EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000022338 (Gene tree)
Gene ID: -
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 8259 bases
Position: chrBDQW01000290.1:2840494-2848752
Accession: 111230927
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000031057	ResIII	PF04851.15	6.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000031593	-	2517	XM_022757824	ENSSDUP00000031057	838 (aa)	XP_022613545	-

Gene Model

Click here to download ENSSDUG00000022338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000022338	smarcad1a	61	38.012	ENSSDUG00000019831	chd1l	51	38.012
ENSSDUG00000022338	smarcad1a	61	30.586	ENSSDUG00000001122	rad54b	50	31.081
ENSSDUG00000022338	smarcad1a	60	30.370	ENSSDUG00000019147	rad54l	64	30.214
ENSSDUG00000022338	smarcad1a	60	35.688	ENSSDUG00000016924	hells	69	35.622

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022338	smarcad1a	84	62.325	ENSG00000163104	SMARCAD1	99	67.340	Homo_sapiens
ENSSDUG00000022338	smarcad1a	99	84.110	ENSAPOG00000011446	smarcad1a	78	83.735	Acanthochromis_polyacanthus
ENSSDUG00000022338	smarcad1a	84	62.256	ENSAMEG00000005844	SMARCAD1	68	62.784	Ailuropoda_melanoleuca
ENSSDUG00000022338	smarcad1a	80	89.355	ENSACIG00000018326	smarcad1a	93	89.339	Amphilophus_citrinellus
ENSSDUG00000022338	smarcad1a	98	84.988	ENSAOCG00000019762	smarcad1a	78	84.597	Amphiprion_ocellaris
ENSSDUG00000022338	smarcad1a	99	84.110	ENSAPEG00000003889	smarcad1a	78	84.578	Amphiprion_percula
ENSSDUG00000022338	smarcad1a	97	85.505	ENSATEG00000015608	smarcad1a	80	86.774	Anabas_testudineus
ENSSDUG00000022338	smarcad1a	76	67.134	ENSAPLG00000004630	SMARCAD1	74	63.483	Anas_platyrhynchos
ENSSDUG00000022338	smarcad1a	76	66.044	ENSACAG00000013554	SMARCAD1	63	66.044	Anolis_carolinensis
ENSSDUG00000022338	smarcad1a	84	62.185	ENSANAG00000020488	SMARCAD1	77	63.415	Aotus_nancymaae
ENSSDUG00000022338	smarcad1a	99	82.895	ENSACLG00000017063	smarcad1a	78	83.353	Astatotilapia_calliptera
ENSSDUG00000022338	smarcad1a	81	71.698	ENSAMXG00000019130	smarcad1b	74	71.988	Astyanax_mexicanus
ENSSDUG00000022338	smarcad1a	84	69.460	ENSAMXG00000015470	smarcad1a	99	69.460	Astyanax_mexicanus
ENSSDUG00000022338	smarcad1a	84	61.892	ENSBTAG00000017061	SMARCAD1	68	62.323	Bos_taurus
ENSSDUG00000022338	smarcad1a	77	42.097	WBGene00010845	M03C11.8	69	41.126	Caenorhabditis_elegans
ENSSDUG00000022338	smarcad1a	84	62.325	ENSCJAG00000006778	SMARCAD1	68	63.558	Callithrix_jacchus
ENSSDUG00000022338	smarcad1a	84	62.396	ENSCAFG00000010026	SMARCAD1	68	62.926	Canis_familiaris
ENSSDUG00000022338	smarcad1a	84	62.396	ENSCAFG00020003994	SMARCAD1	79	62.926	Canis_lupus_dingo
ENSSDUG00000022338	smarcad1a	84	62.204	ENSCHIG00000012905	SMARCAD1	68	62.642	Capra_hircus
ENSSDUG00000022338	smarcad1a	87	61.392	ENSTSYG00000002706	SMARCAD1	68	63.558	Carlito_syrichta
ENSSDUG00000022338	smarcad1a	82	55.572	ENSCAPG00000016744	SMARCAD1	74	57.185	Cavia_aperea
ENSSDUG00000022338	smarcad1a	84	62.185	ENSCPOG00000011398	SMARCAD1	67	63.415	Cavia_porcellus
ENSSDUG00000022338	smarcad1a	84	62.465	ENSCCAG00000022264	SMARCAD1	99	67.508	Cebus_capucinus
ENSSDUG00000022338	smarcad1a	84	62.325	ENSCATG00000035663	SMARCAD1	78	63.558	Cercocebus_atys
ENSSDUG00000022338	smarcad1a	84	62.325	ENSCSAG00000004186	SMARCAD1	83	63.558	Chlorocebus_sabaeus
ENSSDUG00000022338	smarcad1a	88	61.044	ENSCPBG00000013203	SMARCAD1	66	63.793	Chrysemys_picta_bellii
ENSSDUG00000022338	smarcad1a	78	49.547	ENSCING00000001688	-	99	49.256	Ciona_intestinalis
ENSSDUG00000022338	smarcad1a	84	62.185	ENSCANG00000003556	SMARCAD1	99	67.340	Colobus_angolensis_palliatus
ENSSDUG00000022338	smarcad1a	76	65.991	ENSCGRG00001015056	Smarcad1	63	65.991	Cricetulus_griseus_chok1gshd
ENSSDUG00000022338	smarcad1a	76	65.991	ENSCGRG00000014087	Smarcad1	63	65.991	Cricetulus_griseus_crigri
ENSSDUG00000022338	smarcad1a	99	77.365	ENSCSEG00000017903	smarcad1a	76	79.328	Cynoglossus_semilaevis
ENSSDUG00000022338	smarcad1a	99	76.822	ENSCSEG00000014419	-	82	75.563	Cynoglossus_semilaevis
ENSSDUG00000022338	smarcad1a	88	68.826	ENSDARG00000014041	smarcad1a	71	71.614	Danio_rerio
ENSSDUG00000022338	smarcad1a	76	76.406	ENSDARG00000073721	smarcad1b	73	72.740	Danio_rerio
ENSSDUG00000022338	smarcad1a	83	62.784	ENSDNOG00000000806	-	68	62.784	Dasypus_novemcinctus
ENSSDUG00000022338	smarcad1a	89	58.831	ENSDORG00000012331	Smarcad1	68	62.500	Dipodomys_ordii
ENSSDUG00000022338	smarcad1a	76	44.632	FBgn0032157	Etl1	80	43.612	Drosophila_melanogaster
ENSSDUG00000022338	smarcad1a	75	47.270	ENSEBUG00000003969	smarcad1a	97	47.528	Eptatretus_burgeri
ENSSDUG00000022338	smarcad1a	84	62.343	ENSEASG00005012382	SMARCAD1	78	60.993	Equus_asinus_asinus
ENSSDUG00000022338	smarcad1a	84	62.343	ENSECAG00000011562	SMARCAD1	68	62.784	Equus_caballus
ENSSDUG00000022338	smarcad1a	89	76.463	ENSELUG00000018535	smarcad1a	69	80.429	Esox_lucius
ENSSDUG00000022338	smarcad1a	84	67.893	ENSELUG00000019154	smarcad1b	70	69.635	Esox_lucius
ENSSDUG00000022338	smarcad1a	83	62.926	ENSFCAG00000003958	SMARCAD1	99	67.340	Felis_catus
ENSSDUG00000022338	smarcad1a	80	65.051	ENSFALG00000006089	SMARCAD1	66	65.051	Ficedula_albicollis
ENSSDUG00000022338	smarcad1a	84	62.325	ENSFDAG00000017027	SMARCAD1	68	63.558	Fukomys_damarensis
ENSSDUG00000022338	smarcad1a	99	73.653	ENSFHEG00000012778	smarcad1a	71	78.222	Fundulus_heteroclitus
ENSSDUG00000022338	smarcad1a	85	79.805	ENSGMOG00000018995	smarcad1a	82	81.392	Gadus_morhua
ENSSDUG00000022338	smarcad1a	84	60.828	ENSGALG00000037339	SMARCAD1	84	62.644	Gallus_gallus
ENSSDUG00000022338	smarcad1a	99	72.869	ENSGAFG00000013498	smarcad1a	71	74.121	Gambusia_affinis
ENSSDUG00000022338	smarcad1a	85	87.047	ENSGACG00000007327	smarcad1a	82	87.047	Gasterosteus_aculeatus
ENSSDUG00000022338	smarcad1a	88	61.044	ENSGAGG00000008582	SMARCAD1	67	63.793	Gopherus_agassizii
ENSSDUG00000022338	smarcad1a	84	62.325	ENSGGOG00000023001	SMARCAD1	68	63.558	Gorilla_gorilla
ENSSDUG00000022338	smarcad1a	99	82.656	ENSHBUG00000011042	smarcad1a	78	83.112	Haplochromis_burtoni
ENSSDUG00000022338	smarcad1a	84	62.325	ENSHGLG00000005070	SMARCAD1	67	63.558	Heterocephalus_glaber_female
ENSSDUG00000022338	smarcad1a	84	62.325	ENSHGLG00100006812	SMARCAD1	67	63.558	Heterocephalus_glaber_male
ENSSDUG00000022338	smarcad1a	99	70.251	ENSHCOG00000007848	smarcad1a	69	74.836	Hippocampus_comes
ENSSDUG00000022338	smarcad1a	85	68.552	ENSIPUG00000000242	smarcad1a	70	71.346	Ictalurus_punctatus
ENSSDUG00000022338	smarcad1a	78	73.788	ENSIPUG00000022817	smarcad1b	74	71.802	Ictalurus_punctatus
ENSSDUG00000022338	smarcad1a	88	59.973	ENSSTOG00000001227	SMARCAD1	68	62.751	Ictidomys_tridecemlineatus
ENSSDUG00000022338	smarcad1a	84	61.785	ENSJJAG00000022342	Smarcad1	62	66.459	Jaculus_jaculus
ENSSDUG00000022338	smarcad1a	93	79.721	ENSKMAG00000021351	smarcad1a	77	78.398	Kryptolebias_marmoratus
ENSSDUG00000022338	smarcad1a	88	87.381	ENSLBEG00000008088	smarcad1a	75	83.396	Labrus_bergylta
ENSSDUG00000022338	smarcad1a	80	74.701	ENSLOCG00000012909	smarcad1a	71	72.650	Lepisosteus_oculatus
ENSSDUG00000022338	smarcad1a	84	60.644	ENSLAFG00000000040	SMARCAD1	68	61.693	Loxodonta_africana
ENSSDUG00000022338	smarcad1a	84	62.325	ENSMFAG00000042606	SMARCAD1	78	63.558	Macaca_fascicularis
ENSSDUG00000022338	smarcad1a	84	62.325	ENSMMUG00000022242	SMARCAD1	78	63.558	Macaca_mulatta
ENSSDUG00000022338	smarcad1a	84	62.325	ENSMNEG00000038117	SMARCAD1	99	67.340	Macaca_nemestrina
ENSSDUG00000022338	smarcad1a	84	62.325	ENSMLEG00000038333	SMARCAD1	99	67.340	Mandrillus_leucophaeus
ENSSDUG00000022338	smarcad1a	93	86.097	ENSMAMG00000000933	smarcad1a	77	82.614	Mastacembelus_armatus
ENSSDUG00000022338	smarcad1a	99	80.599	ENSMZEG00005005203	smarcad1a	77	81.039	Maylandia_zebra
ENSSDUG00000022338	smarcad1a	75	64.465	ENSMGAG00000005577	SMARCAD1	66	64.465	Meleagris_gallopavo
ENSSDUG00000022338	smarcad1a	86	60.494	ENSMAUG00000008417	Smarcad1	68	62.697	Mesocricetus_auratus
ENSSDUG00000022338	smarcad1a	86	61.392	ENSMICG00000009746	SMARCAD1	68	63.376	Microcebus_murinus
ENSSDUG00000022338	smarcad1a	87	60.082	ENSMOCG00000017142	Smarcad1	63	66.303	Microtus_ochrogaster
ENSSDUG00000022338	smarcad1a	84	88.210	ENSMMOG00000000275	smarcad1a	94	85.820	Mola_mola
ENSSDUG00000022338	smarcad1a	76	67.239	ENSMODG00000019268	SMARCAD1	66	65.192	Monodelphis_domestica
ENSSDUG00000022338	smarcad1a	82	62.841	MGP_CAROLIEiJ_G0028458	-	55	62.841	Mus_caroli
ENSSDUG00000022338	smarcad1a	82	62.841	ENSMUSG00000029920	Smarcad1	68	62.841	Mus_musculus
ENSSDUG00000022338	smarcad1a	82	62.841	MGP_PahariEiJ_G0022198	Smarcad1	68	62.841	Mus_pahari
ENSSDUG00000022338	smarcad1a	82	62.841	MGP_SPRETEiJ_G0029462	Smarcad1	68	62.841	Mus_spretus
ENSSDUG00000022338	smarcad1a	84	62.256	ENSMPUG00000002111	SMARCAD1	68	62.784	Mustela_putorius_furo
ENSSDUG00000022338	smarcad1a	84	61.304	ENSMLUG00000000425	SMARCAD1	67	62.931	Myotis_lucifugus
ENSSDUG00000022338	smarcad1a	86	60.573	ENSNGAG00000000810	Smarcad1	66	64.435	Nannospalax_galili
ENSSDUG00000022338	smarcad1a	99	81.753	ENSNBRG00000012749	smarcad1a	98	82.382	Neolamprologus_brichardi
ENSSDUG00000022338	smarcad1a	84	62.325	ENSNLEG00000014225	SMARCAD1	99	67.340	Nomascus_leucogenys
ENSSDUG00000022338	smarcad1a	84	61.625	ENSODEG00000004334	SMARCAD1	68	62.841	Octodon_degus
ENSSDUG00000022338	smarcad1a	76	88.924	ENSONIG00000015059	smarcad1a	72	84.081	Oreochromis_niloticus
ENSSDUG00000022338	smarcad1a	76	67.807	ENSOANG00000013764	SMARCAD1	83	64.419	Ornithorhynchus_anatinus
ENSSDUG00000022338	smarcad1a	84	62.045	ENSOCUG00000017283	SMARCAD1	68	63.271	Oryctolagus_cuniculus
ENSSDUG00000022338	smarcad1a	92	78.295	ENSORLG00000004869	smarcad1a	73	78.599	Oryzias_latipes
ENSSDUG00000022338	smarcad1a	92	79.070	ENSORLG00020020569	smarcad1a	73	78.599	Oryzias_latipes_hni
ENSSDUG00000022338	smarcad1a	92	78.553	ENSORLG00015009045	smarcad1a	73	78.599	Oryzias_latipes_hsok
ENSSDUG00000022338	smarcad1a	99	74.286	ENSOMEG00000023032	smarcad1a	69	82.591	Oryzias_melastigma
ENSSDUG00000022338	smarcad1a	84	61.732	ENSOGAG00000011444	SMARCAD1	68	62.947	Otolemur_garnettii
ENSSDUG00000022338	smarcad1a	84	62.204	ENSOARG00000017851	SMARCAD1	68	62.642	Ovis_aries
ENSSDUG00000022338	smarcad1a	84	62.325	ENSPPAG00000035715	SMARCAD1	68	63.558	Pan_paniscus
ENSSDUG00000022338	smarcad1a	83	62.926	ENSPPRG00000024756	SMARCAD1	99	67.340	Panthera_pardus
ENSSDUG00000022338	smarcad1a	83	62.748	ENSPTIG00000017868	SMARCAD1	68	62.748	Panthera_tigris_altaica
ENSSDUG00000022338	smarcad1a	84	62.325	ENSPTRG00000023126	SMARCAD1	99	67.340	Pan_troglodytes
ENSSDUG00000022338	smarcad1a	84	60.809	ENSPANG00000019757	SMARCAD1	68	62.000	Papio_anubis
ENSSDUG00000022338	smarcad1a	88	61.446	ENSPSIG00000010255	SMARCAD1	66	64.224	Pelodiscus_sinensis
ENSSDUG00000022338	smarcad1a	76	78.106	ENSPMGG00000010735	smarcad1a	97	76.574	Periophthalmus_magnuspinnatus
ENSSDUG00000022338	smarcad1a	86	53.571	ENSPEMG00000001854	Smarcad1	68	54.741	Peromyscus_maniculatus_bairdii
ENSSDUG00000022338	smarcad1a	84	55.048	ENSPMAG00000003516	smarcad1a	70	55.556	Petromyzon_marinus
ENSSDUG00000022338	smarcad1a	80	65.782	ENSPCIG00000008137	SMARCAD1	92	64.140	Phascolarctos_cinereus
ENSSDUG00000022338	smarcad1a	98	76.699	ENSPFOG00000019116	smarcad1a	74	77.682	Poecilia_formosa
ENSSDUG00000022338	smarcad1a	98	76.578	ENSPLAG00000000108	smarcad1a	74	77.559	Poecilia_latipinna
ENSSDUG00000022338	smarcad1a	98	76.699	ENSPMEG00000009155	smarcad1a	74	77.682	Poecilia_mexicana
ENSSDUG00000022338	smarcad1a	98	76.792	ENSPREG00000018185	smarcad1a	82	77.312	Poecilia_reticulata
ENSSDUG00000022338	smarcad1a	84	61.872	ENSPPYG00000014935	SMARCAD1	68	63.090	Pongo_abelii
ENSSDUG00000022338	smarcad1a	87	52.732	ENSPCOG00000020478	SMARCAD1	78	54.232	Propithecus_coquereli
ENSSDUG00000022338	smarcad1a	84	61.872	ENSPVAG00000001760	SMARCAD1	66	63.411	Pteropus_vampyrus
ENSSDUG00000022338	smarcad1a	99	81.633	ENSPNYG00000010087	smarcad1a	98	80.241	Pundamilia_nyererei
ENSSDUG00000022338	smarcad1a	90	68.824	ENSPNAG00000001663	smarcad1a	71	72.063	Pygocentrus_nattereri
ENSSDUG00000022338	smarcad1a	82	71.866	ENSPNAG00000010099	smarcad1b	73	72.635	Pygocentrus_nattereri
ENSSDUG00000022338	smarcad1a	84	62.079	ENSRNOG00000006391	Smarcad1	68	62.984	Rattus_norvegicus
ENSSDUG00000022338	smarcad1a	84	62.325	ENSRBIG00000041989	SMARCAD1	68	63.558	Rhinopithecus_bieti
ENSSDUG00000022338	smarcad1a	84	62.325	ENSRROG00000035309	SMARCAD1	68	63.558	Rhinopithecus_roxellana
ENSSDUG00000022338	smarcad1a	84	62.465	ENSSBOG00000032114	SMARCAD1	99	67.508	Saimiri_boliviensis_boliviensis
ENSSDUG00000022338	smarcad1a	76	67.551	ENSSHAG00000001279	SMARCAD1	62	67.551	Sarcophilus_harrisii
ENSSDUG00000022338	smarcad1a	82	74.928	ENSSFOG00015016814	smarcad1b	68	74.928	Scleropages_formosus
ENSSDUG00000022338	smarcad1a	82	73.082	ENSSFOG00015020909	smarcad1a	91	73.082	Scleropages_formosus
ENSSDUG00000022338	smarcad1a	98	86.007	ENSSMAG00000001326	smarcad1a	78	85.372	Scophthalmus_maximus
ENSSDUG00000022338	smarcad1a	98	97.805	ENSSLDG00000024986	smarcad1a	77	97.805	Seriola_lalandi_dorsalis
ENSSDUG00000022338	smarcad1a	70	68.571	ENSSPUG00000004633	SMARCAD1	99	68.571	Sphenodon_punctatus
ENSSDUG00000022338	smarcad1a	99	84.468	ENSSPAG00000001970	smarcad1a	78	84.699	Stegastes_partitus
ENSSDUG00000022338	smarcad1a	84	62.343	ENSSSCG00000009193	SMARCAD1	83	62.784	Sus_scrofa
ENSSDUG00000022338	smarcad1a	83	63.559	ENSTGUG00000003127	SMARCAD1	90	63.701	Taeniopygia_guttata
ENSSDUG00000022338	smarcad1a	87	83.654	ENSTNIG00000017585	smarcad1a	80	86.182	Tetraodon_nigroviridis
ENSSDUG00000022338	smarcad1a	71	69.048	ENSTBEG00000002789	SMARCAD1	58	69.048	Tupaia_belangeri
ENSSDUG00000022338	smarcad1a	84	61.699	ENSTTRG00000000226	SMARCAD1	68	63.517	Tursiops_truncatus
ENSSDUG00000022338	smarcad1a	84	62.256	ENSUAMG00000022262	SMARCAD1	73	63.066	Ursus_americanus
ENSSDUG00000022338	smarcad1a	84	62.256	ENSUMAG00000004549	SMARCAD1	68	62.784	Ursus_maritimus
ENSSDUG00000022338	smarcad1a	84	62.396	ENSVVUG00000007271	SMARCAD1	83	62.784	Vulpes_vulpes
ENSSDUG00000022338	smarcad1a	82	60.058	ENSXETG00000019214	smarcad1	78	59.971	Xenopus_tropicalis
ENSSDUG00000022338	smarcad1a	82	82.438	ENSXCOG00000005232	smarcad1a	82	83.283	Xiphophorus_couchianus
ENSSDUG00000022338	smarcad1a	99	75.692	ENSXMAG00000015350	smarcad1a	74	76.695	Xiphophorus_maculatus