EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000022279 (Gene tree)
Gene ID: 111231477
Gene Symbol: polr1e
Alias: zgc:112501
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 5468 bases
Position: chrBDQW01000301.1:385564-391031
Accession: 111231477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000030947	RNA_pol_I_A49	PF06870.12	2.6e-113	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000031483	-	3198	XM_022758582	ENSSDUP00000030947	420 (aa)	XP_022614303	UPI000BBE778C

Gene Model

Click here to download ENSSDUG00000022279's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022279's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022279	polr1e	96	46.437	ENSG00000137054	POLR1E	96	46.437	Homo_sapiens
ENSSDUG00000022279	polr1e	99	73.798	ENSAPOG00000012452	polr1e	100	73.798	Acanthochromis_polyacanthus
ENSSDUG00000022279	polr1e	97	41.630	ENSAMEG00000010193	POLR1E	94	41.630	Ailuropoda_melanoleuca
ENSSDUG00000022279	polr1e	99	70.096	ENSACIG00000009884	polr1e	99	73.791	Amphilophus_citrinellus
ENSSDUG00000022279	polr1e	99	80.288	ENSAOCG00000005665	polr1e	100	80.288	Amphiprion_ocellaris
ENSSDUG00000022279	polr1e	99	80.769	ENSAPEG00000020581	polr1e	100	80.769	Amphiprion_percula
ENSSDUG00000022279	polr1e	99	83.413	ENSATEG00000020609	polr1e	100	83.413	Anabas_testudineus
ENSSDUG00000022279	polr1e	80	39.948	ENSAPLG00000010340	POLR1E	100	39.948	Anas_platyrhynchos
ENSSDUG00000022279	polr1e	99	45.606	ENSANAG00000038046	POLR1E	99	45.606	Aotus_nancymaae
ENSSDUG00000022279	polr1e	100	78.571	ENSACLG00000013685	polr1e	100	78.571	Astatotilapia_calliptera
ENSSDUG00000022279	polr1e	99	57.349	ENSAMXG00000018181	polr1e	99	57.349	Astyanax_mexicanus
ENSSDUG00000022279	polr1e	97	47.794	ENSBTAG00000012243	POLR1E	97	47.794	Bos_taurus
ENSSDUG00000022279	polr1e	93	45.340	ENSCJAG00000010512	POLR1E	94	47.230	Callithrix_jacchus
ENSSDUG00000022279	polr1e	97	45.588	ENSCAFG00000002377	POLR1E	97	45.588	Canis_familiaris
ENSSDUG00000022279	polr1e	97	45.588	ENSCAFG00020017851	POLR1E	97	45.588	Canis_lupus_dingo
ENSSDUG00000022279	polr1e	97	47.549	ENSCHIG00000019479	POLR1E	97	47.549	Capra_hircus
ENSSDUG00000022279	polr1e	99	44.656	ENSTSYG00000002075	POLR1E	99	44.656	Carlito_syrichta
ENSSDUG00000022279	polr1e	69	42.955	ENSCAPG00000015653	POLR1E	99	42.955	Cavia_aperea
ENSSDUG00000022279	polr1e	97	46.944	ENSCPOG00000009965	POLR1E	97	46.944	Cavia_porcellus
ENSSDUG00000022279	polr1e	97	42.157	ENSCCAG00000029460	POLR1E	96	42.157	Cebus_capucinus
ENSSDUG00000022279	polr1e	96	46.683	ENSCATG00000031732	POLR1E	96	52.381	Cercocebus_atys
ENSSDUG00000022279	polr1e	87	47.814	ENSCLAG00000012701	POLR1E	96	47.814	Chinchilla_lanigera
ENSSDUG00000022279	polr1e	96	46.683	ENSCSAG00000010782	POLR1E	96	46.683	Chlorocebus_sabaeus
ENSSDUG00000022279	polr1e	94	39.141	ENSCHOG00000013024	POLR1E	82	39.141	Choloepus_hoffmanni
ENSSDUG00000022279	polr1e	99	46.651	ENSCPBG00000006923	POLR1E	99	46.651	Chrysemys_picta_bellii
ENSSDUG00000022279	polr1e	96	47.174	ENSCANG00000036112	POLR1E	96	53.175	Colobus_angolensis_palliatus
ENSSDUG00000022279	polr1e	100	43.602	ENSCGRG00001006197	Polr1e	97	43.602	Cricetulus_griseus_chok1gshd
ENSSDUG00000022279	polr1e	100	43.128	ENSCGRG00000006430	Polr1e	97	43.128	Cricetulus_griseus_crigri
ENSSDUG00000022279	polr1e	99	71.566	ENSCSEG00000005121	polr1e	99	71.566	Cynoglossus_semilaevis
ENSSDUG00000022279	polr1e	99	75.240	ENSCVAG00000019759	polr1e	100	75.240	Cyprinodon_variegatus
ENSSDUG00000022279	polr1e	96	57.673	ENSDARG00000006434	polr1e	100	57.452	Danio_rerio
ENSSDUG00000022279	polr1e	97	38.950	ENSDNOG00000010257	POLR1E	97	38.950	Dasypus_novemcinctus
ENSSDUG00000022279	polr1e	82	43.678	ENSETEG00000018204	POLR1E	96	43.966	Echinops_telfairi
ENSSDUG00000022279	polr1e	97	46.078	ENSEASG00005000675	POLR1E	97	46.078	Equus_asinus_asinus
ENSSDUG00000022279	polr1e	97	46.078	ENSECAG00000014669	POLR1E	97	46.078	Equus_caballus
ENSSDUG00000022279	polr1e	94	41.058	ENSEEUG00000011928	POLR1E	84	41.058	Erinaceus_europaeus
ENSSDUG00000022279	polr1e	99	68.496	ENSELUG00000008150	polr1e	99	68.496	Esox_lucius
ENSSDUG00000022279	polr1e	99	44.893	ENSFCAG00000013081	POLR1E	99	44.893	Felis_catus
ENSSDUG00000022279	polr1e	94	44.888	ENSFALG00000012950	POLR1E	99	44.888	Ficedula_albicollis
ENSSDUG00000022279	polr1e	97	48.529	ENSFDAG00000016917	POLR1E	97	48.529	Fukomys_damarensis
ENSSDUG00000022279	polr1e	99	74.580	ENSFHEG00000009801	polr1e	100	74.580	Fundulus_heteroclitus
ENSSDUG00000022279	polr1e	98	56.429	ENSGMOG00000003336	POLR1E	99	56.429	Gadus_morhua
ENSSDUG00000022279	polr1e	97	44.819	ENSGALG00000005395	POLR1E	98	44.819	Gallus_gallus
ENSSDUG00000022279	polr1e	99	74.038	ENSGAFG00000004850	polr1e	100	74.038	Gambusia_affinis
ENSSDUG00000022279	polr1e	99	71.599	ENSGACG00000016087	polr1e	100	71.599	Gasterosteus_aculeatus
ENSSDUG00000022279	polr1e	96	42.892	ENSGAGG00000001659	POLR1E	99	42.721	Gopherus_agassizii
ENSSDUG00000022279	polr1e	99	45.476	ENSGGOG00000001882	POLR1E	99	49.640	Gorilla_gorilla
ENSSDUG00000022279	polr1e	100	78.571	ENSHBUG00000002559	polr1e	100	78.571	Haplochromis_burtoni
ENSSDUG00000022279	polr1e	97	47.794	ENSHGLG00000002036	POLR1E	97	47.794	Heterocephalus_glaber_female
ENSSDUG00000022279	polr1e	97	48.039	ENSHGLG00100012784	POLR1E	97	48.039	Heterocephalus_glaber_male
ENSSDUG00000022279	polr1e	99	72.837	ENSHCOG00000002774	polr1e	100	73.558	Hippocampus_comes
ENSSDUG00000022279	polr1e	99	56.490	ENSIPUG00000003019	polr1e	99	56.490	Ictalurus_punctatus
ENSSDUG00000022279	polr1e	99	44.976	ENSSTOG00000009810	POLR1E	99	44.976	Ictidomys_tridecemlineatus
ENSSDUG00000022279	polr1e	98	46.506	ENSJJAG00000020731	Polr1e	95	46.506	Jaculus_jaculus
ENSSDUG00000022279	polr1e	99	76.683	ENSKMAG00000000046	polr1e	100	76.683	Kryptolebias_marmoratus
ENSSDUG00000022279	polr1e	99	78.998	ENSLBEG00000003104	polr1e	99	78.998	Labrus_bergylta
ENSSDUG00000022279	polr1e	85	50.964	ENSLACG00000003416	POLR1E	99	50.964	Latimeria_chalumnae
ENSSDUG00000022279	polr1e	99	52.619	ENSLOCG00000012859	polr1e	99	52.619	Lepisosteus_oculatus
ENSSDUG00000022279	polr1e	97	46.814	ENSLAFG00000012831	POLR1E	96	46.814	Loxodonta_africana
ENSSDUG00000022279	polr1e	96	46.683	ENSMFAG00000045465	POLR1E	96	52.381	Macaca_fascicularis
ENSSDUG00000022279	polr1e	96	46.683	ENSMMUG00000017892	POLR1E	96	52.381	Macaca_mulatta
ENSSDUG00000022279	polr1e	96	42.959	ENSMNEG00000040283	POLR1E	96	42.959	Macaca_nemestrina
ENSSDUG00000022279	polr1e	96	46.683	ENSMLEG00000031135	POLR1E	96	52.381	Mandrillus_leucophaeus
ENSSDUG00000022279	polr1e	99	78.520	ENSMAMG00000001260	polr1e	99	78.520	Mastacembelus_armatus
ENSSDUG00000022279	polr1e	100	78.810	ENSMZEG00005021536	polr1e	100	78.810	Maylandia_zebra
ENSSDUG00000022279	polr1e	97	45.588	ENSMAUG00000021044	Polr1e	93	45.588	Mesocricetus_auratus
ENSSDUG00000022279	polr1e	97	46.324	ENSMICG00000003673	POLR1E	97	46.324	Microcebus_murinus
ENSSDUG00000022279	polr1e	100	43.839	ENSMOCG00000012920	Polr1e	97	43.839	Microtus_ochrogaster
ENSSDUG00000022279	polr1e	99	79.376	ENSMMOG00000007391	polr1e	100	79.376	Mola_mola
ENSSDUG00000022279	polr1e	95	46.269	ENSMODG00000002884	POLR1E	98	46.269	Monodelphis_domestica
ENSSDUG00000022279	polr1e	100	81.429	ENSMALG00000002665	polr1e	100	81.429	Monopterus_albus
ENSSDUG00000022279	polr1e	97	44.499	MGP_CAROLIEiJ_G0025967	Polr1e	98	43.860	Mus_caroli
ENSSDUG00000022279	polr1e	97	44.878	ENSMUSG00000028318	Polr1e	97	44.250	Mus_musculus
ENSSDUG00000022279	polr1e	98	45.521	MGP_PahariEiJ_G0024114	Polr1e	98	45.250	Mus_pahari
ENSSDUG00000022279	polr1e	97	44.499	MGP_SPRETEiJ_G0026930	Polr1e	98	43.860	Mus_spretus
ENSSDUG00000022279	polr1e	97	41.048	ENSMPUG00000006040	POLR1E	97	39.216	Mustela_putorius_furo
ENSSDUG00000022279	polr1e	97	46.814	ENSMLUG00000012688	POLR1E	93	46.814	Myotis_lucifugus
ENSSDUG00000022279	polr1e	97	46.814	ENSNGAG00000002520	Polr1e	93	46.814	Nannospalax_galili
ENSSDUG00000022279	polr1e	100	78.810	ENSNBRG00000016822	polr1e	100	78.810	Neolamprologus_brichardi
ENSSDUG00000022279	polr1e	96	46.192	ENSNLEG00000003616	POLR1E	96	53.175	Nomascus_leucogenys
ENSSDUG00000022279	polr1e	72	51.111	ENSMEUG00000015372	-	80	51.111	Notamacropus_eugenii
ENSSDUG00000022279	polr1e	85	40.278	ENSOPRG00000014206	POLR1E	99	40.278	Ochotona_princeps
ENSSDUG00000022279	polr1e	97	47.549	ENSODEG00000014565	POLR1E	94	47.549	Octodon_degus
ENSSDUG00000022279	polr1e	100	79.286	ENSONIG00000008921	polr1e	100	79.286	Oreochromis_niloticus
ENSSDUG00000022279	polr1e	99	44.418	ENSOCUG00000024773	POLR1E	99	44.418	Oryctolagus_cuniculus
ENSSDUG00000022279	polr1e	99	72.115	ENSORLG00000005143	polr1e	100	72.115	Oryzias_latipes
ENSSDUG00000022279	polr1e	92	69.948	ENSORLG00020007271	polr1e	99	69.948	Oryzias_latipes_hni
ENSSDUG00000022279	polr1e	99	72.115	ENSORLG00015000137	polr1e	100	72.115	Oryzias_latipes_hsok
ENSSDUG00000022279	polr1e	99	69.928	ENSOMEG00000013264	polr1e	99	69.928	Oryzias_melastigma
ENSSDUG00000022279	polr1e	97	45.098	ENSOGAG00000012981	POLR1E	94	45.098	Otolemur_garnettii
ENSSDUG00000022279	polr1e	97	47.794	ENSOARG00000011465	POLR1E	93	47.794	Ovis_aries
ENSSDUG00000022279	polr1e	96	46.437	ENSPPAG00000034566	POLR1E	96	53.175	Pan_paniscus
ENSSDUG00000022279	polr1e	99	45.131	ENSPPRG00000005649	POLR1E	99	45.131	Panthera_pardus
ENSSDUG00000022279	polr1e	99	45.131	ENSPTIG00000009774	POLR1E	99	45.131	Panthera_tigris_altaica
ENSSDUG00000022279	polr1e	96	46.437	ENSPTRG00000020944	POLR1E	96	53.175	Pan_troglodytes
ENSSDUG00000022279	polr1e	96	46.683	ENSPANG00000025563	POLR1E	96	52.381	Papio_anubis
ENSSDUG00000022279	polr1e	99	58.195	ENSPKIG00000003562	polr1e	99	58.195	Paramormyrops_kingsleyae
ENSSDUG00000022279	polr1e	97	44.254	ENSPSIG00000003274	POLR1E	95	44.743	Pelodiscus_sinensis
ENSSDUG00000022279	polr1e	94	66.414	ENSPMGG00000024169	polr1e	96	66.414	Periophthalmus_magnuspinnatus
ENSSDUG00000022279	polr1e	99	37.470	ENSPEMG00000022300	-	96	37.470	Peromyscus_maniculatus_bairdii
ENSSDUG00000022279	polr1e	99	44.656	ENSPEMG00000019151	-	96	44.656	Peromyscus_maniculatus_bairdii
ENSSDUG00000022279	polr1e	98	46.172	ENSPCIG00000014798	POLR1E	99	46.172	Phascolarctos_cinereus
ENSSDUG00000022279	polr1e	99	69.820	ENSPFOG00000019627	polr1e	99	69.820	Poecilia_formosa
ENSSDUG00000022279	polr1e	99	74.038	ENSPLAG00000022679	polr1e	100	74.038	Poecilia_latipinna
ENSSDUG00000022279	polr1e	86	75.278	ENSPMEG00000022123	polr1e	93	75.278	Poecilia_mexicana
ENSSDUG00000022279	polr1e	99	72.837	ENSPREG00000009470	polr1e	100	72.837	Poecilia_reticulata
ENSSDUG00000022279	polr1e	96	46.437	ENSPPYG00000019061	POLR1E	96	46.437	Pongo_abelii
ENSSDUG00000022279	polr1e	50	41.232	ENSPCAG00000004891	POLR1E	69	41.232	Procavia_capensis
ENSSDUG00000022279	polr1e	97	46.324	ENSPCOG00000027448	POLR1E	97	46.324	Propithecus_coquereli
ENSSDUG00000022279	polr1e	95	45.885	ENSPVAG00000007940	POLR1E	84	45.885	Pteropus_vampyrus
ENSSDUG00000022279	polr1e	100	78.810	ENSPNYG00000001032	polr1e	100	78.810	Pundamilia_nyererei
ENSSDUG00000022279	polr1e	100	55.476	ENSPNAG00000006987	polr1e	100	55.476	Pygocentrus_nattereri
ENSSDUG00000022279	polr1e	97	44.118	ENSRNOG00000012664	Polr1e	93	44.118	Rattus_norvegicus
ENSSDUG00000022279	polr1e	94	46.734	ENSRBIG00000034214	POLR1E	99	47.368	Rhinopithecus_bieti
ENSSDUG00000022279	polr1e	96	46.683	ENSRROG00000031986	POLR1E	96	52.381	Rhinopithecus_roxellana
ENSSDUG00000022279	polr1e	96	46.437	ENSSBOG00000021415	POLR1E	96	46.437	Saimiri_boliviensis_boliviensis
ENSSDUG00000022279	polr1e	82	46.377	ENSSHAG00000016084	POLR1E	95	46.377	Sarcophilus_harrisii
ENSSDUG00000022279	polr1e	99	60.192	ENSSFOG00015002293	polr1e	99	60.192	Scleropages_formosus
ENSSDUG00000022279	polr1e	99	82.578	ENSSMAG00000011672	polr1e	94	82.578	Scophthalmus_maximus
ENSSDUG00000022279	polr1e	100	97.143	ENSSLDG00000024918	polr1e	100	97.143	Seriola_lalandi_dorsalis
ENSSDUG00000022279	polr1e	55	40.948	ENSSARG00000009810	-	58	40.948	Sorex_araneus
ENSSDUG00000022279	polr1e	99	43.675	ENSSPUG00000009499	POLR1E	100	43.675	Sphenodon_punctatus
ENSSDUG00000022279	polr1e	99	81.250	ENSSPAG00000021240	polr1e	100	81.250	Stegastes_partitus
ENSSDUG00000022279	polr1e	97	45.098	ENSSSCG00000005347	POLR1E	97	45.098	Sus_scrofa
ENSSDUG00000022279	polr1e	94	39.732	ENSTGUG00000007169	POLR1E	100	39.732	Taeniopygia_guttata
ENSSDUG00000022279	polr1e	99	72.010	ENSTRUG00000020779	polr1e	99	72.010	Takifugu_rubripes
ENSSDUG00000022279	polr1e	99	75.481	ENSTNIG00000017812	polr1e	99	75.481	Tetraodon_nigroviridis
ENSSDUG00000022279	polr1e	94	47.222	ENSTBEG00000013786	POLR1E	84	47.222	Tupaia_belangeri
ENSSDUG00000022279	polr1e	94	45.363	ENSTTRG00000008294	POLR1E	85	45.137	Tursiops_truncatus
ENSSDUG00000022279	polr1e	97	46.324	ENSUAMG00000012474	POLR1E	96	48.732	Ursus_americanus
ENSSDUG00000022279	polr1e	97	46.324	ENSUMAG00000011496	POLR1E	97	46.324	Ursus_maritimus
ENSSDUG00000022279	polr1e	86	41.370	ENSVPAG00000009048	POLR1E	84	41.370	Vicugna_pacos
ENSSDUG00000022279	polr1e	97	45.588	ENSVVUG00000019954	POLR1E	97	45.588	Vulpes_vulpes
ENSSDUG00000022279	polr1e	99	43.839	ENSXETG00000006533	polr1e	99	43.839	Xenopus_tropicalis
ENSSDUG00000022279	polr1e	99	71.394	ENSXCOG00000013706	polr1e	100	71.394	Xiphophorus_couchianus
ENSSDUG00000022279	polr1e	99	76.202	ENSXMAG00000012484	polr1e	100	76.202	Xiphophorus_maculatus