022255	-	52	82.381	ENSPVAG00000000093	MEX3B	58	69.718	Pteropus_vampyrus
ENSSDUG00000022255	-	100	82.395	ENSPNYG00000010418	-	100	81.530	Pundamilia_nyererei
ENSSDUG00000022255	-	92	50.095	ENSPNYG00000019384	mex3b	88	50.296	Pundamilia_nyererei
ENSSDUG00000022255	-	77	71.004	ENSPNAG00000002109	mex3b	86	66.667	Pygocentrus_nattereri
ENSSDUG00000022255	-	52	82.381	ENSRNOG00000025142	Mex3b	90	50.178	Rattus_norvegicus
ENSSDUG00000022255	-	67	82.381	ENSRBIG00000033099	MEX3B	91	50.832	Rhinopithecus_bieti
ENSSDUG00000022255	-	67	82.381	ENSRROG00000041868	MEX3B	91	50.832	Rhinopithecus_roxellana
ENSSDUG00000022255	-	66	69.014	ENSSFOG00015016308	mex3b	72	67.958	Scleropages_formosus
ENSSDUG00000022255	-	92	51.052	ENSSMAG00000017078	mex3b	91	50.095	Scophthalmus_maximus
ENSSDUG00000022255	-	91	81.838	ENSSMAG00000001075	-	100	88.000	Scophthalmus_maximus
ENSSDUG00000022255	-	100	98.705	ENSSLDG00000024917	-	100	98.705	Seriola_lalandi_dorsalis
ENSSDUG00000022255	-	77	72.388	ENSSLDG00000014620	mex3b	91	51.362	Seriola_lalandi_dorsalis
ENSSDUG00000022255	-	59	84.242	ENSSARG00000006007	MEX3B	60	84.242	Sorex_araneus
ENSSDUG00000022255	-	93	88.253	ENSSPAG00000002581	-	96	87.500	Stegastes_partitus
ENSSDUG00000022255	-	92	54.622	ENSSPAG00000011854	mex3b	90	53.430	Stegastes_partitus
ENSSDUG00000022255	-	52	82.381	ENSSSCG00000038491	MEX3B	89	50.554	Sus_scrofa
ENSSDUG00000022255	-	100	80.318	ENSTRUG00000011888	-	100	79.740	Takifugu_rubripes
ENSSDUG00000022255	-	92	52.546	ENSTRUG00000000367	mex3b	92	52.049	Takifugu_rubripes
ENSSDUG00000022255	-	92	54.397	ENSTNIG00000003398	mex3b	90	54.470	Tetraodon_nigroviridis
ENSSDUG00000022255	-	52	74.569	ENSUAMG00000019302	MEX3B	90	48.582	Ursus_americanus
ENSSDUG00000022255	-	94	53.815	ENSXETG00000027601	mex3b	90	52.419	Xenopus_tropicalis
ENSSDUG00000022255	-	82	74.390	ENSXCOG00000005190	-	94	79.845	Xiphophorus_couchianus
ENSSDUG00000022255	-	100	83.022	ENSXMAG00000015283	-	99	81.583	Xiphophorus_maculatus