EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000022556 (Gene tree)
Gene ID: 111232029
Gene Symbol: zgc:171480
Alias: -
Full Name: mitochondrial ribosomal protein L55
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 1781 bases
Position: chrBDQW01000321.1:1927944-1929724
Accession: 111232029
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000031367	Mitoc_L55	PF09776.9	8.3e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000031907	-	852	XM_022759364	ENSSDUP00000031367	147 (aa)	XP_022615085	UPI000BBE77AE

Gene Model

Click here to download ENSSDUG00000022556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022556's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022556	zgc:171480	95	68.056	ENSAPOG00000002881	zgc:171480	100	68.056	Acanthochromis_polyacanthus
ENSSDUG00000022556	zgc:171480	95	67.857	ENSACIG00000001646	zgc:171480	98	67.857	Amphilophus_citrinellus
ENSSDUG00000022556	zgc:171480	95	71.528	ENSAOCG00000016155	zgc:171480	100	71.528	Amphiprion_ocellaris
ENSSDUG00000022556	zgc:171480	95	72.222	ENSAPEG00000022327	zgc:171480	100	72.222	Amphiprion_percula
ENSSDUG00000022556	zgc:171480	95	69.655	ENSATEG00000005625	zgc:171480	99	69.655	Anabas_testudineus
ENSSDUG00000022556	zgc:171480	68	57.426	ENSACAG00000006897	-	80	57.426	Anolis_carolinensis
ENSSDUG00000022556	zgc:171480	95	60.839	ENSACLG00000005172	zgc:171480	99	60.839	Astatotilapia_calliptera
ENSSDUG00000022556	zgc:171480	94	51.799	ENSAMXG00000043839	zgc:171480	99	53.571	Astyanax_mexicanus
ENSSDUG00000022556	zgc:171480	71	58.879	ENSCPBG00000001771	-	83	58.879	Chrysemys_picta_bellii
ENSSDUG00000022556	zgc:171480	97	59.859	ENSCSEG00000019533	zgc:171480	99	59.859	Cynoglossus_semilaevis
ENSSDUG00000022556	zgc:171480	95	50.000	ENSDARG00000043402	zgc:171480	98	50.360	Danio_rerio
ENSSDUG00000022556	zgc:171480	94	51.799	ENSELUG00000007716	zgc:171480	100	51.799	Esox_lucius
ENSSDUG00000022556	zgc:171480	62	43.956	ENSFALG00000001083	-	94	43.956	Ficedula_albicollis
ENSSDUG00000022556	zgc:171480	72	66.038	ENSFHEG00000000203	zgc:171480	89	59.677	Fundulus_heteroclitus
ENSSDUG00000022556	zgc:171480	69	73.529	ENSGMOG00000019009	zgc:171480	100	73.529	Gadus_morhua
ENSSDUG00000022556	zgc:171480	67	47.059	ENSGALG00000038820	-	87	47.059	Gallus_gallus
ENSSDUG00000022556	zgc:171480	88	58.915	ENSGAFG00000004832	-	88	58.915	Gambusia_affinis
ENSSDUG00000022556	zgc:171480	63	79.348	ENSGACG00000002136	zgc:171480	100	79.348	Gasterosteus_aculeatus
ENSSDUG00000022556	zgc:171480	71	53.846	ENSGAGG00000001806	-	84	53.846	Gopherus_agassizii
ENSSDUG00000022556	zgc:171480	95	60.839	ENSHBUG00000007895	zgc:171480	99	60.839	Haplochromis_burtoni
ENSSDUG00000022556	zgc:171480	78	70.940	ENSHCOG00000003526	zgc:171480	64	70.940	Hippocampus_comes
ENSSDUG00000022556	zgc:171480	76	57.018	ENSIPUG00000001273	mrpl55	86	57.018	Ictalurus_punctatus
ENSSDUG00000022556	zgc:171480	88	60.465	ENSKMAG00000002011	zgc:171480	98	60.465	Kryptolebias_marmoratus
ENSSDUG00000022556	zgc:171480	95	64.748	ENSLBEG00000010915	zgc:171480	100	64.748	Labrus_bergylta
ENSSDUG00000022556	zgc:171480	95	64.748	ENSLBEG00000016107	-	100	64.748	Labrus_bergylta
ENSSDUG00000022556	zgc:171480	79	53.846	ENSLACG00000016281	zgc:171480	86	53.846	Latimeria_chalumnae
ENSSDUG00000022556	zgc:171480	96	72.603	ENSMAMG00000022250	zgc:171480	99	72.603	Mastacembelus_armatus
ENSSDUG00000022556	zgc:171480	95	60.839	ENSMZEG00005015585	zgc:171480	99	60.839	Maylandia_zebra
ENSSDUG00000022556	zgc:171480	67	45.098	ENSMGAG00000002612	-	87	45.098	Meleagris_gallopavo
ENSSDUG00000022556	zgc:171480	70	53.398	ENSMMOG00000008740	-	78	53.398	Mola_mola
ENSSDUG00000022556	zgc:171480	96	57.447	ENSMALG00000019823	zgc:171480	99	57.447	Monopterus_albus
ENSSDUG00000022556	zgc:171480	95	60.140	ENSNBRG00000019447	zgc:171480	99	60.140	Neolamprologus_brichardi
ENSSDUG00000022556	zgc:171480	95	61.268	ENSONIG00000007645	zgc:171480	100	61.268	Oreochromis_niloticus
ENSSDUG00000022556	zgc:171480	99	54.795	ENSORLG00000026616	-	58	54.795	Oryzias_latipes
ENSSDUG00000022556	zgc:171480	80	59.524	ENSORLG00020006963	zgc:171480	94	59.524	Oryzias_latipes_hni
ENSSDUG00000022556	zgc:171480	84	61.290	ENSORLG00015003266	zgc:171480	94	61.111	Oryzias_latipes_hsok
ENSSDUG00000022556	zgc:171480	96	55.319	ENSOMEG00000008184	zgc:171480	99	55.319	Oryzias_melastigma
ENSSDUG00000022556	zgc:171480	77	52.632	ENSPKIG00000006753	zgc:171480	85	52.632	Paramormyrops_kingsleyae
ENSSDUG00000022556	zgc:171480	81	50.833	ENSPSIG00000010893	-	93	50.833	Pelodiscus_sinensis
ENSSDUG00000022556	zgc:171480	70	64.423	ENSPMGG00000012657	-	81	64.423	Periophthalmus_magnuspinnatus
ENSSDUG00000022556	zgc:171480	63	47.368	ENSPMAG00000000867	zgc:171480	82	46.875	Petromyzon_marinus
ENSSDUG00000022556	zgc:171480	76	50.427	ENSPCIG00000021848	-	90	50.427	Phascolarctos_cinereus
ENSSDUG00000022556	zgc:171480	96	58.865	ENSPFOG00000012703	zgc:171480	99	58.865	Poecilia_formosa
ENSSDUG00000022556	zgc:171480	96	58.865	ENSPREG00000020328	zgc:171480	99	58.865	Poecilia_reticulata
ENSSDUG00000022556	zgc:171480	94	52.857	ENSPNAG00000017309	zgc:171480	99	52.857	Pygocentrus_nattereri
ENSSDUG00000022556	zgc:171480	94	51.079	ENSSFOG00015015668	mrpl55	100	51.079	Scleropages_formosus
ENSSDUG00000022556	zgc:171480	95	70.423	ENSSMAG00000005429	zgc:171480	98	70.423	Scophthalmus_maximus
ENSSDUG00000022556	zgc:171480	100	99.320	ENSSLDG00000019598	zgc:171480	100	99.320	Seriola_lalandi_dorsalis
ENSSDUG00000022556	zgc:171480	76	49.550	ENSSPUG00000000735	-	89	49.550	Sphenodon_punctatus
ENSSDUG00000022556	zgc:171480	95	73.050	ENSSPAG00000011598	zgc:171480	100	73.050	Stegastes_partitus
ENSSDUG00000022556	zgc:171480	95	54.730	ENSTRUG00000003082	zgc:171480	100	54.730	Takifugu_rubripes
ENSSDUG00000022556	zgc:171480	63	68.817	ENSXCOG00000005887	zgc:171480	76	68.817	Xiphophorus_couchianus
ENSSDUG00000022556	zgc:171480	88	59.690	ENSXMAG00000007937	zgc:171480	99	57.447	Xiphophorus_maculatus