EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000022611 (Gene tree)
Gene ID: 111217388
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 18175 bases
Position: chrBDQW01000043.1:497843-516017
Accession: 111217388
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000031439	RRM_1	PF00076.22	3.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000031981	-	2153	XM_022739235	ENSSDUP00000031439	250 (aa)	XP_022594956	UPI000BBE780C

Gene Model

Click here to download ENSSDUG00000022611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022611's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000022611	rbm38	88	30.208	ENSSDUG00000022697	-	91	30.208
ENSSDUG00000022611	rbm38	88	30.526	ENSSDUG00000001027	MSI1	91	30.526
ENSSDUG00000022611	rbm38	54	75.556	ENSSDUG00000010760	rbm24a	100	57.028
ENSSDUG00000022611	rbm38	98	66.667	ENSSDUG00000021082	RBM38	100	67.059
ENSSDUG00000022611	rbm38	62	70.440	ENSSDUG00000005955	rbm24b	100	56.917

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022611	rbm38	91	60.086	ENSG00000132819	RBM38	94	82.051	Homo_sapiens
ENSSDUG00000022611	rbm38	98	66.270	ENSAPOG00000009939	-	100	67.589	Acanthochromis_polyacanthus
ENSSDUG00000022611	rbm38	100	96.000	ENSAPOG00000003301	rbm38	100	96.000	Acanthochromis_polyacanthus
ENSSDUG00000022611	rbm38	98	66.275	ENSACIG00000012502	-	100	84.615	Amphilophus_citrinellus
ENSSDUG00000022611	rbm38	100	93.200	ENSACIG00000000010	rbm38	100	93.200	Amphilophus_citrinellus
ENSSDUG00000022611	rbm38	95	67.500	ENSAOCG00000012559	RBM38	98	67.500	Amphiprion_ocellaris
ENSSDUG00000022611	rbm38	100	96.000	ENSAOCG00000013497	-	100	96.000	Amphiprion_ocellaris
ENSSDUG00000022611	rbm38	98	66.270	ENSAPEG00000023581	-	100	66.270	Amphiprion_percula
ENSSDUG00000022611	rbm38	100	96.000	ENSAPEG00000013137	rbm38	100	96.000	Amphiprion_percula
ENSSDUG00000022611	rbm38	98	67.460	ENSATEG00000016710	-	100	67.451	Anabas_testudineus
ENSSDUG00000022611	rbm38	100	92.000	ENSATEG00000016366	rbm38	100	92.000	Anabas_testudineus
ENSSDUG00000022611	rbm38	93	57.563	ENSACAG00000016238	RBM38	90	57.563	Anolis_carolinensis
ENSSDUG00000022611	rbm38	93	60.084	ENSANAG00000031959	RBM38	81	85.859	Aotus_nancymaae
ENSSDUG00000022611	rbm38	98	65.490	ENSACLG00000019514	-	100	65.490	Astatotilapia_calliptera
ENSSDUG00000022611	rbm38	98	63.200	ENSAMXG00000015601	-	100	63.200	Astyanax_mexicanus
ENSSDUG00000022611	rbm38	95	57.983	ENSAMXG00000038120	rbm38	96	57.983	Astyanax_mexicanus
ENSSDUG00000022611	rbm38	91	60.515	ENSBTAG00000008105	RBM38	89	60.515	Bos_taurus
ENSSDUG00000022611	rbm38	58	59.310	WBGene00006321	sup-12	68	71.569	Caenorhabditis_elegans
ENSSDUG00000022611	rbm38	91	59.657	ENSCJAG00000019139	RBM38	81	85.859	Callithrix_jacchus
ENSSDUG00000022611	rbm38	91	60.515	ENSCAFG00020021943	RBM38	89	60.515	Canis_lupus_dingo
ENSSDUG00000022611	rbm38	91	59.227	ENSCHIG00000002609	RBM38	89	59.227	Capra_hircus
ENSSDUG00000022611	rbm38	91	60.515	ENSCPOG00000012781	RBM38	89	60.515	Cavia_porcellus
ENSSDUG00000022611	rbm38	91	59.657	ENSCCAG00000036872	RBM38	81	85.859	Cebus_capucinus
ENSSDUG00000022611	rbm38	91	60.515	ENSCATG00000032133	RBM38	81	85.859	Cercocebus_atys
ENSSDUG00000022611	rbm38	91	60.086	ENSCLAG00000005906	RBM38	92	60.086	Chinchilla_lanigera
ENSSDUG00000022611	rbm38	91	60.515	ENSCSAG00000015503	RBM38	89	60.515	Chlorocebus_sabaeus
ENSSDUG00000022611	rbm38	93	60.084	ENSCPBG00000024059	RBM38	100	60.084	Chrysemys_picta_bellii
ENSSDUG00000022611	rbm38	61	62.581	ENSCSAVG00000001132	-	58	62.581	Ciona_savignyi
ENSSDUG00000022611	rbm38	94	46.835	ENSCANG00000030105	-	80	46.835	Colobus_angolensis_palliatus
ENSSDUG00000022611	rbm38	72	66.667	ENSCGRG00001012928	Rbm38	89	59.657	Cricetulus_griseus_chok1gshd
ENSSDUG00000022611	rbm38	98	65.079	ENSCSEG00000004701	-	100	65.873	Cynoglossus_semilaevis
ENSSDUG00000022611	rbm38	84	68.900	ENSCSEG00000020943	rbm38	68	68.900	Cynoglossus_semilaevis
ENSSDUG00000022611	rbm38	100	84.400	ENSCVAG00000015952	rbm38	100	84.400	Cyprinodon_variegatus
ENSSDUG00000022611	rbm38	98	64.286	ENSCVAG00000005472	-	100	65.476	Cyprinodon_variegatus
ENSSDUG00000022611	rbm38	98	64.777	ENSDARG00000058818	rbm38	100	64.777	Danio_rerio
ENSSDUG00000022611	rbm38	93	58.051	ENSDNOG00000032004	RBM38	100	58.051	Dasypus_novemcinctus
ENSSDUG00000022611	rbm38	91	59.657	ENSECAG00000007700	RBM38	89	59.657	Equus_caballus
ENSSDUG00000022611	rbm38	91	58.120	ENSEEUG00000013489	RBM38	89	58.974	Erinaceus_europaeus
ENSSDUG00000022611	rbm38	98	67.059	ENSELUG00000005849	-	100	67.059	Esox_lucius
ENSSDUG00000022611	rbm38	92	71.739	ENSELUG00000000585	-	100	71.739	Esox_lucius
ENSSDUG00000022611	rbm38	74	65.957	ENSFCAG00000042916	RBM38	80	85.714	Felis_catus
ENSSDUG00000022611	rbm38	70	68.927	ENSFALG00000010805	RBM38	90	68.927	Ficedula_albicollis
ENSSDUG00000022611	rbm38	98	64.683	ENSFHEG00000006160	-	100	64.113	Fundulus_heteroclitus
ENSSDUG00000022611	rbm38	100	87.251	ENSFHEG00000017748	rbm38	100	87.251	Fundulus_heteroclitus
ENSSDUG00000022611	rbm38	75	72.251	ENSGMOG00000016655	-	100	74.346	Gadus_morhua
ENSSDUG00000022611	rbm38	93	58.228	ENSGALG00000026081	RBM38	100	58.824	Gallus_gallus
ENSSDUG00000022611	rbm38	93	65.546	ENSGACG00000009873	-	100	65.546	Gasterosteus_aculeatus
ENSSDUG00000022611	rbm38	93	83.262	ENSGACG00000015224	rbm38	100	83.262	Gasterosteus_aculeatus
ENSSDUG00000022611	rbm38	93	60.338	ENSGAGG00000001187	RBM38	100	60.338	Gopherus_agassizii
ENSSDUG00000022611	rbm38	100	93.600	ENSHBUG00000012058	rbm38	100	93.600	Haplochromis_burtoni
ENSSDUG00000022611	rbm38	98	65.737	ENSHBUG00000011778	-	100	65.737	Haplochromis_burtoni
ENSSDUG00000022611	rbm38	91	59.657	ENSHGLG00000015077	RBM38	89	59.657	Heterocephalus_glaber_female
ENSSDUG00000022611	rbm38	81	72.059	ENSHCOG00000005622	-	57	72.906	Hippocampus_comes
ENSSDUG00000022611	rbm38	100	63.745	ENSHCOG00000019040	rbm38	100	63.745	Hippocampus_comes
ENSSDUG00000022611	rbm38	98	60.400	ENSIPUG00000019349	-	100	60.400	Ictalurus_punctatus
ENSSDUG00000022611	rbm38	91	74.468	ENSKMAG00000012402	rbm38	99	74.468	Kryptolebias_marmoratus
ENSSDUG00000022611	rbm38	100	92.800	ENSLBEG00000018878	rbm38	100	92.800	Labrus_bergylta
ENSSDUG00000022611	rbm38	98	65.737	ENSLBEG00000016163	RBM38	100	66.148	Labrus_bergylta
ENSSDUG00000022611	rbm38	98	66.532	ENSLOCG00000003456	rbm38	100	66.532	Lepisosteus_oculatus
ENSSDUG00000022611	rbm38	91	60.515	ENSMFAG00000043808	RBM38	81	85.859	Macaca_fascicularis
ENSSDUG00000022611	rbm38	91	60.515	ENSMMUG00000031391	RBM38	81	85.859	Macaca_mulatta
ENSSDUG00000022611	rbm38	91	60.515	ENSMNEG00000034683	RBM38	81	85.859	Macaca_nemestrina
ENSSDUG00000022611	rbm38	100	95.600	ENSMAMG00000024135	rbm38	100	95.600	Mastacembelus_armatus
ENSSDUG00000022611	rbm38	98	68.924	ENSMAMG00000020499	RBM38	100	68.898	Mastacembelus_armatus
ENSSDUG00000022611	rbm38	98	65.737	ENSMZEG00005000849	-	100	65.737	Maylandia_zebra
ENSSDUG00000022611	rbm38	100	93.600	ENSMZEG00005026036	rbm38	100	93.600	Maylandia_zebra
ENSSDUG00000022611	rbm38	72	67.213	ENSMAUG00000021211	Rbm38	89	60.515	Mesocricetus_auratus
ENSSDUG00000022611	rbm38	93	58.824	ENSMICG00000038011	RBM38	100	58.824	Microcebus_murinus
ENSSDUG00000022611	rbm38	72	67.213	ENSMOCG00000008715	Rbm38	89	60.515	Microtus_ochrogaster
ENSSDUG00000022611	rbm38	98	65.873	ENSMMOG00000020051	-	100	66.403	Mola_mola
ENSSDUG00000022611	rbm38	95	57.851	ENSMODG00000016458	RBM38	94	58.678	Monodelphis_domestica
ENSSDUG00000022611	rbm38	100	77.200	ENSMALG00000022327	rbm38	100	78.000	Monopterus_albus
ENSSDUG00000022611	rbm38	75	76.842	ENSMALG00000004680	RBM38	71	76.842	Monopterus_albus
ENSSDUG00000022611	rbm38	91	59.657	MGP_CAROLIEiJ_G0024745	Rbm38	89	59.657	Mus_caroli
ENSSDUG00000022611	rbm38	91	59.657	ENSMUSG00000027510	Rbm38	89	59.657	Mus_musculus
ENSSDUG00000022611	rbm38	91	59.657	MGP_PahariEiJ_G0026186	Rbm38	89	59.657	Mus_pahari
ENSSDUG00000022611	rbm38	91	59.657	MGP_SPRETEiJ_G0025665	Rbm38	89	59.657	Mus_spretus
ENSSDUG00000022611	rbm38	74	66.489	ENSMPUG00000006518	RBM38	98	64.390	Mustela_putorius_furo
ENSSDUG00000022611	rbm38	91	58.798	ENSMLUG00000011140	RBM38	98	58.798	Myotis_lucifugus
ENSSDUG00000022611	rbm38	98	65.490	ENSNBRG00000022545	-	100	65.490	Neolamprologus_brichardi
ENSSDUG00000022611	rbm38	100	93.200	ENSNBRG00000022685	rbm38	100	93.200	Neolamprologus_brichardi
ENSSDUG00000022611	rbm38	91	60.944	ENSODEG00000007980	RBM38	89	60.944	Octodon_degus
ENSSDUG00000022611	rbm38	98	93.878	ENSONIG00000017073	rbm38	100	93.878	Oreochromis_niloticus
ENSSDUG00000022611	rbm38	98	65.354	ENSONIG00000020324	-	100	65.354	Oreochromis_niloticus
ENSSDUG00000022611	rbm38	91	57.082	ENSOANG00000009259	RBM38	81	58.190	Ornithorhynchus_anatinus
ENSSDUG00000022611	rbm38	98	62.992	ENSORLG00000027180	-	100	63.424	Oryzias_latipes
ENSSDUG00000022611	rbm38	100	84.064	ENSORLG00000012154	rbm38	100	84.064	Oryzias_latipes
ENSSDUG00000022611	rbm38	100	84.064	ENSORLG00020017871	rbm38	100	84.064	Oryzias_latipes_hni
ENSSDUG00000022611	rbm38	100	62.403	ENSORLG00020020751	-	100	63.424	Oryzias_latipes_hni
ENSSDUG00000022611	rbm38	98	63.745	ENSORLG00015017040	-	100	63.636	Oryzias_latipes_hsok
ENSSDUG00000022611	rbm38	100	84.064	ENSORLG00015012606	rbm38	100	84.064	Oryzias_latipes_hsok
ENSSDUG00000022611	rbm38	100	83.267	ENSOMEG00000006805	rbm38	100	83.267	Oryzias_melastigma
ENSSDUG00000022611	rbm38	98	64.286	ENSOMEG00000023912	-	100	64.286	Oryzias_melastigma
ENSSDUG00000022611	rbm38	91	60.515	ENSOGAG00000029136	RBM38	88	60.515	Otolemur_garnettii
ENSSDUG00000022611	rbm38	74	65.957	ENSPPRG00000009507	RBM38	80	85.714	Panthera_pardus
ENSSDUG00000022611	rbm38	50	80.000	ENSPTRG00000045845	-	68	80.000	Pan_troglodytes
ENSSDUG00000022611	rbm38	77	64.796	ENSPTRG00000013661	RBM38	81	85.859	Pan_troglodytes
ENSSDUG00000022611	rbm38	95	47.737	ENSPANG00000033127	-	93	47.737	Papio_anubis
ENSSDUG00000022611	rbm38	91	60.515	ENSPANG00000020919	-	81	85.859	Papio_anubis
ENSSDUG00000022611	rbm38	98	60.714	ENSPKIG00000025417	rbm38	100	62.891	Paramormyrops_kingsleyae
ENSSDUG00000022611	rbm38	98	61.508	ENSPKIG00000018122	-	100	81.197	Paramormyrops_kingsleyae
ENSSDUG00000022611	rbm38	93	59.494	ENSPSIG00000011649	RBM38	92	59.494	Pelodiscus_sinensis
ENSSDUG00000022611	rbm38	100	78.884	ENSPMGG00000011343	rbm38	100	81.673	Periophthalmus_magnuspinnatus
ENSSDUG00000022611	rbm38	98	62.205	ENSPMGG00000017094	-	100	62.205	Periophthalmus_magnuspinnatus
ENSSDUG00000022611	rbm38	95	59.091	ENSPCIG00000013648	RBM38	94	59.091	Phascolarctos_cinereus
ENSSDUG00000022611	rbm38	100	87.402	ENSPFOG00000011658	rbm38	100	87.402	Poecilia_formosa
ENSSDUG00000022611	rbm38	98	64.940	ENSPLAG00000002500	-	100	64.940	Poecilia_latipinna
ENSSDUG00000022611	rbm38	100	87.008	ENSPLAG00000005218	rbm38	100	87.008	Poecilia_latipinna
ENSSDUG00000022611	rbm38	100	87.795	ENSPMEG00000015770	rbm38	100	87.795	Poecilia_mexicana
ENSSDUG00000022611	rbm38	100	87.008	ENSPREG00000007398	rbm38	100	87.008	Poecilia_reticulata
ENSSDUG00000022611	rbm38	91	59.657	ENSPCOG00000026201	RBM38	84	83.495	Propithecus_coquereli
ENSSDUG00000022611	rbm38	75	40.838	ENSPVAG00000006457	RBM38	92	39.419	Pteropus_vampyrus
ENSSDUG00000022611	rbm38	98	65.490	ENSPNYG00000019727	-	100	84.615	Pundamilia_nyererei
ENSSDUG00000022611	rbm38	100	93.200	ENSPNYG00000021373	rbm38	100	93.200	Pundamilia_nyererei
ENSSDUG00000022611	rbm38	95	61.506	ENSPNAG00000010596	rbm38	96	61.506	Pygocentrus_nattereri
ENSSDUG00000022611	rbm38	98	63.200	ENSPNAG00000015123	-	91	82.203	Pygocentrus_nattereri
ENSSDUG00000022611	rbm38	91	60.515	ENSRNOG00000006420	Rbm38	89	60.515	Rattus_norvegicus
ENSSDUG00000022611	rbm38	93	51.489	ENSRROG00000036388	-	89	51.489	Rhinopithecus_roxellana
ENSSDUG00000022611	rbm38	91	58.798	ENSSBOG00000031053	RBM38	92	85.859	Saimiri_boliviensis_boliviensis
ENSSDUG00000022611	rbm38	98	58.000	ENSSFOG00015004453	rbm38	100	62.400	Scleropages_formosus
ENSSDUG00000022611	rbm38	100	100.000	ENSSLDG00000010845	rbm38	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000022611	rbm38	98	67.460	ENSSLDG00000011778	RBM38	100	67.843	Seriola_lalandi_dorsalis
ENSSDUG00000022611	rbm38	100	96.000	ENSSPAG00000011113	rbm38	100	96.000	Stegastes_partitus
ENSSDUG00000022611	rbm38	98	66.667	ENSSPAG00000020989	RBM38	100	66.667	Stegastes_partitus
ENSSDUG00000022611	rbm38	91	59.657	ENSSSCG00000007504	RBM38	89	59.657	Sus_scrofa
ENSSDUG00000022611	rbm38	100	86.000	ENSTRUG00000024954	rbm38	100	86.400	Takifugu_rubripes
ENSSDUG00000022611	rbm38	98	64.173	ENSTRUG00000019869	-	100	64.567	Takifugu_rubripes
ENSSDUG00000022611	rbm38	93	66.387	ENSTNIG00000007093	-	100	66.387	Tetraodon_nigroviridis
ENSSDUG00000022611	rbm38	74	65.957	ENSUAMG00000019780	RBM38	89	60.086	Ursus_americanus
ENSSDUG00000022611	rbm38	91	60.515	ENSVVUG00000017246	RBM38	89	60.515	Vulpes_vulpes
ENSSDUG00000022611	rbm38	77	64.615	ENSXETG00000011268	rbm38	99	58.091	Xenopus_tropicalis
ENSSDUG00000022611	rbm38	52	75.735	ENSXCOG00000017324	-	62	75.735	Xiphophorus_couchianus
ENSSDUG00000022611	rbm38	100	88.400	ENSXMAG00000023662	rbm38	100	88.400	Xiphophorus_maculatus