EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000022258 (Gene tree)
Gene ID
111232062
Gene Symbol
hdlbpa
Alias
HBP|cb591|cb811|hdlbp|wu:fb36d01|wu:fb94h08|wu:fc23d06|wu:fc75h07
Full Name
high density lipoprotein binding protein
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Plus strand
Length
15222 bases
Position
chrBDQW01000321.1:698205-713426
Accession
111232062
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000030925KH_1PF00013.293.6e-180114
ENSSDUP00000030925KH_1PF00013.293.6e-180214
ENSSDUP00000030925KH_1PF00013.293.6e-180314
ENSSDUP00000030925KH_1PF00013.293.6e-180414
ENSSDUP00000030925KH_1PF00013.293.6e-180514
ENSSDUP00000030925KH_1PF00013.293.6e-180614
ENSSDUP00000030925KH_1PF00013.293.6e-180714
ENSSDUP00000030925KH_1PF00013.293.6e-180814
ENSSDUP00000030925KH_1PF00013.293.6e-180914
ENSSDUP00000030925KH_1PF00013.293.6e-1801014
ENSSDUP00000030925KH_1PF00013.293.6e-1801114
ENSSDUP00000030925KH_1PF00013.293.6e-1801214
ENSSDUP00000030925KH_1PF00013.293.6e-1801314
ENSSDUP00000030925KH_1PF00013.293.6e-1801414
ENSSDUP00000030939KH_1PF00013.295.1e-162112
ENSSDUP00000030939KH_1PF00013.295.1e-162212
ENSSDUP00000030939KH_1PF00013.295.1e-162312
ENSSDUP00000030939KH_1PF00013.295.1e-162412
ENSSDUP00000030939KH_1PF00013.295.1e-162512
ENSSDUP00000030939KH_1PF00013.295.1e-162612
ENSSDUP00000030939KH_1PF00013.295.1e-162712
ENSSDUP00000030939KH_1PF00013.295.1e-162812
ENSSDUP00000030939KH_1PF00013.295.1e-162912
ENSSDUP00000030939KH_1PF00013.295.1e-1621012
ENSSDUP00000030939KH_1PF00013.295.1e-1621112
ENSSDUP00000030939KH_1PF00013.295.1e-1621212
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000031475-3693-ENSSDUP000000309391230 (aa)--
ENSSDUT00000031461-5589XM_022759412ENSSDUP000000309251275 (aa)XP_022615133UPI000BBE12E9
Gene Model
Click here to download ENSSDUG00000022258's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022258's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000022258hdlbpa10071.061ENSSDUG00000020694hdlbpb10071.217
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000022258hdlbpa9979.124ENSG00000115677HDLBP10082.222Homo_sapiens
ENSSDUG00000022258hdlbpa10097.020ENSAPOG00000012609hdlbpa10097.020Acanthochromis_polyacanthus
ENSSDUG00000022258hdlbpa9979.203ENSAMEG00000016552HDLBP10079.203Ailuropoda_melanoleuca
ENSSDUG00000022258hdlbpa10092.384ENSACIG00000006015hdlbpa10092.384Amphilophus_citrinellus
ENSSDUG00000022258hdlbpa10097.255ENSAOCG00000000300hdlbpa10097.255Amphiprion_ocellaris
ENSSDUG00000022258hdlbpa10097.176ENSAPEG00000000522hdlbpa10097.176Amphiprion_percula
ENSSDUG00000022258hdlbpa10096.157ENSATEG00000009748hdlbpa10096.157Anabas_testudineus
ENSSDUG00000022258hdlbpa9980.453ENSACAG00000001556HDLBP10080.453Anolis_carolinensis
ENSSDUG00000022258hdlbpa9978.968ENSANAG00000020545HDLBP10078.968Aotus_nancymaae
ENSSDUG00000022258hdlbpa10094.510ENSACLG00000025965hdlbpa10094.824Astatotilapia_calliptera
ENSSDUG00000022258hdlbpa9392.899ENSAMXG00000004221hdlbpa10092.899Astyanax_mexicanus
ENSSDUG00000022258hdlbpa9978.421ENSBTAG00000004315HDLBP10078.421Bos_taurus
ENSSDUG00000022258hdlbpa9978.767ENSCJAG00000006152HDLBP10078.767Callithrix_jacchus
ENSSDUG00000022258hdlbpa9979.124ENSCAFG00000012913HDLBP10080.000Canis_familiaris
ENSSDUG00000022258hdlbpa9979.124ENSCAFG00020025089HDLBP10079.124Canis_lupus_dingo
ENSSDUG00000022258hdlbpa9978.264ENSCHIG00000022364HDLBP10078.264Capra_hircus
ENSSDUG00000022258hdlbpa9978.421ENSTSYG00000002379HDLBP10078.421Carlito_syrichta
ENSSDUG00000022258hdlbpa9976.176ENSCAPG00000008584HDLBP10076.176Cavia_aperea
ENSSDUG00000022258hdlbpa9979.075ENSCPOG00000006297HDLBP10079.075Cavia_porcellus
ENSSDUG00000022258hdlbpa9156.287ENSCCAG00000037920-10056.287Cebus_capucinus
ENSSDUG00000022258hdlbpa9978.968ENSCCAG00000023361-10078.968Cebus_capucinus
ENSSDUG00000022258hdlbpa9979.046ENSCATG00000039363HDLBP9980.769Cercocebus_atys
ENSSDUG00000022258hdlbpa9979.154ENSCLAG00000002365HDLBP10079.154Chinchilla_lanigera
ENSSDUG00000022258hdlbpa9978.224ENSCSAG00000005781HDLBP10078.224Chlorocebus_sabaeus
ENSSDUG00000022258hdlbpa8960.087ENSCHOG00000003882-9960.087Choloepus_hoffmanni
ENSSDUG00000022258hdlbpa9979.276ENSCPBG00000002442HDLBP10079.276Chrysemys_picta_bellii
ENSSDUG00000022258hdlbpa9979.124ENSCANG00000033571HDLBP9980.769Colobus_angolensis_palliatus
ENSSDUG00000022258hdlbpa9044.351ENSCGRG000010105704921511C20Rik10044.351Cricetulus_griseus_chok1gshd
ENSSDUG00000022258hdlbpa9979.124ENSCGRG00001006086Hdlbp10079.124Cricetulus_griseus_chok1gshd
ENSSDUG00000022258hdlbpa9345.607ENSCGRG00000015720Gm3829445.607Cricetulus_griseus_crigri
ENSSDUG00000022258hdlbpa9979.124ENSCGRG00000014444Hdlbp10079.124Cricetulus_griseus_crigri
ENSSDUG00000022258hdlbpa10093.882ENSCSEG00000008853hdlbpa10093.882Cynoglossus_semilaevis
ENSSDUG00000022258hdlbpa10092.706ENSCVAG00000017892hdlbpa10092.706Cyprinodon_variegatus
ENSSDUG00000022258hdlbpa10090.141ENSDARG00000009830hdlbpa10090.553Danio_rerio
ENSSDUG00000022258hdlbpa9977.121ENSDNOG00000006753HDLBP10077.121Dasypus_novemcinctus
ENSSDUG00000022258hdlbpa9775.099ENSETEG00000005416-7975.099Echinops_telfairi
ENSSDUG00000022258hdlbpa9979.203ENSEASG00005008249HDLBP10079.203Equus_asinus_asinus
ENSSDUG00000022258hdlbpa9979.203ENSECAG00000012829HDLBP10079.203Equus_caballus
ENSSDUG00000022258hdlbpa9948.444ENSECAG00000028723-9948.444Equus_caballus
ENSSDUG00000022258hdlbpa9952.763ENSECAG00000030885-9953.153Equus_caballus
ENSSDUG00000022258hdlbpa9476.645ENSEEUG00000014648HDLBP9577.273Erinaceus_europaeus
ENSSDUG00000022258hdlbpa10088.649ENSELUG00000010700hdlbpa10088.649Esox_lucius
ENSSDUG00000022258hdlbpa9979.124ENSFCAG00000010455HDLBP10079.124Felis_catus
ENSSDUG00000022258hdlbpa9981.626ENSFALG00000003437HDLBP10081.626Ficedula_albicollis
ENSSDUG00000022258hdlbpa9979.405ENSFDAG00000000456HDLBP10079.405Fukomys_damarensis
ENSSDUG00000022258hdlbpa10092.314ENSFHEG00000004848hdlbpa10092.784Fundulus_heteroclitus
ENSSDUG00000022258hdlbpa10088.993ENSGMOG00000009932hdlbpa10089.071Gadus_morhua
ENSSDUG00000022258hdlbpa9981.157ENSGALG00000005823HDLBP10081.470Gallus_gallus
ENSSDUG00000022258hdlbpa10061.166ENSGAFG00000016766hdlbpa10061.166Gambusia_affinis
ENSSDUG00000022258hdlbpa10092.091ENSGACG00000004648hdlbpa10092.091Gasterosteus_aculeatus
ENSSDUG00000022258hdlbpa9981.157ENSGAGG00000004256HDLBP10081.157Gopherus_agassizii
ENSSDUG00000022258hdlbpa9979.124ENSGGOG00000004392HDLBP10080.769Gorilla_gorilla
ENSSDUG00000022258hdlbpa10094.667ENSHBUG00000001136hdlbpa10094.980Haplochromis_burtoni
ENSSDUG00000022258hdlbpa9978.700ENSHGLG00000004910HDLBP10078.700Heterocephalus_glaber_female
ENSSDUG00000022258hdlbpa9978.700ENSHGLG00100013326HDLBP10079.330Heterocephalus_glaber_male
ENSSDUG00000022258hdlbpa10092.584ENSHCOG00000014837hdlbpa10092.662Hippocampus_comes
ENSSDUG00000022258hdlbpa8483.835ENSIPUG00000013177-9383.835Ictalurus_punctatus
ENSSDUG00000022258hdlbpa10090.513ENSIPUG00000013088hdlbp10090.513Ictalurus_punctatus
ENSSDUG00000022258hdlbpa9978.543ENSSTOG00000013331HDLBP10079.170Ictidomys_tridecemlineatus
ENSSDUG00000022258hdlbpa9979.593ENSJJAG00000003596Hdlbp10079.593Jaculus_jaculus
ENSSDUG00000022258hdlbpa9041.095ENSJJAG00000013712-9341.095Jaculus_jaculus
ENSSDUG00000022258hdlbpa10091.922ENSKMAG00000007571hdlbpa10092.235Kryptolebias_marmoratus
ENSSDUG00000022258hdlbpa10094.141ENSLBEG00000027461hdlbpa10094.223Labrus_bergylta
ENSSDUG00000022258hdlbpa10083.581ENSLACG00000003592HDLBP10083.581Latimeria_chalumnae
ENSSDUG00000022258hdlbpa10088.410ENSLOCG00000006278hdlbpa10088.410Lepisosteus_oculatus
ENSSDUG00000022258hdlbpa9978.968ENSLAFG00000014826HDLBP10078.968Loxodonta_africana
ENSSDUG00000022258hdlbpa9979.046ENSMFAG00000033641HDLBP9980.769Macaca_fascicularis
ENSSDUG00000022258hdlbpa9978.984ENSMMUG00000004730HDLBP10078.984Macaca_mulatta
ENSSDUG00000022258hdlbpa9979.046ENSMNEG00000024260HDLBP9980.769Macaca_nemestrina
ENSSDUG00000022258hdlbpa9979.046ENSMLEG00000042734HDLBP9980.769Mandrillus_leucophaeus
ENSSDUG00000022258hdlbpa10095.765ENSMAMG00000008611hdlbpa10096.078Mastacembelus_armatus
ENSSDUG00000022258hdlbpa10094.510ENSMZEG00005009513hdlbpa10094.824Maylandia_zebra
ENSSDUG00000022258hdlbpa9978.890ENSMGAG00000003686HDLBP10082.544Meleagris_gallopavo
ENSSDUG00000022258hdlbpa9979.281ENSMAUG00000017743Hdlbp10079.281Mesocricetus_auratus
ENSSDUG00000022258hdlbpa9979.359ENSMICG00000004569HDLBP10079.359Microcebus_murinus
ENSSDUG00000022258hdlbpa9979.359ENSMOCG00000006679Hdlbp10079.359Microtus_ochrogaster
ENSSDUG00000022258hdlbpa9888.996ENSMMOG00000006880hdlbpa9988.996Mola_mola
ENSSDUG00000022258hdlbpa9979.286ENSMODG00000016033HDLBP10079.286Monodelphis_domestica
ENSSDUG00000022258hdlbpa10094.592ENSMALG00000015095hdlbpa10094.749Monopterus_albus
ENSSDUG00000022258hdlbpa9979.281MGP_CAROLIEiJ_G0014456Hdlbp10079.330Mus_caroli
ENSSDUG00000022258hdlbpa9444.463MGP_CAROLIEiJ_G0033373Gm3829544.463Mus_caroli
ENSSDUG00000022258hdlbpa9043.215MGP_CAROLIEiJ_G00333744921511C20Rik10043.215Mus_caroli
ENSSDUG00000022258hdlbpa9979.281ENSMUSG00000034088Hdlbp10079.330Mus_musculus
ENSSDUG00000022258hdlbpa9043.096ENSMUSG000000498154921511C20Rik10043.096Mus_musculus
ENSSDUG00000022258hdlbpa9543.607ENSMUSG00000062791Gm3829643.607Mus_musculus
ENSSDUG00000022258hdlbpa9979.203MGP_PahariEiJ_G0027692Hdlbp10079.330Mus_pahari
ENSSDUG00000022258hdlbpa8841.929MGP_PahariEiJ_G00319144921511C20Rik10041.929Mus_pahari
ENSSDUG00000022258hdlbpa9543.934MGP_PahariEiJ_G0031913Gm3829643.934Mus_pahari
ENSSDUG00000022258hdlbpa9979.281MGP_SPRETEiJ_G0015260Hdlbp10079.330Mus_spretus
ENSSDUG00000022258hdlbpa9042.469MGP_SPRETEiJ_G00345394921511C20Rik10042.469Mus_spretus
ENSSDUG00000022258hdlbpa9543.525MGP_SPRETEiJ_G0034538Gm3829643.525Mus_spretus
ENSSDUG00000022258hdlbpa9979.219ENSMPUG00000000163HDLBP10079.219Mustela_putorius_furo
ENSSDUG00000022258hdlbpa9979.327ENSMLUG00000005628HDLBP10079.327Myotis_lucifugus
ENSSDUG00000022258hdlbpa9979.672ENSNGAG00000014873Hdlbp10079.672Nannospalax_galili
ENSSDUG00000022258hdlbpa9894.880ENSNBRG00000000051hdlbpa9995.200Neolamprologus_brichardi
ENSSDUG00000022258hdlbpa9978.890ENSNLEG00000013818HDLBP9980.988Nomascus_leucogenys
ENSSDUG00000022258hdlbpa9572.086ENSNLEG00000031018-9975.704Nomascus_leucogenys
ENSSDUG00000022258hdlbpa9985.324ENSMEUG00000008427HDLBP8885.324Notamacropus_eugenii
ENSSDUG00000022258hdlbpa9479.800ENSOPRG00000011965-9479.800Ochotona_princeps
ENSSDUG00000022258hdlbpa9978.605ENSODEG00000012313-10078.605Octodon_degus
ENSSDUG00000022258hdlbpa9974.451ENSODEG00000017391-10074.451Octodon_degus
ENSSDUG00000022258hdlbpa10094.275ENSONIG00000019272hdlbpa10094.588Oreochromis_niloticus
ENSSDUG00000022258hdlbpa9980.110ENSOANG00000011759-10080.110Ornithorhynchus_anatinus
ENSSDUG00000022258hdlbpa5986.620ENSOANG00000021864-9989.623Ornithorhynchus_anatinus
ENSSDUG00000022258hdlbpa9979.046ENSOCUG00000012667HDLBP10079.046Oryctolagus_cuniculus
ENSSDUG00000022258hdlbpa10092.835ENSORLG00000002226hdlbpa10093.069Oryzias_latipes
ENSSDUG00000022258hdlbpa10092.679ENSORLG00020007905hdlbpa10092.913Oryzias_latipes_hni
ENSSDUG00000022258hdlbpa10092.835ENSORLG00015004126hdlbpa10093.069Oryzias_latipes_hsok
ENSSDUG00000022258hdlbpa10090.469ENSOMEG00000000247hdlbpa9993.333Oryzias_melastigma
ENSSDUG00000022258hdlbpa9978.342ENSOGAG00000000738HDLBP10078.342Otolemur_garnettii
ENSSDUG00000022258hdlbpa9976.576ENSOARG00000017870HDLBP10076.576Ovis_aries
ENSSDUG00000022258hdlbpa9978.968ENSPPAG00000023318HDLBP10080.769Pan_paniscus
ENSSDUG00000022258hdlbpa9979.203ENSPPRG00000010215HDLBP10079.203Panthera_pardus
ENSSDUG00000022258hdlbpa9381.250ENSPTIG00000009328HDLBP9781.250Panthera_tigris_altaica
ENSSDUG00000022258hdlbpa9979.046ENSPTRG00000013121HDLBP10080.769Pan_troglodytes
ENSSDUG00000022258hdlbpa9978.968ENSPANG00000011832HDLBP9980.769Papio_anubis
ENSSDUG00000022258hdlbpa10088.489ENSPKIG00000002392hdlbpa10088.489Paramormyrops_kingsleyae
ENSSDUG00000022258hdlbpa9481.046ENSPSIG00000010068HDLBP10081.046Pelodiscus_sinensis
ENSSDUG00000022258hdlbpa10081.216ENSPMGG00000002102hdlbpa10081.216Periophthalmus_magnuspinnatus
ENSSDUG00000022258hdlbpa9979.437ENSPEMG00000017704Hdlbp10079.437Peromyscus_maniculatus_bairdii
ENSSDUG00000022258hdlbpa9979.921ENSPCIG00000015375HDLBP9479.921Phascolarctos_cinereus
ENSSDUG00000022258hdlbpa10093.025ENSPFOG00000000236hdlbpa10093.025Poecilia_formosa
ENSSDUG00000022258hdlbpa9593.367ENSPLAG00000006033hdlbpa10093.698Poecilia_latipinna
ENSSDUG00000022258hdlbpa10092.706ENSPMEG00000006627hdlbpa10093.020Poecilia_mexicana
ENSSDUG00000022258hdlbpa10067.732ENSPREG00000014450hdlbpa10068.511Poecilia_reticulata
ENSSDUG00000022258hdlbpa9978.733ENSPPYG00000013351HDLBP10078.733Pongo_abelii
ENSSDUG00000022258hdlbpa9974.105ENSPCAG00000011136HDLBP7974.105Procavia_capensis
ENSSDUG00000022258hdlbpa9374.750ENSPCOG00000021622HDLBP10068.449Propithecus_coquereli
ENSSDUG00000022258hdlbpa9978.543ENSPVAG00000000555HDLBP10078.543Pteropus_vampyrus
ENSSDUG00000022258hdlbpa10094.588ENSPNYG00000020753hdlbpa10094.902Pundamilia_nyererei
ENSSDUG00000022258hdlbpa10087.392ENSPNAG00000029610hdlbpa10087.392Pygocentrus_nattereri
ENSSDUG00000022258hdlbpa9979.281ENSRNOG00000031479Hdlbp10079.281Rattus_norvegicus
ENSSDUG00000022258hdlbpa9644.669ENSRNOG00000031294RGD15631049744.669Rattus_norvegicus
ENSSDUG00000022258hdlbpa8943.146ENSRNOG00000028847AABR07040251.110043.146Rattus_norvegicus
ENSSDUG00000022258hdlbpa9342.610ENSRNOG00000042823RGD15612309342.610Rattus_norvegicus
ENSSDUG00000022258hdlbpa9979.046ENSRBIG00000041381HDLBP10079.046Rhinopithecus_bieti
ENSSDUG00000022258hdlbpa9979.046ENSRROG00000034263HDLBP10079.046Rhinopithecus_roxellana
ENSSDUG00000022258hdlbpa9978.717ENSSBOG00000029714-9980.328Saimiri_boliviensis_boliviensis
ENSSDUG00000022258hdlbpa9170.112ENSSBOG00000033067-9670.112Saimiri_boliviensis_boliviensis
ENSSDUG00000022258hdlbpa9979.906ENSSHAG00000012422HDLBP10079.906Sarcophilus_harrisii
ENSSDUG00000022258hdlbpa10089.898ENSSFOG00015018627hdlbp10089.898Scleropages_formosus
ENSSDUG00000022258hdlbpa10094.938ENSSMAG00000002382hdlbpa10095.249Scophthalmus_maximus
ENSSDUG00000022258hdlbpa10099.922ENSSLDG00000004437hdlbpa10099.922Seriola_lalandi_dorsalis
ENSSDUG00000022258hdlbpa9468.619ENSSARG00000012639HDLBP9468.619Sorex_araneus
ENSSDUG00000022258hdlbpa9979.672ENSSPUG00000009182HDLBP10079.672Sphenodon_punctatus
ENSSDUG00000022258hdlbpa10097.100ENSSPAG00000009145hdlbpa10097.100Stegastes_partitus
ENSSDUG00000022258hdlbpa9978.264ENSSSCG00000016379HDLBP10078.987Sus_scrofa
ENSSDUG00000022258hdlbpa9482.512ENSTGUG00000006189HDLBP10082.512Taeniopygia_guttata
ENSSDUG00000022258hdlbpa10092.000ENSTRUG00000012148hdlbpa10092.000Takifugu_rubripes
ENSSDUG00000022258hdlbpa9991.911ENSTNIG00000004185hdlbpa10091.911Tetraodon_nigroviridis
ENSSDUG00000022258hdlbpa8974.214ENSTBEG00000001860HDLBP8874.214Tupaia_belangeri
ENSSDUG00000022258hdlbpa9980.690ENSTTRG00000015251HDLBP7780.690Tursiops_truncatus
ENSSDUG00000022258hdlbpa9979.359ENSUAMG00000018383HDLBP10079.745Ursus_americanus
ENSSDUG00000022258hdlbpa9979.281ENSUMAG00000010539HDLBP10079.281Ursus_maritimus
ENSSDUG00000022258hdlbpa9256.623ENSVPAG00000003112HDLBP9356.623Vicugna_pacos
ENSSDUG00000022258hdlbpa9480.172ENSVVUG00000022797HDLBP9980.172Vulpes_vulpes
ENSSDUG00000022258hdlbpa9979.013ENSXETG00000012164hdlbp9979.013Xenopus_tropicalis
ENSSDUG00000022258hdlbpa10091.216ENSXCOG00000005943hdlbpa10091.451Xiphophorus_couchianus
ENSSDUG00000022258hdlbpa10091.953ENSXMAG00000003787hdlbpa10092.266Xiphophorus_maculatus

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