EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000022635 (Gene tree)
Gene ID: 111229903
Gene Symbol: cnot4a
Alias: si:dkey-230e6.2
Full Name: CCR4-NOT transcription complex subunit 4-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 11504 bases
Position: chrBDQW01000242.1:2530089-2541592
Accession: 111229903
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000031486	RRM_1	PF00076.22	6.4e-05	1	1
ENSSDUP00000031479	RRM_1	PF00076.22	7.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000032022	-	5122	XM_022756431	ENSSDUP00000031479	796 (aa)	XP_022612152	UPI000BBE4F4D
ENSSDUT00000032029	-	2184	-	ENSSDUP00000031486	727 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000022635's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022635's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000022635	cnot4a	81	93.284	ENSSDUG00000018585	cnot4b	99	93.284

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022635	cnot4a	91	90.566	ENSG00000080802	CNOT4	99	90.566	Homo_sapiens
ENSSDUG00000022635	cnot4a	94	100.000	ENSAPOG00000016272	cnot4a	98	100.000	Acanthochromis_polyacanthus
ENSSDUG00000022635	cnot4a	92	86.937	ENSAMEG00000012081	CNOT4	90	89.299	Ailuropoda_melanoleuca
ENSSDUG00000022635	cnot4a	100	100.000	ENSACIG00000003011	cnot4a	100	95.113	Amphilophus_citrinellus
ENSSDUG00000022635	cnot4a	100	99.630	ENSAOCG00000010792	cnot4a	100	99.630	Amphiprion_ocellaris
ENSSDUG00000022635	cnot4a	100	99.630	ENSAPEG00000004680	cnot4a	100	99.630	Amphiprion_percula
ENSSDUG00000022635	cnot4a	100	99.630	ENSATEG00000017580	cnot4a	100	99.630	Anabas_testudineus
ENSSDUG00000022635	cnot4a	100	70.247	ENSAPLG00000016441	CNOT4	100	70.123	Anas_platyrhynchos
ENSSDUG00000022635	cnot4a	100	70.284	ENSACAG00000011154	CNOT4	100	69.877	Anolis_carolinensis
ENSSDUG00000022635	cnot4a	91	90.566	ENSANAG00000032156	CNOT4	99	90.566	Aotus_nancymaae
ENSSDUG00000022635	cnot4a	100	100.000	ENSACLG00000002514	cnot4a	100	100.000	Astatotilapia_calliptera
ENSSDUG00000022635	cnot4a	87	92.222	ENSAMXG00000011473	cnot4b	100	92.222	Astyanax_mexicanus
ENSSDUG00000022635	cnot4a	85	95.185	ENSAMXG00000001373	cnot4a	100	95.185	Astyanax_mexicanus
ENSSDUG00000022635	cnot4a	92	89.299	ENSBTAG00000017919	CNOT4	99	89.299	Bos_taurus
ENSSDUG00000022635	cnot4a	91	90.566	ENSCJAG00000012532	CNOT4	99	90.566	Callithrix_jacchus
ENSSDUG00000022635	cnot4a	91	90.566	ENSCAFG00000003223	CNOT4	99	90.566	Canis_familiaris
ENSSDUG00000022635	cnot4a	88	90.566	ENSCAFG00020000093	CNOT4	99	90.566	Canis_lupus_dingo
ENSSDUG00000022635	cnot4a	92	89.299	ENSCHIG00000010955	CNOT4	99	90.566	Capra_hircus
ENSSDUG00000022635	cnot4a	91	90.566	ENSTSYG00000000893	CNOT4	99	90.566	Carlito_syrichta
ENSSDUG00000022635	cnot4a	91	90.189	ENSCAPG00000006213	CNOT4	99	90.189	Cavia_aperea
ENSSDUG00000022635	cnot4a	91	90.566	ENSCPOG00000011526	CNOT4	99	90.566	Cavia_porcellus
ENSSDUG00000022635	cnot4a	92	89.299	ENSCCAG00000024414	CNOT4	94	94.323	Cebus_capucinus
ENSSDUG00000022635	cnot4a	92	89.299	ENSCATG00000022607	CNOT4	99	89.299	Cercocebus_atys
ENSSDUG00000022635	cnot4a	91	90.566	ENSCLAG00000001857	CNOT4	99	90.566	Chinchilla_lanigera
ENSSDUG00000022635	cnot4a	91	90.566	ENSCSAG00000009096	CNOT4	99	90.566	Chlorocebus_sabaeus
ENSSDUG00000022635	cnot4a	68	93.583	ENSCHOG00000010412	CNOT4	67	93.583	Choloepus_hoffmanni
ENSSDUG00000022635	cnot4a	91	89.299	ENSCPBG00000004959	CNOT4	99	89.299	Chrysemys_picta_bellii
ENSSDUG00000022635	cnot4a	62	68.699	ENSCING00000004364	-	61	68.699	Ciona_intestinalis
ENSSDUG00000022635	cnot4a	92	89.299	ENSCANG00000029319	CNOT4	99	89.299	Colobus_angolensis_palliatus
ENSSDUG00000022635	cnot4a	91	90.566	ENSCGRG00001014651	Cnot4	99	90.566	Cricetulus_griseus_chok1gshd
ENSSDUG00000022635	cnot4a	91	90.566	ENSCGRG00000005727	Cnot4	99	90.566	Cricetulus_griseus_crigri
ENSSDUG00000022635	cnot4a	95	100.000	ENSCSEG00000015080	cnot4a	94	100.000	Cynoglossus_semilaevis
ENSSDUG00000022635	cnot4a	100	98.148	ENSCVAG00000009399	cnot4a	100	97.080	Cyprinodon_variegatus
ENSSDUG00000022635	cnot4a	100	92.251	ENSDARG00000007639	cnot4b	93	89.964	Danio_rerio
ENSSDUG00000022635	cnot4a	100	78.207	ENSDARG00000007045	cnot4a	100	78.829	Danio_rerio
ENSSDUG00000022635	cnot4a	92	89.299	ENSDNOG00000009409	CNOT4	99	89.299	Dasypus_novemcinctus
ENSSDUG00000022635	cnot4a	91	90.566	ENSDORG00000012268	Cnot4	99	90.566	Dipodomys_ordii
ENSSDUG00000022635	cnot4a	92	84.133	ENSETEG00000013407	CNOT4	93	84.133	Echinops_telfairi
ENSSDUG00000022635	cnot4a	89	89.299	ENSEASG00005014430	CNOT4	99	89.299	Equus_asinus_asinus
ENSSDUG00000022635	cnot4a	92	89.299	ENSECAG00000020262	CNOT4	99	89.299	Equus_caballus
ENSSDUG00000022635	cnot4a	99	94.545	ENSELUG00000008742	cnot4a	100	95.572	Esox_lucius
ENSSDUG00000022635	cnot4a	95	92.075	ENSELUG00000011540	cnot4b	95	90.741	Esox_lucius
ENSSDUG00000022635	cnot4a	91	90.566	ENSFCAG00000011904	CNOT4	99	90.566	Felis_catus
ENSSDUG00000022635	cnot4a	100	70.494	ENSFALG00000011194	CNOT4	100	70.247	Ficedula_albicollis
ENSSDUG00000022635	cnot4a	91	90.566	ENSFDAG00000013525	CNOT4	99	90.566	Fukomys_damarensis
ENSSDUG00000022635	cnot4a	100	99.259	ENSFHEG00000006608	cnot4a	100	97.482	Fundulus_heteroclitus
ENSSDUG00000022635	cnot4a	96	77.806	ENSGMOG00000001329	cnot4a	100	78.580	Gadus_morhua
ENSSDUG00000022635	cnot4a	92	89.299	ENSGALG00000011682	CNOT4	99	89.299	Gallus_gallus
ENSSDUG00000022635	cnot4a	100	98.889	ENSGACG00000004276	cnot4a	100	98.889	Gasterosteus_aculeatus
ENSSDUG00000022635	cnot4a	91	89.299	ENSGAGG00000017331	CNOT4	99	89.299	Gopherus_agassizii
ENSSDUG00000022635	cnot4a	84	90.047	ENSGGOG00000000142	CNOT4	98	90.047	Gorilla_gorilla
ENSSDUG00000022635	cnot4a	100	100.000	ENSHBUG00000000027	cnot4a	100	100.000	Haplochromis_burtoni
ENSSDUG00000022635	cnot4a	91	90.566	ENSHGLG00000011533	CNOT4	99	90.566	Heterocephalus_glaber_female
ENSSDUG00000022635	cnot4a	68	89.299	ENSHGLG00100013058	CNOT4	94	89.299	Heterocephalus_glaber_male
ENSSDUG00000022635	cnot4a	99	98.148	ENSHCOG00000015815	cnot4a	100	98.148	Hippocampus_comes
ENSSDUG00000022635	cnot4a	87	92.222	ENSIPUG00000016994	cnot4b	100	92.222	Ictalurus_punctatus
ENSSDUG00000022635	cnot4a	100	86.424	ENSIPUG00000006393	cnot4	100	94.444	Ictalurus_punctatus
ENSSDUG00000022635	cnot4a	91	90.566	ENSSTOG00000007717	CNOT4	99	90.566	Ictidomys_tridecemlineatus
ENSSDUG00000022635	cnot4a	91	90.566	ENSJJAG00000016618	Cnot4	99	90.566	Jaculus_jaculus
ENSSDUG00000022635	cnot4a	68	87.037	ENSJJAG00000019991	-	93	88.302	Jaculus_jaculus
ENSSDUG00000022635	cnot4a	94	98.519	ENSKMAG00000004581	cnot4a	100	97.445	Kryptolebias_marmoratus
ENSSDUG00000022635	cnot4a	100	99.259	ENSLBEG00000009999	cnot4a	100	95.985	Labrus_bergylta
ENSSDUG00000022635	cnot4a	100	71.481	ENSLACG00000002647	CNOT4	99	72.546	Latimeria_chalumnae
ENSSDUG00000022635	cnot4a	100	91.575	ENSLOCG00000016126	cnot4a	92	91.575	Lepisosteus_oculatus
ENSSDUG00000022635	cnot4a	92	89.299	ENSLAFG00000000709	CNOT4	99	89.299	Loxodonta_africana
ENSSDUG00000022635	cnot4a	91	90.566	ENSMFAG00000046349	CNOT4	99	90.566	Macaca_fascicularis
ENSSDUG00000022635	cnot4a	92	89.299	ENSMMUG00000016181	CNOT4	99	89.299	Macaca_mulatta
ENSSDUG00000022635	cnot4a	92	89.299	ENSMNEG00000042164	CNOT4	99	90.566	Macaca_nemestrina
ENSSDUG00000022635	cnot4a	92	89.299	ENSMLEG00000032709	CNOT4	99	89.299	Mandrillus_leucophaeus
ENSSDUG00000022635	cnot4a	100	100.000	ENSMAMG00000023194	cnot4a	100	100.000	Mastacembelus_armatus
ENSSDUG00000022635	cnot4a	100	100.000	ENSMZEG00005007312	cnot4a	100	96.241	Maylandia_zebra
ENSSDUG00000022635	cnot4a	100	70.000	ENSMGAG00000011788	CNOT4	100	69.877	Meleagris_gallopavo
ENSSDUG00000022635	cnot4a	91	90.566	ENSMAUG00000020415	Cnot4	99	90.566	Mesocricetus_auratus
ENSSDUG00000022635	cnot4a	92	89.299	ENSMICG00000001667	CNOT4	99	89.299	Microcebus_murinus
ENSSDUG00000022635	cnot4a	91	90.566	ENSMOCG00000020955	Cnot4	99	90.566	Microtus_ochrogaster
ENSSDUG00000022635	cnot4a	76	98.889	ENSMMOG00000014565	cnot4a	95	98.889	Mola_mola
ENSSDUG00000022635	cnot4a	91	90.566	ENSMODG00000014068	CNOT4	99	90.566	Monodelphis_domestica
ENSSDUG00000022635	cnot4a	94	98.889	ENSMALG00000011662	cnot4a	89	95.467	Monopterus_albus
ENSSDUG00000022635	cnot4a	91	90.566	MGP_CAROLIEiJ_G0028217	Cnot4	99	90.566	Mus_caroli
ENSSDUG00000022635	cnot4a	91	90.566	ENSMUSG00000038784	Cnot4	99	90.566	Mus_musculus
ENSSDUG00000022635	cnot4a	91	90.566	MGP_PahariEiJ_G0021974	Cnot4	99	90.566	Mus_pahari
ENSSDUG00000022635	cnot4a	91	90.566	MGP_SPRETEiJ_G0029216	Cnot4	99	90.566	Mus_spretus
ENSSDUG00000022635	cnot4a	91	90.566	ENSMPUG00000004089	CNOT4	99	90.566	Mustela_putorius_furo
ENSSDUG00000022635	cnot4a	89	89.299	ENSMLUG00000008260	CNOT4	99	89.299	Myotis_lucifugus
ENSSDUG00000022635	cnot4a	91	90.566	ENSNGAG00000015030	Cnot4	99	90.566	Nannospalax_galili
ENSSDUG00000022635	cnot4a	92	93.694	ENSNBRG00000021144	cnot4a	100	93.704	Neolamprologus_brichardi
ENSSDUG00000022635	cnot4a	92	88.930	ENSNLEG00000013352	CNOT4	99	88.930	Nomascus_leucogenys
ENSSDUG00000022635	cnot4a	86	67.965	ENSOPRG00000001023	CNOT4	81	67.965	Ochotona_princeps
ENSSDUG00000022635	cnot4a	91	90.566	ENSODEG00000012975	CNOT4	99	90.566	Octodon_degus
ENSSDUG00000022635	cnot4a	100	100.000	ENSONIG00000008656	cnot4a	100	96.241	Oreochromis_niloticus
ENSSDUG00000022635	cnot4a	91	90.566	ENSOANG00000005006	CNOT4	99	90.566	Ornithorhynchus_anatinus
ENSSDUG00000022635	cnot4a	91	90.566	ENSOCUG00000013448	CNOT4	99	90.566	Oryctolagus_cuniculus
ENSSDUG00000022635	cnot4a	100	91.479	ENSORLG00000003727	cnot4a	100	97.080	Oryzias_latipes
ENSSDUG00000022635	cnot4a	100	91.092	ENSORLG00020015684	cnot4a	100	90.590	Oryzias_latipes_hni
ENSSDUG00000022635	cnot4a	100	91.353	ENSORLG00015008470	cnot4a	100	91.353	Oryzias_latipes_hsok
ENSSDUG00000022635	cnot4a	100	91.364	ENSOMEG00000011084	cnot4a	100	97.445	Oryzias_melastigma
ENSSDUG00000022635	cnot4a	92	89.299	ENSOGAG00000015499	CNOT4	99	89.299	Otolemur_garnettii
ENSSDUG00000022635	cnot4a	92	89.299	ENSOARG00000008803	CNOT4	99	89.299	Ovis_aries
ENSSDUG00000022635	cnot4a	92	89.299	ENSPPAG00000041937	CNOT4	99	89.299	Pan_paniscus
ENSSDUG00000022635	cnot4a	92	89.299	ENSPPRG00000023940	CNOT4	99	89.299	Panthera_pardus
ENSSDUG00000022635	cnot4a	91	90.566	ENSPTIG00000016601	CNOT4	99	90.566	Panthera_tigris_altaica
ENSSDUG00000022635	cnot4a	92	89.299	ENSPTRG00000019727	CNOT4	99	89.299	Pan_troglodytes
ENSSDUG00000022635	cnot4a	92	89.299	ENSPANG00000017724	CNOT4	99	89.299	Papio_anubis
ENSSDUG00000022635	cnot4a	100	86.316	ENSPKIG00000018137	cnot4a	100	90.000	Paramormyrops_kingsleyae
ENSSDUG00000022635	cnot4a	100	70.037	ENSPSIG00000011256	CNOT4	100	69.790	Pelodiscus_sinensis
ENSSDUG00000022635	cnot4a	92	91.021	ENSPMGG00000005671	cnot4a	100	97.037	Periophthalmus_magnuspinnatus
ENSSDUG00000022635	cnot4a	91	90.566	ENSPEMG00000021566	Cnot4	99	90.566	Peromyscus_maniculatus_bairdii
ENSSDUG00000022635	cnot4a	91	90.566	ENSPCIG00000029622	CNOT4	95	90.566	Phascolarctos_cinereus
ENSSDUG00000022635	cnot4a	100	99.259	ENSPFOG00000002228	cnot4a	100	92.528	Poecilia_formosa
ENSSDUG00000022635	cnot4a	100	99.259	ENSPLAG00000001780	cnot4a	100	98.175	Poecilia_latipinna
ENSSDUG00000022635	cnot4a	100	99.259	ENSPMEG00000006852	cnot4a	100	98.175	Poecilia_mexicana
ENSSDUG00000022635	cnot4a	100	99.259	ENSPREG00000008171	cnot4a	100	96.043	Poecilia_reticulata
ENSSDUG00000022635	cnot4a	91	90.566	ENSPPYG00000018026	CNOT4	99	90.566	Pongo_abelii
ENSSDUG00000022635	cnot4a	92	89.299	ENSPCOG00000019907	CNOT4	99	89.299	Propithecus_coquereli
ENSSDUG00000022635	cnot4a	86	89.299	ENSPVAG00000004905	CNOT4	92	89.299	Pteropus_vampyrus
ENSSDUG00000022635	cnot4a	100	100.000	ENSPNYG00000004276	cnot4a	100	96.241	Pundamilia_nyererei
ENSSDUG00000022635	cnot4a	100	92.620	ENSPNAG00000008679	cnot4b	100	92.593	Pygocentrus_nattereri
ENSSDUG00000022635	cnot4a	100	86.755	ENSPNAG00000020433	cnot4a	100	94.444	Pygocentrus_nattereri
ENSSDUG00000022635	cnot4a	91	90.566	ENSRNOG00000010795	Cnot4	99	90.566	Rattus_norvegicus
ENSSDUG00000022635	cnot4a	92	89.299	ENSRBIG00000043977	CNOT4	99	89.299	Rhinopithecus_bieti
ENSSDUG00000022635	cnot4a	91	90.566	ENSSBOG00000020808	CNOT4	99	90.566	Saimiri_boliviensis_boliviensis
ENSSDUG00000022635	cnot4a	91	90.566	ENSSHAG00000013639	CNOT4	99	90.566	Sarcophilus_harrisii
ENSSDUG00000022635	cnot4a	88	91.538	ENSSFOG00015002019	cnot4a	100	91.481	Scleropages_formosus
ENSSDUG00000022635	cnot4a	100	91.756	ENSSFOG00015017285	CNOT4	100	93.066	Scleropages_formosus
ENSSDUG00000022635	cnot4a	100	100.000	ENSSMAG00000008614	cnot4a	100	100.000	Scophthalmus_maximus
ENSSDUG00000022635	cnot4a	100	100.000	ENSSLDG00000015770	cnot4a	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000022635	cnot4a	100	62.561	ENSSLDG00000014347	cnot4b	100	63.715	Seriola_lalandi_dorsalis
ENSSDUG00000022635	cnot4a	89	89.299	ENSSPUG00000004677	CNOT4	99	89.299	Sphenodon_punctatus
ENSSDUG00000022635	cnot4a	100	100.000	ENSSPAG00000012329	cnot4a	100	100.000	Stegastes_partitus
ENSSDUG00000022635	cnot4a	92	89.299	ENSSSCG00000021354	CNOT4	98	90.566	Sus_scrofa
ENSSDUG00000022635	cnot4a	100	70.370	ENSTGUG00000009161	CNOT4	100	70.247	Taeniopygia_guttata
ENSSDUG00000022635	cnot4a	100	98.519	ENSTRUG00000016861	cnot4a	100	98.519	Takifugu_rubripes
ENSSDUG00000022635	cnot4a	100	89.466	ENSTNIG00000016000	cnot4a	99	91.882	Tetraodon_nigroviridis
ENSSDUG00000022635	cnot4a	86	84.871	ENSTBEG00000002202	CNOT4	88	83.764	Tupaia_belangeri
ENSSDUG00000022635	cnot4a	86	89.299	ENSTTRG00000005122	CNOT4	90	89.299	Tursiops_truncatus
ENSSDUG00000022635	cnot4a	89	89.299	ENSUAMG00000026759	CNOT4	99	89.299	Ursus_americanus
ENSSDUG00000022635	cnot4a	91	89.299	ENSUMAG00000015351	CNOT4	95	89.299	Ursus_maritimus
ENSSDUG00000022635	cnot4a	92	89.299	ENSVVUG00000006200	CNOT4	99	90.566	Vulpes_vulpes
ENSSDUG00000022635	cnot4a	96	89.259	ENSXETG00000010594	cnot4	89	89.259	Xenopus_tropicalis
ENSSDUG00000022635	cnot4a	79	97.810	ENSXCOG00000020824	cnot4a	98	97.810	Xiphophorus_couchianus
ENSSDUG00000022635	cnot4a	100	98.519	ENSXMAG00000016984	cnot4a	100	97.445	Xiphophorus_maculatus