EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000022311 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-93g23.2
Alias: -
Full Name: si:ch211-93g23.2
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 2106 bases
Position: chrBDQW01000019.1:403806-405911
Accession: ZDB-GENE-090312-164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000031004	Methyltransf_31	PF13847.6	7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000031540	-	483	-	ENSSDUP00000031004	160 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000022311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022311's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000022311	si:ch211-93g23.2	99	50.909	ENSSDUG00000010278	zgc:162396	60	50.909
ENSSDUG00000022311	si:ch211-93g23.2	98	62.893	ENSSDUG00000010324	zgc:162780	59	62.893

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022311	si:ch211-93g23.2	98	78.882	ENSAPOG00000008054	si:ch211-93g23.2	59	78.882	Acanthochromis_polyacanthus
ENSSDUG00000022311	si:ch211-93g23.2	98	63.804	ENSAPOG00000015391	zgc:162780	59	63.804	Acanthochromis_polyacanthus
ENSSDUG00000022311	si:ch211-93g23.2	98	61.350	ENSACIG00000015409	zgc:162780	58	61.350	Amphilophus_citrinellus
ENSSDUG00000022311	si:ch211-93g23.2	99	79.012	ENSACIG00000024058	si:ch211-93g23.2	87	79.012	Amphilophus_citrinellus
ENSSDUG00000022311	si:ch211-93g23.2	98	79.503	ENSAOCG00000000447	-	59	79.503	Amphiprion_ocellaris
ENSSDUG00000022311	si:ch211-93g23.2	98	63.190	ENSAOCG00000004147	zgc:162780	59	63.190	Amphiprion_ocellaris
ENSSDUG00000022311	si:ch211-93g23.2	99	77.019	ENSAPEG00000012843	si:ch211-93g23.2	99	77.019	Amphiprion_percula
ENSSDUG00000022311	si:ch211-93g23.2	98	63.125	ENSAPEG00000008212	zgc:162780	59	63.125	Amphiprion_percula
ENSSDUG00000022311	si:ch211-93g23.2	98	63.804	ENSATEG00000011843	zgc:162780	59	63.804	Anabas_testudineus
ENSSDUG00000022311	si:ch211-93g23.2	98	81.366	ENSACLG00000009543	si:ch211-93g23.2	60	81.366	Astatotilapia_calliptera
ENSSDUG00000022311	si:ch211-93g23.2	98	60.123	ENSACLG00000006922	zgc:162780	59	60.123	Astatotilapia_calliptera
ENSSDUG00000022311	si:ch211-93g23.2	98	60.736	ENSAMXG00000040257	zgc:162780	59	60.736	Astyanax_mexicanus
ENSSDUG00000022311	si:ch211-93g23.2	99	75.309	ENSCVAG00000012310	si:ch211-93g23.2	98	75.309	Cyprinodon_variegatus
ENSSDUG00000022311	si:ch211-93g23.2	98	59.509	ENSCVAG00000021445	zgc:162780	59	59.509	Cyprinodon_variegatus
ENSSDUG00000022311	si:ch211-93g23.2	98	60.494	ENSDARG00000070558	si:ch211-93g23.2	59	60.494	Danio_rerio
ENSSDUG00000022311	si:ch211-93g23.2	98	63.580	ENSDARG00000069548	zgc:162780	59	63.580	Danio_rerio
ENSSDUG00000022311	si:ch211-93g23.2	74	67.742	ENSELUG00000002477	si:ch211-93g23.2	79	67.742	Esox_lucius
ENSSDUG00000022311	si:ch211-93g23.2	98	65.644	ENSELUG00000005357	zgc:162780	58	73.333	Esox_lucius
ENSSDUG00000022311	si:ch211-93g23.2	98	60.123	ENSFHEG00000005204	zgc:162780	59	60.123	Fundulus_heteroclitus
ENSSDUG00000022311	si:ch211-93g23.2	75	66.942	ENSGMOG00000005502	zgc:162780	52	66.942	Gadus_morhua
ENSSDUG00000022311	si:ch211-93g23.2	98	69.182	ENSGAFG00000007683	si:ch211-93g23.2	58	69.182	Gambusia_affinis
ENSSDUG00000022311	si:ch211-93g23.2	98	60.123	ENSGAFG00000018382	zgc:162780	59	60.123	Gambusia_affinis
ENSSDUG00000022311	si:ch211-93g23.2	98	77.301	ENSGACG00000014722	si:ch211-93g23.2	60	77.301	Gasterosteus_aculeatus
ENSSDUG00000022311	si:ch211-93g23.2	98	81.366	ENSHBUG00000004418	si:ch211-93g23.2	95	80.000	Haplochromis_burtoni
ENSSDUG00000022311	si:ch211-93g23.2	98	60.123	ENSHBUG00000000524	zgc:162780	59	60.123	Haplochromis_burtoni
ENSSDUG00000022311	si:ch211-93g23.2	99	64.815	ENSHCOG00000009980	si:ch211-93g23.2	94	65.789	Hippocampus_comes
ENSSDUG00000022311	si:ch211-93g23.2	98	60.123	ENSKMAG00000018418	zgc:162780	58	60.123	Kryptolebias_marmoratus
ENSSDUG00000022311	si:ch211-93g23.2	98	83.125	ENSLBEG00000006987	-	59	83.125	Labrus_bergylta
ENSSDUG00000022311	si:ch211-93g23.2	98	60.736	ENSLBEG00000026521	zgc:162780	59	60.736	Labrus_bergylta
ENSSDUG00000022311	si:ch211-93g23.2	98	82.500	ENSLBEG00000013961	si:ch211-93g23.2	90	82.166	Labrus_bergylta
ENSSDUG00000022311	si:ch211-93g23.2	98	63.190	ENSMAMG00000013237	zgc:162780	59	63.190	Mastacembelus_armatus
ENSSDUG00000022311	si:ch211-93g23.2	98	81.366	ENSMZEG00005014627	si:ch211-93g23.2	60	81.366	Maylandia_zebra
ENSSDUG00000022311	si:ch211-93g23.2	98	60.123	ENSMZEG00005000825	zgc:162780	59	60.123	Maylandia_zebra
ENSSDUG00000022311	si:ch211-93g23.2	99	81.013	ENSMMOG00000019634	si:ch211-93g23.2	95	81.013	Mola_mola
ENSSDUG00000022311	si:ch211-93g23.2	98	61.963	ENSMALG00000012598	zgc:162780	59	61.963	Monopterus_albus
ENSSDUG00000022311	si:ch211-93g23.2	98	61.006	ENSNBRG00000014908	zgc:162780	59	61.006	Neolamprologus_brichardi
ENSSDUG00000022311	si:ch211-93g23.2	98	81.988	ENSNBRG00000019105	si:ch211-93g23.2	92	80.000	Neolamprologus_brichardi
ENSSDUG00000022311	si:ch211-93g23.2	98	81.988	ENSONIG00000013383	si:ch211-93g23.2	60	81.988	Oreochromis_niloticus
ENSSDUG00000022311	si:ch211-93g23.2	98	59.509	ENSONIG00000004462	zgc:162780	59	59.509	Oreochromis_niloticus
ENSSDUG00000022311	si:ch211-93g23.2	98	79.503	ENSORLG00000002372	si:ch211-93g23.2	60	79.503	Oryzias_latipes
ENSSDUG00000022311	si:ch211-93g23.2	98	78.882	ENSORLG00020022021	si:ch211-93g23.2	60	78.882	Oryzias_latipes_hni
ENSSDUG00000022311	si:ch211-93g23.2	98	78.882	ENSORLG00015021473	si:ch211-93g23.2	60	78.882	Oryzias_latipes_hsok
ENSSDUG00000022311	si:ch211-93g23.2	98	61.963	ENSORLG00015008510	zgc:162780	59	61.963	Oryzias_latipes_hsok
ENSSDUG00000022311	si:ch211-93g23.2	98	77.640	ENSOMEG00000013365	si:ch211-93g23.2	60	77.640	Oryzias_melastigma
ENSSDUG00000022311	si:ch211-93g23.2	98	61.963	ENSOMEG00000010679	zgc:162780	59	61.963	Oryzias_melastigma
ENSSDUG00000022311	si:ch211-93g23.2	98	63.580	ENSPKIG00000011610	si:ch211-93g23.2	59	63.580	Paramormyrops_kingsleyae
ENSSDUG00000022311	si:ch211-93g23.2	99	69.136	ENSPMGG00000011829	si:ch211-93g23.2	95	69.136	Periophthalmus_magnuspinnatus
ENSSDUG00000022311	si:ch211-93g23.2	98	61.350	ENSPFOG00000002781	zgc:162780	59	61.350	Poecilia_formosa
ENSSDUG00000022311	si:ch211-93g23.2	98	76.398	ENSPFOG00000013857	si:ch211-93g23.2	59	76.398	Poecilia_formosa
ENSSDUG00000022311	si:ch211-93g23.2	99	76.875	ENSPLAG00000015878	-	98	76.875	Poecilia_latipinna
ENSSDUG00000022311	si:ch211-93g23.2	98	61.350	ENSPLAG00000010255	zgc:162780	59	61.350	Poecilia_latipinna
ENSSDUG00000022311	si:ch211-93g23.2	98	61.350	ENSPMEG00000000022	zgc:162780	62	61.350	Poecilia_mexicana
ENSSDUG00000022311	si:ch211-93g23.2	99	76.875	ENSPMEG00000008837	-	98	76.875	Poecilia_mexicana
ENSSDUG00000022311	si:ch211-93g23.2	98	60.123	ENSPREG00000016480	zgc:162780	58	60.123	Poecilia_reticulata
ENSSDUG00000022311	si:ch211-93g23.2	99	77.019	ENSPREG00000016831	si:ch211-93g23.2	98	77.019	Poecilia_reticulata
ENSSDUG00000022311	si:ch211-93g23.2	98	80.745	ENSPNYG00000009369	si:ch211-93g23.2	95	79.394	Pundamilia_nyererei
ENSSDUG00000022311	si:ch211-93g23.2	98	60.494	ENSPNYG00000009882	zgc:162780	59	60.494	Pundamilia_nyererei
ENSSDUG00000022311	si:ch211-93g23.2	98	59.494	ENSPNAG00000026108	zgc:162780	58	59.494	Pygocentrus_nattereri
ENSSDUG00000022311	si:ch211-93g23.2	98	57.407	ENSSFOG00015018587	si:ch211-93g23.2	59	57.407	Scleropages_formosus
ENSSDUG00000022311	si:ch211-93g23.2	98	65.031	ENSSMAG00000004498	zgc:162780	59	65.031	Scophthalmus_maximus
ENSSDUG00000022311	si:ch211-93g23.2	98	61.350	ENSSLDG00000021444	zgc:162780	63	59.763	Seriola_lalandi_dorsalis
ENSSDUG00000022311	si:ch211-93g23.2	98	93.168	ENSSLDG00000005926	si:ch211-93g23.2	60	93.168	Seriola_lalandi_dorsalis
ENSSDUG00000022311	si:ch211-93g23.2	99	77.848	ENSSPAG00000014251	si:ch211-93g23.2	91	77.848	Stegastes_partitus
ENSSDUG00000022311	si:ch211-93g23.2	98	73.913	ENSTRUG00000014609	si:ch211-93g23.2	59	73.913	Takifugu_rubripes
ENSSDUG00000022311	si:ch211-93g23.2	99	75.309	ENSTNIG00000000686	-	60	75.309	Tetraodon_nigroviridis
ENSSDUG00000022311	si:ch211-93g23.2	99	75.316	ENSXCOG00000020437	si:ch211-93g23.2	97	75.316	Xiphophorus_couchianus
ENSSDUG00000022311	si:ch211-93g23.2	98	59.509	ENSXCOG00000014527	zgc:162780	59	59.509	Xiphophorus_couchianus
ENSSDUG00000022311	si:ch211-93g23.2	98	75.155	ENSXMAG00000007855	si:ch211-93g23.2	59	75.155	Xiphophorus_maculatus
ENSSDUG00000022311	si:ch211-93g23.2	98	59.509	ENSXMAG00000026715	zgc:162780	59	59.509	Xiphophorus_maculatus