EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000022406 (Gene tree)
Gene ID: 111221851
Gene Symbol: -
Alias: -
Full Name: zinc finger matrin-type protein 1-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 7444 bases
Position: chrBDQW01000088.1:10079381-10086824
Accession: 111221851
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000031157	zf-met	PF12874.7	2.1e-23	1	4
ENSSDUP00000031157	zf-met	PF12874.7	2.1e-23	2	4
ENSSDUP00000031157	zf-met	PF12874.7	2.1e-23	3	4
ENSSDUP00000031157	zf-met	PF12874.7	2.1e-23	4	4
ENSSDUP00000031157	zf-C2H2_jaz	PF12171.8	6.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000031692	-	2466	XM_022745435	ENSSDUP00000031157	610 (aa)	XP_022601156	-

Gene Model

Click here to download ENSSDUG00000022406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022406's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022406	-	89	65.751	ENSAPOG00000002875	-	100	67.216	Acanthochromis_polyacanthus
ENSSDUG00000022406	-	100	71.220	ENSAOCG00000007093	-	100	70.081	Amphiprion_ocellaris
ENSSDUG00000022406	-	100	69.156	ENSATEG00000023589	-	100	63.259	Anabas_testudineus
ENSSDUG00000022406	-	100	64.715	ENSACLG00000012751	-	100	61.626	Astatotilapia_calliptera
ENSSDUG00000022406	-	87	45.018	ENSCVAG00000018034	-	66	50.000	Cyprinodon_variegatus
ENSSDUG00000022406	-	91	44.637	ENSELUG00000010589	-	62	50.781	Esox_lucius
ENSSDUG00000022406	-	50	47.078	ENSGMOG00000008972	-	54	54.206	Gadus_morhua
ENSSDUG00000022406	-	81	58.483	ENSGACG00000009018	-	100	58.835	Gasterosteus_aculeatus
ENSSDUG00000022406	-	100	62.276	ENSHBUG00000020963	-	100	63.740	Haplochromis_burtoni
ENSSDUG00000022406	-	85	45.279	ENSHCOG00000013075	-	100	44.123	Hippocampus_comes
ENSSDUG00000022406	-	99	41.997	ENSIPUG00000011933	-	54	53.231	Ictalurus_punctatus
ENSSDUG00000022406	-	100	66.987	ENSLBEG00000027221	-	99	66.667	Labrus_bergylta
ENSSDUG00000022406	-	100	64.553	ENSMZEG00005026847	-	100	61.626	Maylandia_zebra
ENSSDUG00000022406	-	86	61.887	ENSMMOG00000012396	-	95	62.239	Mola_mola
ENSSDUG00000022406	-	83	71.456	ENSMALG00000002560	-	100	70.229	Monopterus_albus
ENSSDUG00000022406	-	87	68.715	ENSSMAG00000009994	-	98	68.392	Scophthalmus_maximus
ENSSDUG00000022406	-	83	68.738	ENSSPAG00000018876	-	100	68.738	Stegastes_partitus