EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000022459 (Gene tree)
Gene ID: 111217369
Gene Symbol: ddx23
Alias: wu:fi39b12|zgc:63742
Full Name: DEAD-box helicase 23
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 12614 bases
Position: chrBDQW01000043.1:387544-400157
Accession: 111217369
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000031260	DEAD	PF00270.29	1e-52	1	1
ENSSDUP00000031252	DEAD	PF00270.29	1.3e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000031796	-	2190	-	ENSSDUP00000031260	729 (aa)	-	-
ENSSDUT00000031788	-	7131	XM_022739201	ENSSDUP00000031252	806 (aa)	XP_022594922	UPI000BBE991F

Gene Model

Click here to download ENSSDUG00000022459's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022459's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000022459	ddx23	57	38.263	ENSSDUG00000013166	-	61	36.569
ENSSDUG00000022459	ddx23	60	35.080	ENSSDUG00000007138	kif14	64	35.080
ENSSDUG00000022459	ddx23	61	38.229	ENSSDUG00000008456	fam193b	67	39.150
ENSSDUG00000022459	ddx23	57	31.643	ENSSDUG00000007530	-	76	31.643
ENSSDUG00000022459	ddx23	58	39.623	ENSSDUG00000019456	DDX5	62	39.623
ENSSDUG00000022459	ddx23	58	39.858	ENSSDUG00000017954	ddx5	68	39.858
ENSSDUG00000022459	ddx23	58	38.710	ENSSDUG00000016136	-	82	38.710
ENSSDUG00000022459	ddx23	55	30.660	ENSSDUG00000023568	ddx55	65	30.660
ENSSDUG00000022459	ddx23	54	37.688	ENSSDUG00000022015	ddx4	59	37.563
ENSSDUG00000022459	ddx23	58	31.517	ENSSDUG00000009713	ddx61	77	31.517
ENSSDUG00000022459	ddx23	56	30.024	ENSSDUG00000004913	eif4a1b	93	30.024
ENSSDUG00000022459	ddx23	57	39.474	ENSSDUG00000020428	-	65	37.821
ENSSDUG00000022459	ddx23	56	30.900	ENSSDUG00000010103	eif4a2	91	30.900
ENSSDUG00000022459	ddx23	52	32.216	ENSSDUG00000009696	ddx49	72	32.216
ENSSDUG00000022459	ddx23	59	40.596	ENSSDUG00000020120	ddx43	57	40.690
ENSSDUG00000022459	ddx23	65	34.921	ENSSDUG00000004279	-	65	37.381
ENSSDUG00000022459	ddx23	57	31.884	ENSSDUG00000019695	ddx6	77	31.884
ENSSDUG00000022459	ddx23	52	31.282	ENSSDUG00000005957	ddx18	53	31.807
ENSSDUG00000022459	ddx23	52	36.815	ENSSDUG00000018110	ddx47	66	36.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022459	ddx23	100	85.593	ENSG00000174243	DDX23	100	84.672	Homo_sapiens
ENSSDUG00000022459	ddx23	100	98.015	ENSAPOG00000003760	ddx23	100	98.015	Acanthochromis_polyacanthus
ENSSDUG00000022459	ddx23	100	85.472	ENSAMEG00000007123	DDX23	100	84.550	Ailuropoda_melanoleuca
ENSSDUG00000022459	ddx23	100	92.706	ENSACIG00000000022	ddx23	100	91.447	Amphilophus_citrinellus
ENSSDUG00000022459	ddx23	100	98.015	ENSAOCG00000017348	ddx23	100	98.015	Amphiprion_ocellaris
ENSSDUG00000022459	ddx23	100	97.519	ENSAPEG00000016857	ddx23	100	97.519	Amphiprion_percula
ENSSDUG00000022459	ddx23	100	97.270	ENSATEG00000016800	ddx23	100	97.270	Anabas_testudineus
ENSSDUG00000022459	ddx23	99	76.671	ENSAPLG00000002868	DDX23	90	81.461	Anas_platyrhynchos
ENSSDUG00000022459	ddx23	100	84.848	ENSACAG00000025589	DDX23	96	84.307	Anolis_carolinensis
ENSSDUG00000022459	ddx23	100	85.351	ENSANAG00000018663	DDX23	100	84.550	Aotus_nancymaae
ENSSDUG00000022459	ddx23	100	87.085	ENSAMXG00000017597	ddx23	100	89.053	Astyanax_mexicanus
ENSSDUG00000022459	ddx23	100	85.835	ENSBTAG00000021810	DDX23	100	84.550	Bos_taurus
ENSSDUG00000022459	ddx23	100	84.867	ENSCJAG00000020775	DDX23	100	84.550	Callithrix_jacchus
ENSSDUG00000022459	ddx23	100	85.351	ENSCAFG00000025422	DDX23	100	84.185	Canis_familiaris
ENSSDUG00000022459	ddx23	100	85.351	ENSCAFG00020013383	DDX23	100	84.185	Canis_lupus_dingo
ENSSDUG00000022459	ddx23	100	85.714	ENSCHIG00000018783	DDX23	100	84.428	Capra_hircus
ENSSDUG00000022459	ddx23	100	85.230	ENSTSYG00000005429	DDX23	100	84.063	Carlito_syrichta
ENSSDUG00000022459	ddx23	100	84.867	ENSCPOG00000003278	DDX23	100	84.185	Cavia_porcellus
ENSSDUG00000022459	ddx23	89	95.000	ENSCCAG00000029177	DDX23	100	95.000	Cebus_capucinus
ENSSDUG00000022459	ddx23	100	85.593	ENSCATG00000039797	DDX23	100	84.672	Cercocebus_atys
ENSSDUG00000022459	ddx23	100	72.761	ENSCATG00000032335	-	100	71.867	Cercocebus_atys
ENSSDUG00000022459	ddx23	100	85.472	ENSCLAG00000002986	DDX23	100	84.550	Chinchilla_lanigera
ENSSDUG00000022459	ddx23	100	85.593	ENSCSAG00000006240	DDX23	100	84.672	Chlorocebus_sabaeus
ENSSDUG00000022459	ddx23	84	82.014	ENSCHOG00000009027	DDX23	100	82.029	Choloepus_hoffmanni
ENSSDUG00000022459	ddx23	100	85.190	ENSCPBG00000019988	DDX23	100	86.241	Chrysemys_picta_bellii
ENSSDUG00000022459	ddx23	99	70.082	ENSCING00000001913	-	94	72.000	Ciona_intestinalis
ENSSDUG00000022459	ddx23	91	66.667	ENSCSAVG00000004158	-	100	66.716	Ciona_savignyi
ENSSDUG00000022459	ddx23	100	71.199	ENSCANG00000042510	-	100	70.173	Colobus_angolensis_palliatus
ENSSDUG00000022459	ddx23	91	92.879	ENSCANG00000040182	DDX23	100	90.884	Colobus_angolensis_palliatus
ENSSDUG00000022459	ddx23	100	85.018	ENSCGRG00001015090	Ddx23	100	84.896	Cricetulus_griseus_chok1gshd
ENSSDUG00000022459	ddx23	100	85.018	ENSCGRG00000016314	Ddx23	100	84.896	Cricetulus_griseus_crigri
ENSSDUG00000022459	ddx23	100	90.199	ENSCSEG00000020970	ddx23	100	92.620	Cynoglossus_semilaevis
ENSSDUG00000022459	ddx23	100	95.285	ENSCVAG00000015745	ddx23	100	95.409	Cyprinodon_variegatus
ENSSDUG00000022459	ddx23	91	94.856	ENSDARG00000021945	ddx23	100	88.889	Danio_rerio
ENSSDUG00000022459	ddx23	100	84.401	ENSDNOG00000043176	DDX23	100	84.428	Dasypus_novemcinctus
ENSSDUG00000022459	ddx23	100	85.593	ENSDORG00000012659	Ddx23	100	84.672	Dipodomys_ordii
ENSSDUG00000022459	ddx23	81	76.949	FBgn0032690	CG10333	72	76.342	Drosophila_melanogaster
ENSSDUG00000022459	ddx23	91	89.394	ENSETEG00000015816	DDX23	95	83.959	Echinops_telfairi
ENSSDUG00000022459	ddx23	98	78.903	ENSEBUG00000003319	ddx23	93	83.939	Eptatretus_burgeri
ENSSDUG00000022459	ddx23	100	85.472	ENSEASG00005000455	DDX23	100	84.550	Equus_asinus_asinus
ENSSDUG00000022459	ddx23	100	85.593	ENSECAG00000016681	DDX23	100	84.672	Equus_caballus
ENSSDUG00000022459	ddx23	100	78.623	ENSEEUG00000009658	DDX23	100	76.335	Erinaceus_europaeus
ENSSDUG00000022459	ddx23	100	89.681	ENSELUG00000015358	ddx23	100	88.684	Esox_lucius
ENSSDUG00000022459	ddx23	100	85.351	ENSFCAG00000000082	DDX23	100	84.550	Felis_catus
ENSSDUG00000022459	ddx23	100	82.382	ENSFALG00000000133	DDX23	100	82.619	Ficedula_albicollis
ENSSDUG00000022459	ddx23	100	85.835	ENSFDAG00000017059	DDX23	100	84.672	Fukomys_damarensis
ENSSDUG00000022459	ddx23	100	94.665	ENSFHEG00000017499	ddx23	100	94.665	Fundulus_heteroclitus
ENSSDUG00000022459	ddx23	99	89.027	ENSGMOG00000009592	ddx23	98	89.133	Gadus_morhua
ENSSDUG00000022459	ddx23	100	85.958	ENSGALG00000032307	DDX23	100	85.330	Gallus_gallus
ENSSDUG00000022459	ddx23	100	95.533	ENSGAFG00000012366	ddx23	100	95.533	Gambusia_affinis
ENSSDUG00000022459	ddx23	99	92.982	ENSGACG00000003024	ddx23	100	96.500	Gasterosteus_aculeatus
ENSSDUG00000022459	ddx23	100	85.190	ENSGAGG00000007790	DDX23	100	86.241	Gopherus_agassizii
ENSSDUG00000022459	ddx23	100	85.593	ENSGGOG00000015252	DDX23	100	94.408	Gorilla_gorilla
ENSSDUG00000022459	ddx23	100	96.526	ENSHBUG00000011876	ddx23	100	96.526	Haplochromis_burtoni
ENSSDUG00000022459	ddx23	100	85.472	ENSHGLG00000004292	DDX23	100	83.942	Heterocephalus_glaber_female
ENSSDUG00000022459	ddx23	100	85.472	ENSHGLG00100017585	DDX23	100	83.942	Heterocephalus_glaber_male
ENSSDUG00000022459	ddx23	100	93.797	ENSHCOG00000019338	ddx23	100	93.548	Hippocampus_comes
ENSSDUG00000022459	ddx23	100	89.409	ENSIPUG00000005247	DDX23	100	89.851	Ictalurus_punctatus
ENSSDUG00000022459	ddx23	100	85.351	ENSSTOG00000004219	DDX23	100	84.550	Ictidomys_tridecemlineatus
ENSSDUG00000022459	ddx23	100	84.643	ENSJJAG00000018994	Ddx23	100	84.672	Jaculus_jaculus
ENSSDUG00000022459	ddx23	98	96.667	ENSKMAG00000012060	ddx23	97	96.667	Kryptolebias_marmoratus
ENSSDUG00000022459	ddx23	100	94.665	ENSLBEG00000019475	ddx23	100	94.665	Labrus_bergylta
ENSSDUG00000022459	ddx23	94	89.390	ENSLACG00000016977	DDX23	96	89.945	Latimeria_chalumnae
ENSSDUG00000022459	ddx23	100	87.897	ENSLOCG00000007385	ddx23	100	88.998	Lepisosteus_oculatus
ENSSDUG00000022459	ddx23	100	84.988	ENSLAFG00000014227	DDX23	100	84.185	Loxodonta_africana
ENSSDUG00000022459	ddx23	100	85.593	ENSMFAG00000038666	DDX23	100	84.672	Macaca_fascicularis
ENSSDUG00000022459	ddx23	100	85.593	ENSMMUG00000008432	DDX23	100	94.408	Macaca_mulatta
ENSSDUG00000022459	ddx23	100	72.515	ENSMNEG00000045260	-	100	71.007	Macaca_nemestrina
ENSSDUG00000022459	ddx23	100	85.351	ENSMNEG00000040016	DDX23	100	84.428	Macaca_nemestrina
ENSSDUG00000022459	ddx23	100	85.593	ENSMLEG00000042846	DDX23	100	84.672	Mandrillus_leucophaeus
ENSSDUG00000022459	ddx23	100	71.359	ENSMLEG00000035096	-	100	70.603	Mandrillus_leucophaeus
ENSSDUG00000022459	ddx23	100	96.774	ENSMAMG00000024144	ddx23	100	96.774	Mastacembelus_armatus
ENSSDUG00000022459	ddx23	100	96.526	ENSMZEG00005026086	ddx23	100	96.526	Maylandia_zebra
ENSSDUG00000022459	ddx23	100	84.896	ENSMAUG00000012336	Ddx23	100	84.409	Mesocricetus_auratus
ENSSDUG00000022459	ddx23	100	84.970	ENSMICG00000017541	DDX23	100	84.512	Microcebus_murinus
ENSSDUG00000022459	ddx23	100	85.194	ENSMOCG00000018987	Ddx23	100	85.018	Microtus_ochrogaster
ENSSDUG00000022459	ddx23	100	87.824	ENSMMOG00000012406	ddx23	100	87.047	Mola_mola
ENSSDUG00000022459	ddx23	91	92.727	ENSMODG00000009975	DDX23	100	85.000	Monodelphis_domestica
ENSSDUG00000022459	ddx23	100	95.658	ENSMALG00000022366	ddx23	100	95.658	Monopterus_albus
ENSSDUG00000022459	ddx23	100	85.055	MGP_CAROLIEiJ_G0020240	Ddx23	100	84.896	Mus_caroli
ENSSDUG00000022459	ddx23	100	84.933	ENSMUSG00000003360	Ddx23	100	84.775	Mus_musculus
ENSSDUG00000022459	ddx23	100	84.812	MGP_PahariEiJ_G0020243	Ddx23	100	84.653	Mus_pahari
ENSSDUG00000022459	ddx23	100	84.933	MGP_SPRETEiJ_G0021137	Ddx23	100	84.775	Mus_spretus
ENSSDUG00000022459	ddx23	100	85.472	ENSMPUG00000014739	DDX23	100	84.672	Mustela_putorius_furo
ENSSDUG00000022459	ddx23	100	85.073	ENSMLUG00000011033	-	100	84.512	Myotis_lucifugus
ENSSDUG00000022459	ddx23	100	82.082	ENSMLUG00000003683	-	100	81.265	Myotis_lucifugus
ENSSDUG00000022459	ddx23	100	85.472	ENSNGAG00000019018	Ddx23	100	84.550	Nannospalax_galili
ENSSDUG00000022459	ddx23	98	97.731	ENSNBRG00000022928	ddx23	100	93.285	Neolamprologus_brichardi
ENSSDUG00000022459	ddx23	100	78.935	ENSNLEG00000017864	DDX23	100	77.981	Nomascus_leucogenys
ENSSDUG00000022459	ddx23	100	84.896	ENSMEUG00000009477	DDX23	100	85.122	Notamacropus_eugenii
ENSSDUG00000022459	ddx23	100	85.212	ENSOPRG00000007170	-	100	84.756	Ochotona_princeps
ENSSDUG00000022459	ddx23	100	85.714	ENSODEG00000003592	DDX23	100	84.793	Octodon_degus
ENSSDUG00000022459	ddx23	100	96.650	ENSONIG00000017048	ddx23	100	96.650	Oreochromis_niloticus
ENSSDUG00000022459	ddx23	100	85.351	ENSOCUG00000001414	DDX23	100	84.428	Oryctolagus_cuniculus
ENSSDUG00000022459	ddx23	98	95.461	ENSORLG00000012330	ddx23	100	92.060	Oryzias_latipes
ENSSDUG00000022459	ddx23	98	95.613	ENSORLG00020017586	ddx23	100	92.184	Oryzias_latipes_hni
ENSSDUG00000022459	ddx23	100	90.584	ENSORLG00015012361	ddx23	100	90.981	Oryzias_latipes_hsok
ENSSDUG00000022459	ddx23	98	96.672	ENSOMEG00000006453	ddx23	100	92.822	Oryzias_melastigma
ENSSDUG00000022459	ddx23	100	85.230	ENSOGAG00000016813	DDX23	100	84.550	Otolemur_garnettii
ENSSDUG00000022459	ddx23	100	85.714	ENSOARG00000019105	DDX23	90	84.428	Ovis_aries
ENSSDUG00000022459	ddx23	100	85.593	ENSPPAG00000037807	DDX23	100	94.408	Pan_paniscus
ENSSDUG00000022459	ddx23	100	63.152	ENSPPAG00000038775	-	100	61.747	Pan_paniscus
ENSSDUG00000022459	ddx23	100	85.351	ENSPPRG00000015345	DDX23	100	84.550	Panthera_pardus
ENSSDUG00000022459	ddx23	100	85.351	ENSPTIG00000018873	DDX23	100	84.550	Panthera_tigris_altaica
ENSSDUG00000022459	ddx23	100	85.472	ENSPTRG00000004887	DDX23	100	94.408	Pan_troglodytes
ENSSDUG00000022459	ddx23	100	66.462	ENSPTRG00000051972	-	100	64.488	Pan_troglodytes
ENSSDUG00000022459	ddx23	100	85.593	ENSPANG00000019459	DDX23	92	84.307	Papio_anubis
ENSSDUG00000022459	ddx23	90	84.337	ENSPANG00000035074	-	99	84.337	Papio_anubis
ENSSDUG00000022459	ddx23	100	88.767	ENSPKIG00000024110	ddx23	100	88.278	Paramormyrops_kingsleyae
ENSSDUG00000022459	ddx23	100	75.743	ENSPSIG00000002834	DDX23	100	76.885	Pelodiscus_sinensis
ENSSDUG00000022459	ddx23	100	89.109	ENSPMGG00000010243	ddx23	100	89.235	Periophthalmus_magnuspinnatus
ENSSDUG00000022459	ddx23	100	85.437	ENSPEMG00000011305	Ddx23	100	85.018	Peromyscus_maniculatus_bairdii
ENSSDUG00000022459	ddx23	91	85.477	ENSPMAG00000008625	ddx23	97	83.128	Petromyzon_marinus
ENSSDUG00000022459	ddx23	100	85.140	ENSPCIG00000027691	DDX23	100	85.122	Phascolarctos_cinereus
ENSSDUG00000022459	ddx23	98	97.879	ENSPFOG00000012159	ddx23	100	92.831	Poecilia_formosa
ENSSDUG00000022459	ddx23	100	96.154	ENSPLAG00000005052	ddx23	100	96.154	Poecilia_latipinna
ENSSDUG00000022459	ddx23	100	95.782	ENSPMEG00000015385	ddx23	100	96.030	Poecilia_mexicana
ENSSDUG00000022459	ddx23	100	96.278	ENSPREG00000007074	ddx23	100	96.278	Poecilia_reticulata
ENSSDUG00000022459	ddx23	100	85.593	ENSPPYG00000004468	DDX23	97	84.672	Pongo_abelii
ENSSDUG00000022459	ddx23	91	92.576	ENSPCAG00000002016	DDX23	100	82.073	Procavia_capensis
ENSSDUG00000022459	ddx23	100	85.351	ENSPCOG00000025915	DDX23	100	94.408	Propithecus_coquereli
ENSSDUG00000022459	ddx23	100	85.472	ENSPVAG00000009818	DDX23	100	84.672	Pteropus_vampyrus
ENSSDUG00000022459	ddx23	100	91.966	ENSPNYG00000021038	ddx23	100	91.966	Pundamilia_nyererei
ENSSDUG00000022459	ddx23	100	89.402	ENSPNAG00000019203	ddx23	99	90.515	Pygocentrus_nattereri
ENSSDUG00000022459	ddx23	100	85.055	ENSRNOG00000060154	Ddx23	100	84.775	Rattus_norvegicus
ENSSDUG00000022459	ddx23	98	76.000	ENSRBIG00000040362	DDX23	100	72.384	Rhinopithecus_bieti
ENSSDUG00000022459	ddx23	100	71.182	ENSRBIG00000036337	-	93	76.860	Rhinopithecus_bieti
ENSSDUG00000022459	ddx23	100	85.593	ENSRROG00000028964	DDX23	100	84.672	Rhinopithecus_roxellana
ENSSDUG00000022459	ddx23	100	71.354	ENSRROG00000045747	-	93	78.042	Rhinopithecus_roxellana
ENSSDUG00000022459	ddx23	80	36.683	YDR243C	-	81	38.662	Saccharomyces_cerevisiae
ENSSDUG00000022459	ddx23	100	85.351	ENSSBOG00000025799	DDX23	100	84.550	Saimiri_boliviensis_boliviensis
ENSSDUG00000022459	ddx23	100	84.896	ENSSHAG00000006590	DDX23	100	85.122	Sarcophilus_harrisii
ENSSDUG00000022459	ddx23	91	95.455	ENSSFOG00015013273	ddx23	100	90.453	Scleropages_formosus
ENSSDUG00000022459	ddx23	98	96.061	ENSSMAG00000000529	ddx23	100	93.185	Scophthalmus_maximus
ENSSDUG00000022459	ddx23	100	99.752	ENSSLDG00000010453	ddx23	100	99.752	Seriola_lalandi_dorsalis
ENSSDUG00000022459	ddx23	92	94.708	ENSSARG00000004534	DDX23	92	94.708	Sorex_araneus
ENSSDUG00000022459	ddx23	100	85.470	ENSSPUG00000016044	DDX23	96	86.845	Sphenodon_punctatus
ENSSDUG00000022459	ddx23	100	97.643	ENSSPAG00000016482	ddx23	100	97.643	Stegastes_partitus
ENSSDUG00000022459	ddx23	100	85.714	ENSSSCG00000000176	DDX23	100	84.793	Sus_scrofa
ENSSDUG00000022459	ddx23	97	93.930	ENSTRUG00000000455	ddx23	100	88.600	Takifugu_rubripes
ENSSDUG00000022459	ddx23	91	92.879	ENSTBEG00000016909	DDX23	100	82.073	Tupaia_belangeri
ENSSDUG00000022459	ddx23	100	79.298	ENSTTRG00000004604	DDX23	100	78.224	Tursiops_truncatus
ENSSDUG00000022459	ddx23	100	85.593	ENSUAMG00000027082	DDX23	100	84.672	Ursus_americanus
ENSSDUG00000022459	ddx23	100	85.593	ENSUMAG00000006538	DDX23	100	84.672	Ursus_maritimus
ENSSDUG00000022459	ddx23	100	85.351	ENSVVUG00000019648	DDX23	100	84.185	Vulpes_vulpes
ENSSDUG00000022459	ddx23	100	79.632	ENSXETG00000009807	ddx23	100	80.515	Xenopus_tropicalis
ENSSDUG00000022459	ddx23	100	91.563	ENSXCOG00000011648	ddx23	100	91.563	Xiphophorus_couchianus
ENSSDUG00000022459	ddx23	100	95.906	ENSXMAG00000017387	ddx23	100	95.906	Xiphophorus_maculatus