EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000022349 (Gene tree)
Gene ID: 111233103
Gene Symbol: nop16
Alias: zgc:92910
Full Name: NOP16 nucleolar protein
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 32875 bases
Position: chrBDQW01000367.1:1616669-1649543
Accession: 111233103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000031072	Nop16	PF09420.10	6.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000031604	-	1058	-	ENSSDUP00000031068	203 (aa)	-	-
ENSSDUT00000031608	-	1849	XM_022760866	ENSSDUP00000031072	177 (aa)	XP_022616587	UPI000BBE5A85
ENSSDUT00000031601	-	1053	-	ENSSDUP00000031065	180 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000022349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022349's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022349	nop16	99	78.286	ENSAPOG00000010682	-	99	78.286	Acanthochromis_polyacanthus
ENSSDUG00000022349	nop16	95	54.118	ENSAMEG00000006988	-	96	54.118	Ailuropoda_melanoleuca
ENSSDUG00000022349	nop16	100	75.141	ENSACIG00000019263	nop16	100	75.141	Amphilophus_citrinellus
ENSSDUG00000022349	nop16	99	79.429	ENSAOCG00000005504	nop16	99	79.429	Amphiprion_ocellaris
ENSSDUG00000022349	nop16	99	79.429	ENSAPEG00000006605	nop16	99	79.429	Amphiprion_percula
ENSSDUG00000022349	nop16	100	83.616	ENSATEG00000014089	nop16	100	83.616	Anabas_testudineus
ENSSDUG00000022349	nop16	95	57.558	ENSACAG00000006333	-	96	57.558	Anolis_carolinensis
ENSSDUG00000022349	nop16	95	47.059	ENSANAG00000027410	-	95	47.059	Aotus_nancymaae
ENSSDUG00000022349	nop16	95	51.765	ENSANAG00000015743	-	95	51.765	Aotus_nancymaae
ENSSDUG00000022349	nop16	100	74.011	ENSACLG00000025227	nop16	100	74.576	Astatotilapia_calliptera
ENSSDUG00000022349	nop16	94	55.882	ENSAMXG00000006843	nop16	95	55.882	Astyanax_mexicanus
ENSSDUG00000022349	nop16	95	54.706	ENSBTAG00000010734	NOP16	96	54.706	Bos_taurus
ENSSDUG00000022349	nop16	66	33.813	WBGene00013958	ZK265.6	74	33.813	Caenorhabditis_elegans
ENSSDUG00000022349	nop16	95	52.941	ENSCAFG00000016694	NOP16	96	52.941	Canis_familiaris
ENSSDUG00000022349	nop16	95	52.941	ENSCAFG00020011505	-	90	52.941	Canis_lupus_dingo
ENSSDUG00000022349	nop16	95	54.706	ENSCHIG00000022082	-	96	54.706	Capra_hircus
ENSSDUG00000022349	nop16	95	46.471	ENSTSYG00000032690	-	95	46.471	Carlito_syrichta
ENSSDUG00000022349	nop16	95	52.941	ENSTSYG00000030409	-	96	52.941	Carlito_syrichta
ENSSDUG00000022349	nop16	95	53.529	ENSCPOG00000026072	-	96	53.529	Cavia_porcellus
ENSSDUG00000022349	nop16	88	52.229	ENSCCAG00000026775	-	91	52.229	Cebus_capucinus
ENSSDUG00000022349	nop16	95	52.353	ENSCLAG00000015405	-	96	52.353	Chinchilla_lanigera
ENSSDUG00000022349	nop16	95	54.118	ENSCSAG00000009400	-	96	54.118	Chlorocebus_sabaeus
ENSSDUG00000022349	nop16	95	53.977	ENSCPBG00000022647	-	96	53.977	Chrysemys_picta_bellii
ENSSDUG00000022349	nop16	95	37.714	ENSCING00000006179	-	73	40.580	Ciona_intestinalis
ENSSDUG00000022349	nop16	72	41.860	ENSCSAVG00000000269	-	75	41.176	Ciona_savignyi
ENSSDUG00000022349	nop16	95	53.529	ENSCGRG00001004259	Nop16	96	53.529	Cricetulus_griseus_chok1gshd
ENSSDUG00000022349	nop16	95	53.529	ENSCGRG00000010975	Nop16	96	53.529	Cricetulus_griseus_crigri
ENSSDUG00000022349	nop16	97	67.836	ENSCSEG00000020523	nop16	98	67.836	Cynoglossus_semilaevis
ENSSDUG00000022349	nop16	100	79.661	ENSCVAG00000020140	nop16	100	79.661	Cyprinodon_variegatus
ENSSDUG00000022349	nop16	95	55.621	ENSDARG00000044402	nop16	96	55.621	Danio_rerio
ENSSDUG00000022349	nop16	95	53.254	ENSDNOG00000042890	-	95	53.254	Dasypus_novemcinctus
ENSSDUG00000022349	nop16	97	54.598	ENSDORG00000008872	Nop16	96	54.706	Dipodomys_ordii
ENSSDUG00000022349	nop16	93	41.618	ENSEBUG00000011196	nop16	91	43.529	Eptatretus_burgeri
ENSSDUG00000022349	nop16	95	54.118	ENSEASG00005011988	-	96	54.118	Equus_asinus_asinus
ENSSDUG00000022349	nop16	95	54.706	ENSECAG00000021354	NOP16	96	54.706	Equus_caballus
ENSSDUG00000022349	nop16	95	64.912	ENSELUG00000000401	nop16	95	64.912	Esox_lucius
ENSSDUG00000022349	nop16	95	55.294	ENSFCAG00000025473	-	96	55.294	Felis_catus
ENSSDUG00000022349	nop16	95	52.632	ENSFALG00000008553	-	99	51.685	Ficedula_albicollis
ENSSDUG00000022349	nop16	95	51.765	ENSFDAG00000000193	-	96	51.765	Fukomys_damarensis
ENSSDUG00000022349	nop16	100	77.966	ENSFHEG00000016452	nop16	100	77.966	Fundulus_heteroclitus
ENSSDUG00000022349	nop16	95	54.070	ENSGALG00000003355	-	96	54.070	Gallus_gallus
ENSSDUG00000022349	nop16	89	73.248	ENSGAFG00000011616	nop16	80	77.241	Gambusia_affinis
ENSSDUG00000022349	nop16	97	73.256	ENSGACG00000020819	-	100	73.256	Gasterosteus_aculeatus
ENSSDUG00000022349	nop16	95	65.680	ENSGACG00000020810	nop16	100	65.680	Gasterosteus_aculeatus
ENSSDUG00000022349	nop16	97	71.429	ENSGACG00000003122	-	100	76.923	Gasterosteus_aculeatus
ENSSDUG00000022349	nop16	97	75.581	ENSGACG00000002618	-	100	75.581	Gasterosteus_aculeatus
ENSSDUG00000022349	nop16	100	74.011	ENSHBUG00000013527	nop16	100	74.576	Haplochromis_burtoni
ENSSDUG00000022349	nop16	99	51.977	ENSHGLG00000013437	NOP16	97	51.977	Heterocephalus_glaber_female
ENSSDUG00000022349	nop16	99	51.977	ENSHGLG00100011375	NOP16	97	51.977	Heterocephalus_glaber_male
ENSSDUG00000022349	nop16	97	68.605	ENSHCOG00000019999	nop16	98	68.605	Hippocampus_comes
ENSSDUG00000022349	nop16	93	61.212	ENSIPUG00000006682	nop16	94	61.212	Ictalurus_punctatus
ENSSDUG00000022349	nop16	95	54.651	ENSSTOG00000004869	-	96	54.651	Ictidomys_tridecemlineatus
ENSSDUG00000022349	nop16	95	54.118	ENSJJAG00000017655	Nop16	96	54.118	Jaculus_jaculus
ENSSDUG00000022349	nop16	100	73.446	ENSKMAG00000006164	nop16	100	73.446	Kryptolebias_marmoratus
ENSSDUG00000022349	nop16	100	82.486	ENSLBEG00000018355	nop16	82	82.486	Labrus_bergylta
ENSSDUG00000022349	nop16	95	60.588	ENSLACG00000014884	nop16	96	60.588	Latimeria_chalumnae
ENSSDUG00000022349	nop16	96	62.573	ENSLOCG00000012348	nop16	95	62.573	Lepisosteus_oculatus
ENSSDUG00000022349	nop16	95	53.254	ENSLAFG00000017886	-	95	53.254	Loxodonta_africana
ENSSDUG00000022349	nop16	99	77.273	ENSMAMG00000021868	nop16	99	77.273	Mastacembelus_armatus
ENSSDUG00000022349	nop16	100	74.011	ENSMZEG00005012112	nop16	100	74.576	Maylandia_zebra
ENSSDUG00000022349	nop16	89	52.201	ENSMAUG00000015569	-	94	52.201	Mesocricetus_auratus
ENSSDUG00000022349	nop16	95	54.706	ENSMOCG00000020788	Nop16	96	54.706	Microtus_ochrogaster
ENSSDUG00000022349	nop16	96	78.235	ENSMMOG00000016054	nop16	99	78.235	Mola_mola
ENSSDUG00000022349	nop16	95	57.310	ENSMODG00000005214	-	96	57.310	Monodelphis_domestica
ENSSDUG00000022349	nop16	100	79.661	ENSMALG00000021263	nop16	100	79.661	Monopterus_albus
ENSSDUG00000022349	nop16	95	53.529	MGP_CAROLIEiJ_G0018538	Nop16	96	53.529	Mus_caroli
ENSSDUG00000022349	nop16	95	54.118	ENSMUSG00000025869	Nop16	96	54.118	Mus_musculus
ENSSDUG00000022349	nop16	95	54.706	MGP_PahariEiJ_G0019603	Nop16	96	54.706	Mus_pahari
ENSSDUG00000022349	nop16	95	54.118	MGP_SPRETEiJ_G0019418	Nop16	96	54.118	Mus_spretus
ENSSDUG00000022349	nop16	95	54.118	ENSMPUG00000012552	-	96	54.118	Mustela_putorius_furo
ENSSDUG00000022349	nop16	95	52.941	ENSMPUG00000016964	-	95	52.941	Mustela_putorius_furo
ENSSDUG00000022349	nop16	95	52.663	ENSMLUG00000003504	-	95	52.663	Myotis_lucifugus
ENSSDUG00000022349	nop16	95	54.118	ENSNGAG00000018045	Nop16	96	54.118	Nannospalax_galili
ENSSDUG00000022349	nop16	97	73.256	ENSNBRG00000015181	nop16	98	73.837	Neolamprologus_brichardi
ENSSDUG00000022349	nop16	95	52.353	ENSODEG00000009586	-	96	52.353	Octodon_degus
ENSSDUG00000022349	nop16	100	75.706	ENSONIG00000016417	nop16	100	75.706	Oreochromis_niloticus
ENSSDUG00000022349	nop16	95	55.294	ENSOCUG00000013171	-	96	55.294	Oryctolagus_cuniculus
ENSSDUG00000022349	nop16	100	68.715	ENSORLG00000026611	nop16	100	68.715	Oryzias_latipes
ENSSDUG00000022349	nop16	99	70.286	ENSOMEG00000023001	nop16	99	70.286	Oryzias_melastigma
ENSSDUG00000022349	nop16	95	55.882	ENSOGAG00000000824	-	96	55.882	Otolemur_garnettii
ENSSDUG00000022349	nop16	95	54.706	ENSOARG00000002165	-	96	54.706	Ovis_aries
ENSSDUG00000022349	nop16	95	53.529	ENSPPAG00000035473	-	96	53.529	Pan_paniscus
ENSSDUG00000022349	nop16	95	55.294	ENSPPRG00000016600	-	96	55.294	Panthera_pardus
ENSSDUG00000022349	nop16	95	55.294	ENSPTIG00000011708	-	96	55.294	Panthera_tigris_altaica
ENSSDUG00000022349	nop16	95	53.529	ENSPTRG00000017560	NOP16	96	53.529	Pan_troglodytes
ENSSDUG00000022349	nop16	98	57.803	ENSPKIG00000009587	nop16	98	57.803	Paramormyrops_kingsleyae
ENSSDUG00000022349	nop16	79	58.741	ENSPSIG00000013546	-	99	58.741	Pelodiscus_sinensis
ENSSDUG00000022349	nop16	95	76.023	ENSPMGG00000003443	nop16	99	77.193	Periophthalmus_magnuspinnatus
ENSSDUG00000022349	nop16	95	54.118	ENSPEMG00000020268	Nop16	96	54.118	Peromyscus_maniculatus_bairdii
ENSSDUG00000022349	nop16	95	54.971	ENSPCIG00000009782	-	96	54.971	Phascolarctos_cinereus
ENSSDUG00000022349	nop16	100	76.836	ENSPFOG00000010549	nop16	100	76.836	Poecilia_formosa
ENSSDUG00000022349	nop16	81	75.000	ENSPLAG00000007124	nop16	74	75.000	Poecilia_latipinna
ENSSDUG00000022349	nop16	100	77.401	ENSPMEG00000008611	nop16	100	77.401	Poecilia_mexicana
ENSSDUG00000022349	nop16	100	77.401	ENSPREG00000012940	nop16	100	77.401	Poecilia_reticulata
ENSSDUG00000022349	nop16	95	53.529	ENSPPYG00000016070	-	96	53.529	Pongo_abelii
ENSSDUG00000022349	nop16	100	74.576	ENSPNYG00000013529	nop16	100	75.141	Pundamilia_nyererei
ENSSDUG00000022349	nop16	93	55.758	ENSPNAG00000016233	nop16	95	55.758	Pygocentrus_nattereri
ENSSDUG00000022349	nop16	95	52.941	ENSRNOG00000017284	Nop16	96	52.941	Rattus_norvegicus
ENSSDUG00000022349	nop16	95	55.882	ENSSHAG00000001724	-	96	55.882	Sarcophilus_harrisii
ENSSDUG00000022349	nop16	89	59.006	ENSSFOG00015010537	nop16	77	59.538	Scleropages_formosus
ENSSDUG00000022349	nop16	100	98.870	ENSSLDG00000025171	nop16	100	98.870	Seriola_lalandi_dorsalis
ENSSDUG00000022349	nop16	73	42.748	ENSSARG00000006699	-	61	42.748	Sorex_araneus
ENSSDUG00000022349	nop16	95	57.895	ENSSPUG00000006508	-	95	57.895	Sphenodon_punctatus
ENSSDUG00000022349	nop16	100	77.401	ENSSPAG00000011772	nop16	100	77.401	Stegastes_partitus
ENSSDUG00000022349	nop16	95	54.118	ENSSSCG00000029577	-	96	54.118	Sus_scrofa
ENSSDUG00000022349	nop16	95	52.907	ENSTGUG00000000543	-	99	51.955	Taeniopygia_guttata
ENSSDUG00000022349	nop16	99	66.477	ENSTRUG00000020255	nop16	99	66.477	Takifugu_rubripes
ENSSDUG00000022349	nop16	98	71.839	ENSTNIG00000007616	nop16	98	71.839	Tetraodon_nigroviridis
ENSSDUG00000022349	nop16	95	54.706	ENSUAMG00000005139	-	96	54.706	Ursus_americanus
ENSSDUG00000022349	nop16	95	52.941	ENSVVUG00000001697	-	90	52.941	Vulpes_vulpes
ENSSDUG00000022349	nop16	88	53.205	ENSXETG00000022342	nop16	91	53.205	Xenopus_tropicalis
ENSSDUG00000022349	nop16	97	76.608	ENSXCOG00000018829	nop16	98	76.608	Xiphophorus_couchianus
ENSSDUG00000022349	nop16	100	77.401	ENSXMAG00000029113	nop16	100	77.401	Xiphophorus_maculatus