EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000022410 (Gene tree)
Gene ID: -
Gene Symbol: gfi1ab
Alias: gfi1|gfi1.2|gfi1b
Full Name: growth factor independent 1A transcription repressor b
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 22870 bases
Position: chrBDQW01000321.1:1606182-1629051
Accession: ZDB-GENE-040116-8
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000031155	zf-C2H2	PF00096.26	9.2e-30	1	6
ENSSDUP00000031155	zf-C2H2	PF00096.26	9.2e-30	2	6
ENSSDUP00000031155	zf-C2H2	PF00096.26	9.2e-30	3	6
ENSSDUP00000031155	zf-C2H2	PF00096.26	9.2e-30	4	6
ENSSDUP00000031155	zf-C2H2	PF00096.26	9.2e-30	5	6
ENSSDUP00000031155	zf-C2H2	PF00096.26	9.2e-30	6	6
ENSSDUP00000031155	zf-met	PF12874.7	6.9e-08	1	2
ENSSDUP00000031155	zf-met	PF12874.7	6.9e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000031691	-	1128	-	ENSSDUP00000031155	375 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000022410's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022410's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000022410	gfi1ab	52	38.994	ENSSDUG00000016450	-	53	38.182
ENSSDUG00000022410	gfi1ab	50	43.972	ENSSDUG00000004835	-	75	42.857
ENSSDUG00000022410	gfi1ab	100	50.781	ENSSDUG00000011604	gfi1b	100	50.521
ENSSDUG00000022410	gfi1ab	56	46.584	ENSSDUG00000009601	-	99	46.053
ENSSDUG00000022410	gfi1ab	50	49.123	ENSSDUG00000007336	-	89	49.123
ENSSDUG00000022410	gfi1ab	50	46.296	ENSSDUG00000005401	-	87	43.750
ENSSDUG00000022410	gfi1ab	50	46.250	ENSSDUG00000006426	-	95	42.500
ENSSDUG00000022410	gfi1ab	54	43.976	ENSSDUG00000009534	-	68	43.976
ENSSDUG00000022410	gfi1ab	100	61.538	ENSSDUG00000011654	gfi1aa	100	61.538
ENSSDUG00000022410	gfi1ab	52	47.170	ENSSDUG00000020810	-	71	47.170
ENSSDUG00000022410	gfi1ab	50	44.048	ENSSDUG00000015182	-	67	44.048
ENSSDUG00000022410	gfi1ab	50	42.276	ENSSDUG00000015622	-	76	42.623
ENSSDUG00000022410	gfi1ab	63	44.086	ENSSDUG00000011170	znf236	51	44.086
ENSSDUG00000022410	gfi1ab	50	45.570	ENSSDUG00000020788	-	65	45.570
ENSSDUG00000022410	gfi1ab	99	36.111	ENSSDUG00000001637	scrt2	94	36.111
ENSSDUG00000022410	gfi1ab	50	44.737	ENSSDUG00000008943	-	85	45.000
ENSSDUG00000022410	gfi1ab	70	41.045	ENSSDUG00000000695	-	74	41.045
ENSSDUG00000022410	gfi1ab	52	37.500	ENSSDUG00000000946	-	97	56.897
ENSSDUG00000022410	gfi1ab	50	40.816	ENSSDUG00000002488	-	60	40.816
ENSSDUG00000022410	gfi1ab	52	45.000	ENSSDUG00000009439	-	94	45.000
ENSSDUG00000022410	gfi1ab	52	39.394	ENSSDUG00000013904	-	65	39.394
ENSSDUG00000022410	gfi1ab	53	40.909	ENSSDUG00000002675	znf646	59	40.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022410	gfi1ab	100	62.118	ENSG00000162676	GFI1	100	62.676	Homo_sapiens
ENSSDUG00000022410	gfi1ab	100	84.949	ENSAPOG00000015189	gfi1ab	100	84.694	Acanthochromis_polyacanthus
ENSSDUG00000022410	gfi1ab	50	90.526	ENSAMEG00000013858	-	99	90.526	Ailuropoda_melanoleuca
ENSSDUG00000022410	gfi1ab	100	85.263	ENSACIG00000016354	gfi1ab	100	85.000	Amphilophus_citrinellus
ENSSDUG00000022410	gfi1ab	100	76.562	ENSAOCG00000008339	gfi1ab	100	74.740	Amphiprion_ocellaris
ENSSDUG00000022410	gfi1ab	100	84.694	ENSAPEG00000023870	gfi1ab	100	84.439	Amphiprion_percula
ENSSDUG00000022410	gfi1ab	100	82.857	ENSATEG00000009167	gfi1ab	89	82.597	Anabas_testudineus
ENSSDUG00000022410	gfi1ab	88	64.756	ENSAPLG00000015700	GFI1	99	64.756	Anas_platyrhynchos
ENSSDUG00000022410	gfi1ab	100	64.109	ENSACAG00000004498	GFI1	100	64.356	Anolis_carolinensis
ENSSDUG00000022410	gfi1ab	100	63.208	ENSANAG00000019656	GFI1	100	63.208	Aotus_nancymaae
ENSSDUG00000022410	gfi1ab	100	85.530	ENSACLG00000026458	gfi1ab	93	85.271	Astatotilapia_calliptera
ENSSDUG00000022410	gfi1ab	100	53.906	ENSAMXG00000006669	GFI1	100	54.167	Astyanax_mexicanus
ENSSDUG00000022410	gfi1ab	100	63.797	ENSAMXG00000039600	gfi1ab	100	63.544	Astyanax_mexicanus
ENSSDUG00000022410	gfi1ab	61	52.632	ENSAMXG00000015228	-	72	52.632	Astyanax_mexicanus
ENSSDUG00000022410	gfi1ab	100	62.411	ENSBTAG00000016723	GFI1	100	62.411	Bos_taurus
ENSSDUG00000022410	gfi1ab	100	62.441	ENSCJAG00000017609	GFI1	100	62.441	Callithrix_jacchus
ENSSDUG00000022410	gfi1ab	100	62.353	ENSCAFG00000020155	GFI1	100	62.353	Canis_familiaris
ENSSDUG00000022410	gfi1ab	100	62.353	ENSCAFG00020013371	GFI1	88	62.353	Canis_lupus_dingo
ENSSDUG00000022410	gfi1ab	100	62.411	ENSCHIG00000016135	GFI1	100	62.411	Capra_hircus
ENSSDUG00000022410	gfi1ab	100	61.137	ENSCPOG00000011727	GFI1	100	61.995	Cavia_porcellus
ENSSDUG00000022410	gfi1ab	100	61.882	ENSCCAG00000036072	GFI1	100	62.118	Cebus_capucinus
ENSSDUG00000022410	gfi1ab	100	62.118	ENSCATG00000037873	GFI1	100	62.676	Cercocebus_atys
ENSSDUG00000022410	gfi1ab	100	65.903	ENSCLAG00000005915	GFI1	100	59.540	Chinchilla_lanigera
ENSSDUG00000022410	gfi1ab	97	56.831	ENSCSAG00000001469	GFI1	99	57.493	Chlorocebus_sabaeus
ENSSDUG00000022410	gfi1ab	100	62.353	ENSCANG00000034077	GFI1	100	62.911	Colobus_angolensis_palliatus
ENSSDUG00000022410	gfi1ab	100	60.190	ENSCGRG00001015432	Gfi1	100	61.085	Cricetulus_griseus_chok1gshd
ENSSDUG00000022410	gfi1ab	100	60.804	ENSCSEG00000017729	GFI1	100	60.804	Cynoglossus_semilaevis
ENSSDUG00000022410	gfi1ab	100	58.897	ENSCVAG00000004930	GFI1	100	60.902	Cyprinodon_variegatus
ENSSDUG00000022410	gfi1ab	100	79.070	ENSCVAG00000011828	gfi1ab	100	78.811	Cyprinodon_variegatus
ENSSDUG00000022410	gfi1ab	100	70.707	ENSDARG00000044457	gfi1ab	100	70.707	Danio_rerio
ENSSDUG00000022410	gfi1ab	100	61.737	ENSDNOG00000000782	GFI1	97	61.737	Dasypus_novemcinctus
ENSSDUG00000022410	gfi1ab	100	63.183	ENSEASG00005015509	GFI1	86	63.183	Equus_asinus_asinus
ENSSDUG00000022410	gfi1ab	85	58.011	ENSECAG00000006647	GFI1	86	58.011	Equus_caballus
ENSSDUG00000022410	gfi1ab	100	62.110	ENSEEUG00000000198	GFI1	100	62.110	Erinaceus_europaeus
ENSSDUG00000022410	gfi1ab	100	70.823	ENSELUG00000003015	gfi1ab	99	70.968	Esox_lucius
ENSSDUG00000022410	gfi1ab	100	61.290	ENSELUG00000019033	GFI1	100	61.290	Esox_lucius
ENSSDUG00000022410	gfi1ab	100	62.118	ENSFCAG00000005914	GFI1	100	62.118	Felis_catus
ENSSDUG00000022410	gfi1ab	100	79.434	ENSFHEG00000010997	gfi1ab	100	79.177	Fundulus_heteroclitus
ENSSDUG00000022410	gfi1ab	100	60.050	ENSFHEG00000000341	GFI1	100	61.538	Fundulus_heteroclitus
ENSSDUG00000022410	gfi1ab	100	73.454	ENSGMOG00000007737	gfi1ab	100	73.454	Gadus_morhua
ENSSDUG00000022410	gfi1ab	100	63.325	ENSGALG00000043650	GFI1	100	63.325	Gallus_gallus
ENSSDUG00000022410	gfi1ab	100	80.563	ENSGAFG00000016637	gfi1ab	100	80.307	Gambusia_affinis
ENSSDUG00000022410	gfi1ab	100	58.578	ENSGAFG00000018063	GFI1	100	59.658	Gambusia_affinis
ENSSDUG00000022410	gfi1ab	100	84.896	ENSGACG00000004257	gfi1ab	97	84.896	Gasterosteus_aculeatus
ENSSDUG00000022410	gfi1ab	100	62.118	ENSGGOG00000005320	GFI1	100	62.676	Gorilla_gorilla
ENSSDUG00000022410	gfi1ab	100	86.316	ENSHBUG00000011969	gfi1ab	100	86.053	Haplochromis_burtoni
ENSSDUG00000022410	gfi1ab	100	63.033	ENSHGLG00000008020	GFI1	100	63.183	Heterocephalus_glaber_female
ENSSDUG00000022410	gfi1ab	100	63.033	ENSHGLG00100000610	GFI1	100	63.183	Heterocephalus_glaber_male
ENSSDUG00000022410	gfi1ab	100	60.000	ENSHCOG00000019555	GFI1	100	60.000	Hippocampus_comes
ENSSDUG00000022410	gfi1ab	100	63.882	ENSHCOG00000008590	gfi1ab	100	63.210	Hippocampus_comes
ENSSDUG00000022410	gfi1ab	100	64.646	ENSIPUG00000010071	gfi1ab	87	64.646	Ictalurus_punctatus
ENSSDUG00000022410	gfi1ab	99	65.455	ENSIPUG00000021407	-	52	65.455	Ictalurus_punctatus
ENSSDUG00000022410	gfi1ab	100	60.202	ENSIPUG00000013414	GFI1	100	60.202	Ictalurus_punctatus
ENSSDUG00000022410	gfi1ab	100	60.849	ENSSTOG00000014583	GFI1	100	61.229	Ictidomys_tridecemlineatus
ENSSDUG00000022410	gfi1ab	100	80.311	ENSKMAG00000003810	gfi1ab	100	80.052	Kryptolebias_marmoratus
ENSSDUG00000022410	gfi1ab	100	85.641	ENSLBEG00000027776	gfi1ab	100	85.385	Labrus_bergylta
ENSSDUG00000022410	gfi1ab	100	66.334	ENSLACG00000013362	GFI1	98	66.334	Latimeria_chalumnae
ENSSDUG00000022410	gfi1ab	99	45.144	ENSLACG00000017590	-	99	45.195	Latimeria_chalumnae
ENSSDUG00000022410	gfi1ab	100	68.342	ENSLOCG00000004711	gfi1ab	100	68.342	Lepisosteus_oculatus
ENSSDUG00000022410	gfi1ab	100	61.779	ENSLAFG00000018346	GFI1	100	61.779	Loxodonta_africana
ENSSDUG00000022410	gfi1ab	100	62.118	ENSMFAG00000045801	GFI1	100	62.676	Macaca_fascicularis
ENSSDUG00000022410	gfi1ab	100	62.118	ENSMNEG00000036338	GFI1	100	62.676	Macaca_nemestrina
ENSSDUG00000022410	gfi1ab	100	62.118	ENSMLEG00000036181	GFI1	100	62.676	Mandrillus_leucophaeus
ENSSDUG00000022410	gfi1ab	100	85.455	ENSMAMG00000008125	gfi1ab	100	85.195	Mastacembelus_armatus
ENSSDUG00000022410	gfi1ab	100	85.271	ENSMZEG00005009895	gfi1ab	100	85.013	Maylandia_zebra
ENSSDUG00000022410	gfi1ab	88	65.517	ENSMGAG00000008187	GFI1	99	65.318	Meleagris_gallopavo
ENSSDUG00000022410	gfi1ab	100	61.647	ENSMICG00000047208	GFI1	100	61.647	Microcebus_murinus
ENSSDUG00000022410	gfi1ab	100	73.469	ENSMMOG00000005556	gfi1ab	100	73.214	Mola_mola
ENSSDUG00000022410	gfi1ab	100	61.021	ENSMODG00000011802	GFI1	100	62.207	Monodelphis_domestica
ENSSDUG00000022410	gfi1ab	100	85.676	ENSMALG00000014672	gfi1ab	100	85.411	Monopterus_albus
ENSSDUG00000022410	gfi1ab	100	60.000	MGP_CAROLIEiJ_G0027508	Gfi1	100	96.296	Mus_caroli
ENSSDUG00000022410	gfi1ab	100	61.882	ENSMUSG00000029275	Gfi1	100	61.882	Mus_musculus
ENSSDUG00000022410	gfi1ab	100	61.412	MGP_PahariEiJ_G0017280	Gfi1	100	96.296	Mus_pahari
ENSSDUG00000022410	gfi1ab	100	61.412	MGP_SPRETEiJ_G0028507	Gfi1	100	61.412	Mus_spretus
ENSSDUG00000022410	gfi1ab	100	64.975	ENSMPUG00000004178	GFI1	97	64.975	Mustela_putorius_furo
ENSSDUG00000022410	gfi1ab	100	60.664	ENSMLUG00000015191	GFI1	97	60.427	Myotis_lucifugus
ENSSDUG00000022410	gfi1ab	100	83.929	ENSNBRG00000015774	gfi1ab	100	83.673	Neolamprologus_brichardi
ENSSDUG00000022410	gfi1ab	88	64.054	ENSNLEG00000010470	GFI1	91	64.595	Nomascus_leucogenys
ENSSDUG00000022410	gfi1ab	100	63.059	ENSOPRG00000001473	GFI1	100	63.059	Ochotona_princeps
ENSSDUG00000022410	gfi1ab	100	85.530	ENSONIG00000019246	gfi1ab	100	85.271	Oreochromis_niloticus
ENSSDUG00000022410	gfi1ab	98	56.216	ENSOCUG00000023553	GFI1	93	56.604	Oryctolagus_cuniculus
ENSSDUG00000022410	gfi1ab	100	78.238	ENSORLG00000013806	gfi1ab	100	77.979	Oryzias_latipes
ENSSDUG00000022410	gfi1ab	100	62.755	ENSORLG00000005060	GFI1	100	62.755	Oryzias_latipes
ENSSDUG00000022410	gfi1ab	100	56.589	ENSORLG00020002817	GFI1	100	56.589	Oryzias_latipes_hni
ENSSDUG00000022410	gfi1ab	100	77.461	ENSORLG00020001602	gfi1ab	100	77.202	Oryzias_latipes_hni
ENSSDUG00000022410	gfi1ab	100	62.183	ENSORLG00015006070	GFI1	100	62.183	Oryzias_latipes_hsok
ENSSDUG00000022410	gfi1ab	100	61.013	ENSOMEG00000016722	GFI1	100	61.519	Oryzias_melastigma
ENSSDUG00000022410	gfi1ab	100	64.767	ENSOGAG00000027913	GFI1	100	64.767	Otolemur_garnettii
ENSSDUG00000022410	gfi1ab	98	50.784	ENSOARG00000016329	GFI1	93	50.784	Ovis_aries
ENSSDUG00000022410	gfi1ab	100	65.544	ENSPPAG00000042186	GFI1	100	65.544	Pan_paniscus
ENSSDUG00000022410	gfi1ab	100	62.118	ENSPPRG00000007521	GFI1	100	62.118	Panthera_pardus
ENSSDUG00000022410	gfi1ab	100	62.118	ENSPTRG00000043053	GFI1	100	62.676	Pan_troglodytes
ENSSDUG00000022410	gfi1ab	100	62.118	ENSPANG00000016433	GFI1	100	62.676	Papio_anubis
ENSSDUG00000022410	gfi1ab	100	69.327	ENSPKIG00000004263	GFI1	100	69.327	Paramormyrops_kingsleyae
ENSSDUG00000022410	gfi1ab	87	66.377	ENSPSIG00000008734	GFI1	96	66.087	Pelodiscus_sinensis
ENSSDUG00000022410	gfi1ab	99	52.800	ENSPMGG00000011041	GFI1	68	85.165	Periophthalmus_magnuspinnatus
ENSSDUG00000022410	gfi1ab	100	78.442	ENSPMGG00000012546	gfi1ab	100	78.442	Periophthalmus_magnuspinnatus
ENSSDUG00000022410	gfi1ab	100	62.648	ENSPCIG00000013728	GFI1	100	63.357	Phascolarctos_cinereus
ENSSDUG00000022410	gfi1ab	100	80.818	ENSPFOG00000023214	gfi1ab	100	80.563	Poecilia_formosa
ENSSDUG00000022410	gfi1ab	100	80.818	ENSPLAG00000010879	gfi1ab	100	80.563	Poecilia_latipinna
ENSSDUG00000022410	gfi1ab	100	59.360	ENSPLAG00000005376	GFI1	91	61.235	Poecilia_latipinna
ENSSDUG00000022410	gfi1ab	100	59.850	ENSPMEG00000019299	GFI1	100	61.097	Poecilia_mexicana
ENSSDUG00000022410	gfi1ab	100	81.074	ENSPMEG00000013694	gfi1ab	100	80.818	Poecilia_mexicana
ENSSDUG00000022410	gfi1ab	100	56.806	ENSPREG00000007997	GFI1	100	56.915	Poecilia_reticulata
ENSSDUG00000022410	gfi1ab	100	81.491	ENSPREG00000014097	gfi1ab	100	81.234	Poecilia_reticulata
ENSSDUG00000022410	gfi1ab	100	50.580	ENSPCAG00000011020	GFI1	100	50.580	Procavia_capensis
ENSSDUG00000022410	gfi1ab	100	61.647	ENSPCOG00000020540	GFI1	100	61.647	Propithecus_coquereli
ENSSDUG00000022410	gfi1ab	100	61.667	ENSPVAG00000006928	GFI1	100	62.143	Pteropus_vampyrus
ENSSDUG00000022410	gfi1ab	100	85.530	ENSPNYG00000021183	gfi1ab	100	85.271	Pundamilia_nyererei
ENSSDUG00000022410	gfi1ab	100	58.031	ENSPNAG00000014299	-	63	58.031	Pygocentrus_nattereri
ENSSDUG00000022410	gfi1ab	100	57.711	ENSPNAG00000028014	GFI1	100	58.779	Pygocentrus_nattereri
ENSSDUG00000022410	gfi1ab	100	64.796	ENSPNAG00000027258	gfi1ab	100	64.541	Pygocentrus_nattereri
ENSSDUG00000022410	gfi1ab	100	60.993	ENSRNOG00000002042	Gfi1	100	60.757	Rattus_norvegicus
ENSSDUG00000022410	gfi1ab	100	62.118	ENSRBIG00000036467	GFI1	100	62.676	Rhinopithecus_bieti
ENSSDUG00000022410	gfi1ab	100	62.118	ENSRROG00000031687	GFI1	100	62.676	Rhinopithecus_roxellana
ENSSDUG00000022410	gfi1ab	100	62.588	ENSSBOG00000031300	GFI1	100	62.441	Saimiri_boliviensis_boliviensis
ENSSDUG00000022410	gfi1ab	100	72.237	ENSSFOG00015020295	gfi1	100	71.979	Scleropages_formosus
ENSSDUG00000022410	gfi1ab	100	82.519	ENSSMAG00000002782	gfi1ab	100	82.262	Scophthalmus_maximus
ENSSDUG00000022410	gfi1ab	100	99.200	ENSSLDG00000020163	gfi1ab	100	99.200	Seriola_lalandi_dorsalis
ENSSDUG00000022410	gfi1ab	82	88.929	ENSSPAG00000009140	gfi1ab	100	88.929	Stegastes_partitus
ENSSDUG00000022410	gfi1ab	100	64.200	ENSSSCG00000006902	GFI1	100	64.678	Sus_scrofa
ENSSDUG00000022410	gfi1ab	88	65.318	ENSTGUG00000006060	GFI1	99	65.318	Taeniopygia_guttata
ENSSDUG00000022410	gfi1ab	100	78.093	ENSTRUG00000000415	gfi1ab	100	77.835	Takifugu_rubripes
ENSSDUG00000022410	gfi1ab	100	73.265	ENSTNIG00000000651	gfi1ab	97	73.127	Tetraodon_nigroviridis
ENSSDUG00000022410	gfi1ab	100	63.420	ENSTTRG00000000082	GFI1	100	63.420	Tursiops_truncatus
ENSSDUG00000022410	gfi1ab	100	63.196	ENSUAMG00000021124	GFI1	91	63.814	Ursus_americanus
ENSSDUG00000022410	gfi1ab	100	64.796	ENSXETG00000023006	gfi1	98	64.796	Xenopus_tropicalis
ENSSDUG00000022410	gfi1ab	100	81.234	ENSXMAG00000010523	gfi1ab	100	80.977	Xiphophorus_maculatus
ENSSDUG00000022410	gfi1ab	87	50.838	ENSXMAG00000009274	GFI1	72	52.368	Xiphophorus_maculatus