EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000022273 (Gene tree)
Gene ID
111229895
Gene Symbol
hbp1
Alias
wu:fj62c10|zgc:112297
Full Name
HMG-box transcription factor 1
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Minus strand
Length
8592 bases
Position
chrBDQW01000242.1:1975788-1984379
Accession
111229895
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000030948AXHPF08517.122.9e-3511
ENSSDUP00000030937AXHPF08517.124.7e-3511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000031484-1413-ENSSDUP00000030948470 (aa)--
ENSSDUT00000031473-3075XM_022756417ENSSDUP00000030937452 (aa)XP_022612138UPI000BBEB3A4
Gene Model
Click here to download ENSSDUG00000022273's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022273's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000022273hbp19962.526ENSSDUG00000015387-8961.181
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000022273hbp19962.986ENSG00000105856HBP19671.622Homo_sapiens
ENSSDUG00000022273hbp110096.239ENSAPOG00000015816hbp110096.239Acanthochromis_polyacanthus
ENSSDUG00000022273hbp19963.190ENSAMEG00000013492HBP19860.938Ailuropoda_melanoleuca
ENSSDUG00000022273hbp19895.506ENSACIG00000018873hbp19195.506Amphilophus_citrinellus
ENSSDUG00000022273hbp19961.605ENSACIG00000019093-9359.653Amphilophus_citrinellus
ENSSDUG00000022273hbp110096.903ENSAOCG00000010889hbp110096.903Amphiprion_ocellaris
ENSSDUG00000022273hbp19963.694ENSAOCG00000001429-9262.581Amphiprion_ocellaris
ENSSDUG00000022273hbp19963.113ENSAPEG00000022589-9261.987Amphiprion_percula
ENSSDUG00000022273hbp110096.460ENSAPEG00000002330hbp110096.460Amphiprion_percula
ENSSDUG00000022273hbp19863.034ENSATEG00000003902-9661.555Anabas_testudineus
ENSSDUG00000022273hbp110096.903ENSATEG00000016411hbp110096.903Anabas_testudineus
ENSSDUG00000022273hbp19965.244ENSAPLG00000007110HBP19962.913Anas_platyrhynchos
ENSSDUG00000022273hbp19962.173ENSACAG00000015023HBP19959.345Anolis_carolinensis
ENSSDUG00000022273hbp19963.061ENSANAG00000022302HBP19673.469Aotus_nancymaae
ENSSDUG00000022273hbp110095.575ENSACLG00000004758hbp19595.575Astatotilapia_calliptera
ENSSDUG00000022273hbp19963.578ENSACLG00000003606HBP19262.581Astatotilapia_calliptera
ENSSDUG00000022273hbp19976.017ENSAMXG00000017678hbp19376.874Astyanax_mexicanus
ENSSDUG00000022273hbp19962.602ENSBTAG00000005524HBP19760.665Bos_taurus
ENSSDUG00000022273hbp19962.986ENSCJAG00000016260HBP19773.469Callithrix_jacchus
ENSSDUG00000022273hbp19963.730ENSCAFG00000003939HBP19761.252Canis_familiaris
ENSSDUG00000022273hbp19963.730ENSCAFG00020023119HBP19761.252Canis_lupus_dingo
ENSSDUG00000022273hbp19962.602ENSCHIG00000024405HBP19960.665Capra_hircus
ENSSDUG00000022273hbp19962.348ENSTSYG00000010057HBP19960.311Carlito_syrichta
ENSSDUG00000022273hbp19962.781ENSCAPG00000017460HBP19860.274Cavia_aperea
ENSSDUG00000022273hbp19963.190ENSCPOG00000002375HBP19760.665Cavia_porcellus
ENSSDUG00000022273hbp19962.781ENSCCAG00000026359HBP19673.469Cebus_capucinus
ENSSDUG00000022273hbp19962.857ENSCATG00000021910HBP19961.014Cercocebus_atys
ENSSDUG00000022273hbp19962.372ENSCLAG00000005170HBP19960.742Chinchilla_lanigera
ENSSDUG00000022273hbp19962.857ENSCSAG00000011395HBP19761.014Chlorocebus_sabaeus
ENSSDUG00000022273hbp16894.118ENSCHOG00000006820HBP16994.118Choloepus_hoffmanni
ENSSDUG00000022273hbp19964.837ENSCPBG00000000954HBP19762.500Chrysemys_picta_bellii
ENSSDUG00000022273hbp19962.857ENSCANG00000022804HBP19961.014Colobus_angolensis_palliatus
ENSSDUG00000022273hbp19962.272ENSCGRG00001014437Hbp19760.234Cricetulus_griseus_chok1gshd
ENSSDUG00000022273hbp19962.272ENSCGRG00000013859Hbp19760.234Cricetulus_griseus_crigri
ENSSDUG00000022273hbp110092.699ENSCSEG00000003373hbp110092.699Cynoglossus_semilaevis
ENSSDUG00000022273hbp19962.882ENSCVAG00000008501-9461.304Cyprinodon_variegatus
ENSSDUG00000022273hbp110093.142ENSCVAG00000008930hbp110093.142Cyprinodon_variegatus
ENSSDUG00000022273hbp110077.174ENSDARG00000028517hbp19577.609Danio_rerio
ENSSDUG00000022273hbp19962.933ENSDNOG00000004405HBP19460.624Dasypus_novemcinctus
ENSSDUG00000022273hbp16756.627ENSDORG00000010576Hbp19654.930Dipodomys_ordii
ENSSDUG00000022273hbp19956.823ENSETEG00000018542HBP19954.581Echinops_telfairi
ENSSDUG00000022273hbp19844.864ENSEBUG00000016475hbp18445.625Eptatretus_burgeri
ENSSDUG00000022273hbp19963.265ENSEASG00005017469HBP19060.742Equus_asinus_asinus
ENSSDUG00000022273hbp19963.061ENSECAG00000020969HBP19860.938Equus_caballus
ENSSDUG00000022273hbp19966.022ENSELUG00000017031-8765.011Esox_lucius
ENSSDUG00000022273hbp19982.096ENSELUG00000006967hbp19979.039Esox_lucius
ENSSDUG00000022273hbp19962.577ENSFCAG00000005858HBP19060.742Felis_catus
ENSSDUG00000022273hbp19965.041ENSFALG00000010259HBP19762.718Ficedula_albicollis
ENSSDUG00000022273hbp19961.963ENSFDAG00000007897HBP19760.156Fukomys_damarensis
ENSSDUG00000022273hbp110092.478ENSFHEG00000008222hbp110092.478Fundulus_heteroclitus
ENSSDUG00000022273hbp19962.851ENSFHEG00000014389-9262.554Fundulus_heteroclitus
ENSSDUG00000022273hbp110086.947ENSGMOG00000013782hbp110086.947Gadus_morhua
ENSSDUG00000022273hbp19964.837ENSGALG00000008050HBP19761.942Gallus_gallus
ENSSDUG00000022273hbp19964.396ENSGAFG00000004651-9264.396Gambusia_affinis
ENSSDUG00000022273hbp110093.805ENSGAFG00000021976hbp110093.805Gambusia_affinis
ENSSDUG00000022273hbp110090.351ENSGACG00000010054hbp110090.351Gasterosteus_aculeatus
ENSSDUG00000022273hbp19961.905ENSGACG00000019192-9560.954Gasterosteus_aculeatus
ENSSDUG00000022273hbp19964.562ENSGAGG00000023042HBP19762.622Gopherus_agassizii
ENSSDUG00000022273hbp19962.781ENSGGOG00000007788HBP19574.074Gorilla_gorilla
ENSSDUG00000022273hbp110095.796ENSHBUG00000004967hbp19595.796Haplochromis_burtoni
ENSSDUG00000022273hbp19963.326ENSHBUG00000016198-9262.553Haplochromis_burtoni
ENSSDUG00000022273hbp19961.759ENSHGLG00000019188HBP19760.352Heterocephalus_glaber_female
ENSSDUG00000022273hbp19947.917ENSHGLG00100014672-9946.906Heterocephalus_glaber_male
ENSSDUG00000022273hbp19961.759ENSHGLG00100001912HBP19760.352Heterocephalus_glaber_male
ENSSDUG00000022273hbp110086.947ENSHCOG00000011877hbp110086.726Hippocampus_comes
ENSSDUG00000022273hbp19856.957ENSHCOG00000010740-9155.973Hippocampus_comes
ENSSDUG00000022273hbp19976.923ENSIPUG00000023044hbp19376.282Ictalurus_punctatus
ENSSDUG00000022273hbp19962.933ENSSTOG00000013846HBP19760.819Ictidomys_tridecemlineatus
ENSSDUG00000022273hbp19962.933ENSJJAG00000015341Hbp19760.819Jaculus_jaculus
ENSSDUG00000022273hbp110093.805ENSKMAG00000003132hbp110093.805Kryptolebias_marmoratus
ENSSDUG00000022273hbp19961.572ENSKMAG00000000266-9660.394Kryptolebias_marmoratus
ENSSDUG00000022273hbp110095.133ENSLBEG00000012078hbp110095.133Labrus_bergylta
ENSSDUG00000022273hbp19960.776ENSLBEG00000023959-9360.345Labrus_bergylta
ENSSDUG00000022273hbp110065.377ENSLACG00000009119HBP19264.286Latimeria_chalumnae
ENSSDUG00000022273hbp19974.021ENSLOCG00000015822hbp19273.608Lepisosteus_oculatus
ENSSDUG00000022273hbp19961.100ENSLAFG00000005317HBP19959.259Loxodonta_africana
ENSSDUG00000022273hbp19962.857ENSMFAG00000030375HBP19674.074Macaca_fascicularis
ENSSDUG00000022273hbp19962.551ENSMMUG00000015409HBP19768.750Macaca_mulatta
ENSSDUG00000022273hbp19960.625ENSMNEG00000037516HBP19959.245Macaca_nemestrina
ENSSDUG00000022273hbp19962.857ENSMLEG00000031993HBP19961.014Mandrillus_leucophaeus
ENSSDUG00000022273hbp110096.681ENSMAMG00000023227hbp110096.681Mastacembelus_armatus
ENSSDUG00000022273hbp19962.208ENSMAMG00000023588-9160.934Mastacembelus_armatus
ENSSDUG00000022273hbp19963.578ENSMZEG00005015065HBP19262.581Maylandia_zebra
ENSSDUG00000022273hbp19995.526ENSMZEG00005005999hbp17995.526Maylandia_zebra
ENSSDUG00000022273hbp19964.634ENSMGAG00000006880HBP19762.330Meleagris_gallopavo
ENSSDUG00000022273hbp19962.525ENSMAUG00000011449Hbp19759.844Mesocricetus_auratus
ENSSDUG00000022273hbp19962.781ENSMICG00000012858HBP19774.074Microcebus_murinus
ENSSDUG00000022273hbp19962.525ENSMOCG00000019227Hbp19760.155Microtus_ochrogaster
ENSSDUG00000022273hbp19990.828ENSMMOG00000012207hbp19591.480Mola_mola
ENSSDUG00000022273hbp19962.338ENSMMOG00000010239-9860.606Mola_mola
ENSSDUG00000022273hbp19963.618ENSMODG00000016376HBP18861.014Monodelphis_domestica
ENSSDUG00000022273hbp19958.155ENSMALG00000010834-9557.974Monopterus_albus
ENSSDUG00000022273hbp110096.460ENSMALG00000009884hbp110096.460Monopterus_albus
ENSSDUG00000022273hbp19962.805MGP_CAROLIEiJ_G0017683Hbp17980.303Mus_caroli
ENSSDUG00000022273hbp19962.805ENSMUSG00000002996Hbp17980.303Mus_musculus
ENSSDUG00000022273hbp19962.729MGP_PahariEiJ_G0029441Hbp17980.916Mus_pahari
ENSSDUG00000022273hbp19962.805MGP_SPRETEiJ_G0018525Hbp17980.303Mus_spretus
ENSSDUG00000022273hbp19963.599ENSMPUG00000018249HBP19761.328Mustela_putorius_furo
ENSSDUG00000022273hbp19962.910ENSMLUG00000012425HBP19761.057Myotis_lucifugus
ENSSDUG00000022273hbp19962.729ENSNGAG00000023485Hbp19760.624Nannospalax_galili
ENSSDUG00000022273hbp110095.575ENSNBRG00000001405hbp19595.575Neolamprologus_brichardi
ENSSDUG00000022273hbp19963.830ENSNBRG00000017820-9262.766Neolamprologus_brichardi
ENSSDUG00000022273hbp19962.986ENSNLEG00000008761HBP19574.074Nomascus_leucogenys
ENSSDUG00000022273hbp18858.998ENSMEUG00000011116HBP18956.522Notamacropus_eugenii
ENSSDUG00000022273hbp16894.118ENSOPRG00000005315HBP16994.118Ochotona_princeps
ENSSDUG00000022273hbp19953.448ENSODEG00000000482-9752.452Octodon_degus
ENSSDUG00000022273hbp19945.860ENSODEG00000010517-9944.828Octodon_degus
ENSSDUG00000022273hbp19962.168ENSODEG00000001327-9760.547Octodon_degus
ENSSDUG00000022273hbp110096.239ENSONIG00000008523hbp110096.239Oreochromis_niloticus
ENSSDUG00000022273hbp19961.506ENSONIG00000011868-9661.506Oreochromis_niloticus
ENSSDUG00000022273hbp19963.786ENSOANG00000003174HBP19960.827Ornithorhynchus_anatinus
ENSSDUG00000022273hbp19963.860ENSOCUG00000012758HBP19961.493Oryctolagus_cuniculus
ENSSDUG00000022273hbp19961.588ENSORLG00000009474-9260.300Oryzias_latipes
ENSSDUG00000022273hbp110092.478ENSORLG00000004396hbp19992.683Oryzias_latipes
ENSSDUG00000022273hbp19962.017ENSORLG00020004269-9260.730Oryzias_latipes_hni
ENSSDUG00000022273hbp110092.035ENSORLG00020000370hbp110092.035Oryzias_latipes_hni
ENSSDUG00000022273hbp110091.814ENSORLG00015006557hbp19992.018Oryzias_latipes_hsok
ENSSDUG00000022273hbp110092.920ENSOMEG00000012837hbp110092.920Oryzias_melastigma
ENSSDUG00000022273hbp19962.987ENSOMEG00000013045-9061.874Oryzias_melastigma
ENSSDUG00000022273hbp19962.781ENSOGAG00000013102HBP19960.547Otolemur_garnettii
ENSSDUG00000022273hbp19962.398ENSOARG00000005055HBP19760.470Ovis_aries
ENSSDUG00000022273hbp19962.986ENSPPAG00000042116HBP19574.074Pan_paniscus
ENSSDUG00000022273hbp19962.577ENSPPRG00000007240HBP19960.938Panthera_pardus
ENSSDUG00000022273hbp19960.532ENSPTIG00000002734HBP19958.984Panthera_tigris_altaica
ENSSDUG00000022273hbp19962.986ENSPTRG00000019575HBP19574.074Pan_troglodytes
ENSSDUG00000022273hbp19962.857ENSPANG00000024385HBP19674.074Papio_anubis
ENSSDUG00000022273hbp19975.536ENSPKIG00000016967hbp19476.824Paramormyrops_kingsleyae
ENSSDUG00000022273hbp19866.292ENSPKIG00000016269HBP19167.198Paramormyrops_kingsleyae
ENSSDUG00000022273hbp19964.634ENSPSIG00000012478HBP19162.305Pelodiscus_sinensis
ENSSDUG00000022273hbp19958.206ENSPMGG00000008031-9455.435Periophthalmus_magnuspinnatus
ENSSDUG00000022273hbp110093.435ENSPMGG00000005789hbp19692.560Periophthalmus_magnuspinnatus
ENSSDUG00000022273hbp19962.525ENSPEMG00000014801Hbp19759.961Peromyscus_maniculatus_bairdii
ENSSDUG00000022273hbp19849.893ENSPMAG00000002631hbp19350.104Petromyzon_marinus
ENSSDUG00000022273hbp19963.415ENSPCIG00000004275HBP18861.014Phascolarctos_cinereus
ENSSDUG00000022273hbp19964.333ENSPFOG00000012271-8962.363Poecilia_formosa
ENSSDUG00000022273hbp110094.027ENSPFOG00000003951hbp110094.027Poecilia_formosa
ENSSDUG00000022273hbp110094.027ENSPLAG00000003142hbp110094.027Poecilia_latipinna
ENSSDUG00000022273hbp19964.317ENSPLAG00000012669-9862.335Poecilia_latipinna
ENSSDUG00000022273hbp19964.333ENSPMEG00000015095-9262.363Poecilia_mexicana
ENSSDUG00000022273hbp110094.027ENSPMEG00000003800hbp110094.027Poecilia_mexicana
ENSSDUG00000022273hbp110093.584ENSPREG00000004000hbp110093.584Poecilia_reticulata
ENSSDUG00000022273hbp16468.966ENSPREG00000015242-8468.166Poecilia_reticulata
ENSSDUG00000022273hbp19962.781ENSPPYG00000017898HBP19761.133Pongo_abelii
ENSSDUG00000022273hbp19961.284ENSPCAG00000014060HBP19959.802Procavia_capensis
ENSSDUG00000022273hbp19959.188ENSPCOG00000015370HBP19957.026Propithecus_coquereli
ENSSDUG00000022273hbp19962.705ENSPVAG00000014543HBP19960.980Pteropus_vampyrus
ENSSDUG00000022273hbp19963.753ENSPNYG00000015063HBP19262.766Pundamilia_nyererei
ENSSDUG00000022273hbp110095.575ENSPNYG00000001079hbp19595.575Pundamilia_nyererei
ENSSDUG00000022273hbp19977.516ENSPNAG00000029977hbp19476.483Pygocentrus_nattereri
ENSSDUG00000022273hbp19962.577ENSRNOG00000008927Hbp19760.039Rattus_norvegicus
ENSSDUG00000022273hbp19955.901ENSRBIG00000042410HBP19954.672Rhinopithecus_bieti
ENSSDUG00000022273hbp19962.857ENSRROG00000036622HBP19674.074Rhinopithecus_roxellana
ENSSDUG00000022273hbp19962.781ENSSBOG00000023603HBP19573.469Saimiri_boliviensis_boliviensis
ENSSDUG00000022273hbp19963.821ENSSHAG00000010948HBP19761.404Sarcophilus_harrisii
ENSSDUG00000022273hbp19976.211ENSSFOG00015011155hbp19575.365Scleropages_formosus
ENSSDUG00000022273hbp19961.441ENSSMAG00000012631-8861.474Scophthalmus_maximus
ENSSDUG00000022273hbp110096.239ENSSMAG00000009892hbp110096.239Scophthalmus_maximus
ENSSDUG00000022273hbp110099.779ENSSLDG00000009669hbp110099.779Seriola_lalandi_dorsalis
ENSSDUG00000022273hbp19962.128ENSSLDG00000017324-9960.593Seriola_lalandi_dorsalis
ENSSDUG00000022273hbp18859.268ENSSARG00000007731HBP19956.863Sorex_araneus
ENSSDUG00000022273hbp19964.969ENSSPUG00000019157HBP19463.035Sphenodon_punctatus
ENSSDUG00000022273hbp110097.124ENSSPAG00000004739hbp110097.124Stegastes_partitus
ENSSDUG00000022273hbp19963.169ENSSPAG00000009193-9261.957Stegastes_partitus
ENSSDUG00000022273hbp19963.469ENSSSCG00000035673HBP19961.328Sus_scrofa
ENSSDUG00000022273hbp19964.837ENSTGUG00000003100HBP19962.403Taeniopygia_guttata
ENSSDUG00000022273hbp19954.701ENSTRUG00000011881-7953.132Takifugu_rubripes
ENSSDUG00000022273hbp110093.142ENSTRUG00000016990hbp110093.142Takifugu_rubripes
ENSSDUG00000022273hbp19954.545ENSTNIG00000002023-9750.787Tetraodon_nigroviridis
ENSSDUG00000022273hbp110093.584ENSTNIG00000016027hbp19993.584Tetraodon_nigroviridis
ENSSDUG00000022273hbp19954.545ENSTBEG00000007793HBP19952.569Tupaia_belangeri
ENSSDUG00000022273hbp19963.415ENSTTRG00000006826HBP19960.938Tursiops_truncatus
ENSSDUG00000022273hbp19963.525ENSUAMG00000005951HBP19761.252Ursus_americanus
ENSSDUG00000022273hbp19963.525ENSUMAG00000018257HBP19761.057Ursus_maritimus
ENSSDUG00000022273hbp19953.830ENSVPAG00000008629HBP19952.979Vicugna_pacos
ENSSDUG00000022273hbp19963.730ENSVVUG00000022009HBP19761.252Vulpes_vulpes
ENSSDUG00000022273hbp19962.933ENSXETG00000005922hbp19560.079Xenopus_tropicalis
ENSSDUG00000022273hbp19993.512ENSXCOG00000020795hbp19590.330Xiphophorus_couchianus
ENSSDUG00000022273hbp19964.333ENSXMAG00000007586-9262.363Xiphophorus_maculatus
ENSSDUG00000022273hbp110093.584ENSXMAG00000016455hbp110093.584Xiphophorus_maculatus

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