EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000022299 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 5319 bases
Position: chrBDQW01000044.1:4112392-4117710
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000030978	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000031514	-	786	-	ENSSDUP00000030978	261 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000022299's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022299's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000022299	-	72	33.838	ENSSDUG00000003691	-	80	33.838
ENSSDUG00000022299	-	72	34.158	ENSSDUG00000001415	-	72	34.158
ENSSDUG00000022299	-	78	35.185	ENSSDUG00000020760	-	69	35.185
ENSSDUG00000022299	-	76	31.220	ENSSDUG00000016775	-	68	31.220
ENSSDUG00000022299	-	78	33.645	ENSSDUG00000023286	-	69	33.032
ENSSDUG00000022299	-	54	33.103	ENSSDUG00000021711	-	81	33.103
ENSSDUG00000022299	-	77	33.491	ENSSDUG00000003711	-	70	33.491
ENSSDUG00000022299	-	61	33.333	ENSSDUG00000016607	-	57	33.533
ENSSDUG00000022299	-	71	39.196	ENSSDUG00000016605	-	76	36.681
ENSSDUG00000022299	-	72	39.000	ENSSDUG00000013443	-	86	36.179
ENSSDUG00000022299	-	97	33.582	ENSSDUG00000020733	-	91	33.582
ENSSDUG00000022299	-	72	34.158	ENSSDUG00000001369	-	72	34.158
ENSSDUG00000022299	-	76	32.057	ENSSDUG00000005123	-	63	32.051
ENSSDUG00000022299	-	68	33.149	ENSSDUG00000018996	-	99	31.278
ENSSDUG00000022299	-	84	32.751	ENSSDUG00000002104	-	69	32.751
ENSSDUG00000022299	-	90	31.048	ENSSDUG00000016791	-	88	31.048
ENSSDUG00000022299	-	77	33.945	ENSSDUG00000023239	-	63	33.945
ENSSDUG00000022299	-	73	35.468	ENSSDUG00000003683	-	65	35.622
ENSSDUG00000022299	-	75	37.321	ENSSDUG00000005219	-	62	35.366
ENSSDUG00000022299	-	72	33.831	ENSSDUG00000001383	-	64	33.831
ENSSDUG00000022299	-	90	31.818	ENSSDUG00000016809	-	66	32.353
ENSSDUG00000022299	-	72	38.624	ENSSDUG00000018096	si:dkey-110g7.8	71	38.191
ENSSDUG00000022299	-	82	30.180	ENSSDUG00000019892	-	74	30.180
ENSSDUG00000022299	-	72	31.863	ENSSDUG00000016927	-	72	31.863
ENSSDUG00000022299	-	80	35.681	ENSSDUG00000023540	-	86	35.681
ENSSDUG00000022299	-	87	31.624	ENSSDUG00000023838	-	80	31.915
ENSSDUG00000022299	-	84	32.895	ENSSDUG00000023839	-	75	33.188
ENSSDUG00000022299	-	78	36.449	ENSSDUG00000020772	-	71	36.449
ENSSDUG00000022299	-	72	35.751	ENSSDUG00000009253	-	52	33.197
ENSSDUG00000022299	-	86	30.573	ENSSDUG00000021006	-	91	30.573
ENSSDUG00000022299	-	80	37.054	ENSSDUG00000016459	-	87	37.104
ENSSDUG00000022299	-	85	36.842	ENSSDUG00000021707	-	78	36.842
ENSSDUG00000022299	-	61	37.209	ENSSDUG00000016612	-	78	37.209
ENSSDUG00000022299	-	83	37.500	ENSSDUG00000004973	-	70	34.661
ENSSDUG00000022299	-	76	32.843	ENSSDUG00000003676	-	80	31.621
ENSSDUG00000022299	-	85	32.843	ENSSDUG00000005095	-	67	31.250
ENSSDUG00000022299	-	84	34.234	ENSSDUG00000004552	-	91	34.234
ENSSDUG00000022299	-	72	38.308	ENSSDUG00000009231	-	91	34.979
ENSSDUG00000022299	-	87	33.333	ENSSDUG00000004903	-	67	33.333
ENSSDUG00000022299	-	74	30.918	ENSSDUG00000023612	-	56	30.918
ENSSDUG00000022299	-	86	34.440	ENSSDUG00000023613	-	71	34.440

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022299	-	93	75.102	ENSAPOG00000019154	-	56	75.102	Acanthochromis_polyacanthus
ENSSDUG00000022299	-	93	37.815	ENSAPOG00000006502	-	58	37.815	Acanthochromis_polyacanthus
ENSSDUG00000022299	-	68	43.820	ENSACIG00000007737	-	71	44.324	Amphilophus_citrinellus
ENSSDUG00000022299	-	72	41.176	ENSACIG00000009811	-	79	41.176	Amphilophus_citrinellus
ENSSDUG00000022299	-	79	73.430	ENSACIG00000007725	-	77	73.430	Amphilophus_citrinellus
ENSSDUG00000022299	-	89	43.220	ENSAOCG00000004579	-	84	43.541	Amphiprion_ocellaris
ENSSDUG00000022299	-	75	37.864	ENSAOCG00000003425	-	77	37.864	Amphiprion_ocellaris
ENSSDUG00000022299	-	76	42.553	ENSAPEG00000014403	-	70	39.000	Amphiprion_percula
ENSSDUG00000022299	-	94	75.510	ENSAPEG00000001491	-	69	75.510	Amphiprion_percula
ENSSDUG00000022299	-	82	35.514	ENSATEG00000023053	-	93	35.514	Anabas_testudineus
ENSSDUG00000022299	-	90	42.647	ENSATEG00000015654	-	82	39.095	Anabas_testudineus
ENSSDUG00000022299	-	97	42.373	ENSACLG00000014795	-	82	42.373	Astatotilapia_calliptera
ENSSDUG00000022299	-	93	42.917	ENSAMXG00000030744	-	95	42.917	Astyanax_mexicanus
ENSSDUG00000022299	-	68	34.270	ENSAMXG00000009216	-	86	34.270	Astyanax_mexicanus
ENSSDUG00000022299	-	89	38.739	ENSAMXG00000006064	-	78	38.739	Astyanax_mexicanus
ENSSDUG00000022299	-	73	35.025	ENSAMXG00000026085	-	93	31.660	Astyanax_mexicanus
ENSSDUG00000022299	-	92	40.092	ENSAMXG00000019109	-	94	40.092	Astyanax_mexicanus
ENSSDUG00000022299	-	89	42.932	ENSAMXG00000021387	-	69	42.932	Astyanax_mexicanus
ENSSDUG00000022299	-	85	38.117	ENSAMXG00000033117	-	95	38.117	Astyanax_mexicanus
ENSSDUG00000022299	-	94	72.199	ENSCSEG00000021519	-	85	59.302	Cynoglossus_semilaevis
ENSSDUG00000022299	-	71	39.683	ENSCVAG00000005778	-	66	39.683	Cyprinodon_variegatus
ENSSDUG00000022299	-	95	70.161	ENSCVAG00000003054	-	85	70.161	Cyprinodon_variegatus
ENSSDUG00000022299	-	83	43.182	ENSCVAG00000012268	-	72	43.182	Cyprinodon_variegatus
ENSSDUG00000022299	-	83	43.119	ENSDARG00000102683	CR626941.1	82	43.119	Danio_rerio
ENSSDUG00000022299	-	85	55.455	ENSDARG00000063481	si:ch211-214j24.15	65	53.191	Danio_rerio
ENSSDUG00000022299	-	70	36.898	ENSELUG00000018709	-	69	35.897	Esox_lucius
ENSSDUG00000022299	-	71	52.151	ENSELUG00000018192	-	88	52.151	Esox_lucius
ENSSDUG00000022299	-	85	31.222	ENSELUG00000003217	-	93	31.222	Esox_lucius
ENSSDUG00000022299	-	72	53.191	ENSELUG00000024502	-	69	53.191	Esox_lucius
ENSSDUG00000022299	-	72	78.723	ENSFHEG00000023334	-	73	78.723	Fundulus_heteroclitus
ENSSDUG00000022299	-	83	38.532	ENSFHEG00000020783	-	88	38.532	Fundulus_heteroclitus
ENSSDUG00000022299	-	75	46.305	ENSGMOG00000001626	-	100	46.111	Gadus_morhua
ENSSDUG00000022299	-	77	37.714	ENSGAFG00000020826	-	85	37.714	Gambusia_affinis
ENSSDUG00000022299	-	89	66.379	ENSHBUG00000008326	-	99	65.145	Haplochromis_burtoni
ENSSDUG00000022299	-	75	41.885	ENSHBUG00000001242	-	55	41.885	Haplochromis_burtoni
ENSSDUG00000022299	-	82	42.661	ENSHBUG00000016284	-	99	42.661	Haplochromis_burtoni
ENSSDUG00000022299	-	92	32.819	ENSIPUG00000013342	-	83	33.977	Ictalurus_punctatus
ENSSDUG00000022299	-	92	75.519	ENSKMAG00000009600	-	85	75.519	Kryptolebias_marmoratus
ENSSDUG00000022299	-	92	39.429	ENSKMAG00000014764	-	94	39.429	Kryptolebias_marmoratus
ENSSDUG00000022299	-	71	41.398	ENSKMAG00000014605	-	77	37.395	Kryptolebias_marmoratus
ENSSDUG00000022299	-	92	42.291	ENSKMAG00000004774	-	80	42.291	Kryptolebias_marmoratus
ENSSDUG00000022299	-	93	38.525	ENSLBEG00000019652	-	82	38.525	Labrus_bergylta
ENSSDUG00000022299	-	85	38.839	ENSLOCG00000016496	-	63	38.839	Lepisosteus_oculatus
ENSSDUG00000022299	-	77	44.019	ENSLOCG00000012075	-	96	44.019	Lepisosteus_oculatus
ENSSDUG00000022299	-	74	45.876	ENSLOCG00000000082	-	88	41.277	Lepisosteus_oculatus
ENSSDUG00000022299	-	85	43.891	ENSLOCG00000018072	-	95	44.304	Lepisosteus_oculatus
ENSSDUG00000022299	-	77	44.335	ENSLOCG00000000385	-	84	37.743	Lepisosteus_oculatus
ENSSDUG00000022299	-	70	47.568	ENSLOCG00000017852	-	82	42.544	Lepisosteus_oculatus
ENSSDUG00000022299	-	79	42.718	ENSLOCG00000000517	-	73	41.631	Lepisosteus_oculatus
ENSSDUG00000022299	-	93	77.872	ENSMAMG00000021969	-	59	77.872	Mastacembelus_armatus
ENSSDUG00000022299	-	95	37.736	ENSMAMG00000015600	-	80	40.183	Mastacembelus_armatus
ENSSDUG00000022299	-	88	35.808	ENSMAMG00000021970	-	100	35.808	Mastacembelus_armatus
ENSSDUG00000022299	-	87	40.517	ENSMMOG00000012876	-	72	40.517	Mola_mola
ENSSDUG00000022299	-	72	37.629	ENSMMOG00000016864	-	73	38.144	Mola_mola
ENSSDUG00000022299	-	89	33.452	ENSMMOG00000016860	-	90	33.452	Mola_mola
ENSSDUG00000022299	-	88	36.957	ENSNBRG00000002136	-	78	36.957	Neolamprologus_brichardi
ENSSDUG00000022299	-	93	69.583	ENSORLG00000002537	-	68	69.583	Oryzias_latipes
ENSSDUG00000022299	-	92	39.256	ENSORLG00000002031	-	72	39.256	Oryzias_latipes
ENSSDUG00000022299	-	79	34.951	ENSORLG00020017387	-	88	34.951	Oryzias_latipes_hni
ENSSDUG00000022299	-	92	41.053	ENSORLG00020008323	-	66	41.053	Oryzias_latipes_hni
ENSSDUG00000022299	-	93	42.449	ENSORLG00020008286	-	92	42.449	Oryzias_latipes_hni
ENSSDUG00000022299	-	93	71.429	ENSORLG00020011284	-	81	71.429	Oryzias_latipes_hni
ENSSDUG00000022299	-	93	69.456	ENSORLG00015004110	-	68	69.456	Oryzias_latipes_hsok
ENSSDUG00000022299	-	66	38.728	ENSORLG00015023234	-	89	38.728	Oryzias_latipes_hsok
ENSSDUG00000022299	-	92	38.843	ENSORLG00015004522	-	70	38.843	Oryzias_latipes_hsok
ENSSDUG00000022299	-	93	41.667	ENSOMEG00000010594	-	86	43.548	Oryzias_melastigma
ENSSDUG00000022299	-	94	69.583	ENSOMEG00000020433	-	90	69.583	Oryzias_melastigma
ENSSDUG00000022299	-	75	49.231	ENSPKIG00000017193	-	84	49.231	Paramormyrops_kingsleyae
ENSSDUG00000022299	-	90	51.064	ENSPKIG00000017688	-	83	51.064	Paramormyrops_kingsleyae
ENSSDUG00000022299	-	87	32.751	ENSPMGG00000014056	-	88	32.751	Periophthalmus_magnuspinnatus
ENSSDUG00000022299	-	82	65.278	ENSPMGG00000014055	-	88	65.278	Periophthalmus_magnuspinnatus
ENSSDUG00000022299	-	73	38.462	ENSPMGG00000017993	-	77	38.462	Periophthalmus_magnuspinnatus
ENSSDUG00000022299	-	93	41.525	ENSPFOG00000012732	-	79	41.525	Poecilia_formosa
ENSSDUG00000022299	-	92	42.654	ENSPFOG00000015875	-	84	42.654	Poecilia_formosa
ENSSDUG00000022299	-	92	43.915	ENSPFOG00000022853	-	96	43.915	Poecilia_formosa
ENSSDUG00000022299	-	89	45.500	ENSPFOG00000015865	-	95	45.500	Poecilia_formosa
ENSSDUG00000022299	-	79	40.952	ENSPFOG00000005689	si:dkey-185m8.2	74	40.952	Poecilia_formosa
ENSSDUG00000022299	-	91	40.625	ENSPFOG00000016787	-	92	41.081	Poecilia_formosa
ENSSDUG00000022299	-	91	42.009	ENSPFOG00000013109	-	96	42.009	Poecilia_formosa
ENSSDUG00000022299	-	92	42.520	ENSPFOG00000000191	-	74	42.520	Poecilia_formosa
ENSSDUG00000022299	-	92	44.076	ENSPFOG00000013349	-	79	44.076	Poecilia_formosa
ENSSDUG00000022299	-	71	40.741	ENSPFOG00000022479	-	80	40.741	Poecilia_formosa
ENSSDUG00000022299	-	78	37.799	ENSPFOG00000006124	-	86	37.799	Poecilia_formosa
ENSSDUG00000022299	-	89	40.678	ENSPFOG00000015871	-	89	40.678	Poecilia_formosa
ENSSDUG00000022299	-	92	42.449	ENSPLAG00000003020	-	86	42.449	Poecilia_latipinna
ENSSDUG00000022299	-	67	38.286	ENSPLAG00000018911	-	65	38.286	Poecilia_latipinna
ENSSDUG00000022299	-	71	37.566	ENSPLAG00000018664	-	69	37.566	Poecilia_latipinna
ENSSDUG00000022299	-	80	43.784	ENSPLAG00000020776	-	89	43.784	Poecilia_latipinna
ENSSDUG00000022299	-	88	36.797	ENSPLAG00000018606	-	86	36.797	Poecilia_latipinna
ENSSDUG00000022299	-	70	35.498	ENSPLAG00000018692	-	84	36.364	Poecilia_latipinna
ENSSDUG00000022299	-	70	37.321	ENSPMEG00000000724	-	57	37.321	Poecilia_mexicana
ENSSDUG00000022299	-	71	36.508	ENSPMEG00000006334	-	66	36.508	Poecilia_mexicana
ENSSDUG00000022299	-	91	40.529	ENSPMEG00000000604	-	74	40.529	Poecilia_mexicana
ENSSDUG00000022299	-	90	39.916	ENSPMEG00000005912	-	74	39.916	Poecilia_mexicana
ENSSDUG00000022299	-	61	45.122	ENSPMEG00000020252	-	73	45.122	Poecilia_mexicana
ENSSDUG00000022299	-	61	40.373	ENSPMEG00000010605	-	64	40.373	Poecilia_mexicana
ENSSDUG00000022299	-	67	37.714	ENSPMEG00000018950	-	65	37.714	Poecilia_mexicana
ENSSDUG00000022299	-	84	42.222	ENSPMEG00000020297	-	80	42.222	Poecilia_mexicana
ENSSDUG00000022299	-	90	41.256	ENSPREG00000020440	-	73	41.256	Poecilia_reticulata
ENSSDUG00000022299	-	91	40.833	ENSPREG00000001250	-	94	40.833	Poecilia_reticulata
ENSSDUG00000022299	-	85	44.395	ENSPREG00000001530	-	76	44.395	Poecilia_reticulata
ENSSDUG00000022299	-	88	38.362	ENSPNYG00000010004	-	80	38.362	Pundamilia_nyererei
ENSSDUG00000022299	-	69	34.921	ENSPNAG00000025850	-	85	33.333	Pygocentrus_nattereri
ENSSDUG00000022299	-	87	40.426	ENSPNAG00000013132	-	68	40.426	Pygocentrus_nattereri
ENSSDUG00000022299	-	84	40.529	ENSPNAG00000019899	-	92	40.529	Pygocentrus_nattereri
ENSSDUG00000022299	-	89	48.498	ENSPNAG00000002097	-	94	48.498	Pygocentrus_nattereri
ENSSDUG00000022299	-	90	40.741	ENSPNAG00000014932	-	67	40.741	Pygocentrus_nattereri
ENSSDUG00000022299	-	84	41.096	ENSSFOG00015002420	-	82	41.096	Scleropages_formosus
ENSSDUG00000022299	-	87	35.345	ENSSFOG00015002503	-	88	35.345	Scleropages_formosus
ENSSDUG00000022299	-	85	30.126	ENSSFOG00015002507	-	93	30.126	Scleropages_formosus
ENSSDUG00000022299	-	94	71.429	ENSSMAG00000012187	-	68	71.429	Scophthalmus_maximus
ENSSDUG00000022299	-	82	45.918	ENSSLDG00000009168	-	98	43.548	Seriola_lalandi_dorsalis
ENSSDUG00000022299	-	94	95.082	ENSSLDG00000005786	-	67	95.082	Seriola_lalandi_dorsalis
ENSSDUG00000022299	-	92	42.922	ENSSLDG00000010531	-	98	42.041	Seriola_lalandi_dorsalis
ENSSDUG00000022299	-	76	41.206	ENSSPAG00000015927	-	80	41.206	Stegastes_partitus
ENSSDUG00000022299	-	98	73.643	ENSSPAG00000017616	-	87	73.643	Stegastes_partitus
ENSSDUG00000022299	-	88	40.851	ENSTRUG00000018070	-	79	40.336	Takifugu_rubripes
ENSSDUG00000022299	-	92	37.917	ENSTRUG00000020422	-	82	37.917	Takifugu_rubripes
ENSSDUG00000022299	-	84	51.556	ENSTNIG00000004220	-	93	51.556	Tetraodon_nigroviridis
ENSSDUG00000022299	-	88	57.826	ENSTNIG00000004275	-	98	57.826	Tetraodon_nigroviridis
ENSSDUG00000022299	-	79	41.509	ENSXCOG00000009005	-	90	40.249	Xiphophorus_couchianus
ENSSDUG00000022299	-	87	41.304	ENSXCOG00000018421	-	99	41.304	Xiphophorus_couchianus
ENSSDUG00000022299	-	97	40.476	ENSXMAG00000023360	-	82	40.476	Xiphophorus_maculatus