EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000022640 (Gene tree)
Gene ID: 111217629
Gene Symbol: arl5c
Alias: zgc:77751
Full Name: ADP-ribosylation factor-like protein 5B
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 4108 bases
Position: chrBDQW01000044.1:4988150-4992257
Accession: 111217629
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000031484	MMR_HSR1	PF01926.23	3e-07	1	1
ENSSDUP00000031483	MMR_HSR1	PF01926.23	3.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000032027	-	1754	-	ENSSDUP00000031484	173 (aa)	-	-
ENSSDUT00000032026	-	1967	XM_022739587	ENSSDUP00000031483	179 (aa)	XP_022595308	UPI000BBF3868

Gene Model

Click here to download ENSSDUG00000022640's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022640's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000022640	arl5c	94	37.654	ENSSDUG00000003943	arl3l2	88	37.195
ENSSDUG00000022640	arl5c	92	41.916	ENSSDUG00000012868	arl4cb	86	41.916
ENSSDUG00000022640	arl5c	99	42.135	ENSSDUG00000020599	-	99	42.135
ENSSDUG00000022640	arl5c	98	70.455	ENSSDUG00000012261	arl5a	98	70.455
ENSSDUG00000022640	arl5c	60	39.286	ENSSDUG00000023723	-	100	39.286
ENSSDUG00000022640	arl5c	86	44.966	ENSSDUG00000004422	arl11	88	44.966
ENSSDUG00000022640	arl5c	98	44.633	ENSSDUG00000013041	-	98	44.633
ENSSDUG00000022640	arl5c	97	40.782	ENSSDUG00000013427	-	98	40.782
ENSSDUG00000022640	arl5c	92	41.566	ENSSDUG00000011151	-	83	41.566
ENSSDUG00000022640	arl5c	67	30.400	ENSSDUG00000004950	rab35b	61	30.400
ENSSDUG00000022640	arl5c	98	42.373	ENSSDUG00000005105	arf5	98	42.373
ENSSDUG00000022640	arl5c	89	41.250	ENSSDUG00000010935	arl4d	80	41.250
ENSSDUG00000022640	arl5c	94	39.877	ENSSDUG00000021397	arl2	97	40.000
ENSSDUG00000022640	arl5c	98	45.455	ENSSDUG00000017254	-	98	45.455
ENSSDUG00000022640	arl5c	51	37.079	ENSSDUG00000010773	sar1ab	64	37.079
ENSSDUG00000022640	arl5c	98	69.143	ENSSDUG00000007515	ARL5B	98	69.143
ENSSDUG00000022640	arl5c	92	40.606	ENSSDUG00000000586	arl4aa	83	40.606
ENSSDUG00000022640	arl5c	51	35.955	ENSSDUG00000020926	sar1b	74	34.783
ENSSDUG00000022640	arl5c	93	47.205	ENSSDUG00000007780	arf2b	93	46.707
ENSSDUG00000022640	arl5c	95	39.655	ENSSDUG00000007121	arfrp1	89	39.106
ENSSDUG00000022640	arl5c	51	38.202	ENSSDUG00000019629	-	71	36.957
ENSSDUG00000022640	arl5c	88	41.875	ENSSDUG00000017586	-	79	41.875
ENSSDUG00000022640	arl5c	86	32.571	ENSSDUG00000006652	ARL6	82	32.468
ENSSDUG00000022640	arl5c	91	44.444	ENSSDUG00000013898	arl1	92	44.444
ENSSDUG00000022640	arl5c	100	40.000	ENSSDUG00000014675	-	100	40.000
ENSSDUG00000022640	arl5c	98	47.159	ENSSDUG00000017356	-	98	47.159
ENSSDUG00000022640	arl5c	98	44.633	ENSSDUG00000007524	arf3b	96	44.633
ENSSDUG00000022640	arl5c	99	39.106	ENSSDUG00000013976	arl3	98	39.106
ENSSDUG00000022640	arl5c	96	39.306	ENSSDUG00000004762	-	95	39.306

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022640	arl5c	100	86.592	ENSAPOG00000005821	arl5c	100	86.592	Acanthochromis_polyacanthus
ENSSDUG00000022640	arl5c	95	88.415	ENSACIG00000008975	arl5c	91	88.415	Amphilophus_citrinellus
ENSSDUG00000022640	arl5c	100	87.709	ENSAOCG00000010448	arl5c	100	87.709	Amphiprion_ocellaris
ENSSDUG00000022640	arl5c	100	87.709	ENSAPEG00000002699	arl5c	100	87.709	Amphiprion_percula
ENSSDUG00000022640	arl5c	100	84.916	ENSATEG00000000181	arl5c	100	84.916	Anabas_testudineus
ENSSDUG00000022640	arl5c	100	87.709	ENSACLG00000000922	arl5c	100	87.709	Astatotilapia_calliptera
ENSSDUG00000022640	arl5c	100	83.240	ENSAMXG00000031771	arl5c	100	83.240	Astyanax_mexicanus
ENSSDUG00000022640	arl5c	100	86.034	ENSCSEG00000009845	arl5c	100	86.034	Cynoglossus_semilaevis
ENSSDUG00000022640	arl5c	100	86.592	ENSCVAG00000012706	arl5c	100	86.592	Cyprinodon_variegatus
ENSSDUG00000022640	arl5c	100	82.682	ENSDARG00000035719	arl5c	100	82.682	Danio_rerio
ENSSDUG00000022640	arl5c	100	83.799	ENSELUG00000016864	arl5c	100	83.799	Esox_lucius
ENSSDUG00000022640	arl5c	100	87.151	ENSFHEG00000013677	arl5c	100	87.151	Fundulus_heteroclitus
ENSSDUG00000022640	arl5c	100	86.592	ENSGAFG00000002547	arl5c	100	86.592	Gambusia_affinis
ENSSDUG00000022640	arl5c	100	88.268	ENSGACG00000009321	arl5c	100	88.268	Gasterosteus_aculeatus
ENSSDUG00000022640	arl5c	100	87.709	ENSHBUG00000007301	arl5c	100	87.709	Haplochromis_burtoni
ENSSDUG00000022640	arl5c	100	81.564	ENSHCOG00000017576	-	100	81.564	Hippocampus_comes
ENSSDUG00000022640	arl5c	100	82.123	ENSIPUG00000023232	arl5c	100	82.123	Ictalurus_punctatus
ENSSDUG00000022640	arl5c	100	87.151	ENSKMAG00000011323	arl5c	100	87.151	Kryptolebias_marmoratus
ENSSDUG00000022640	arl5c	100	86.592	ENSLBEG00000006177	arl5c	86	86.592	Labrus_bergylta
ENSSDUG00000022640	arl5c	100	88.827	ENSMAMG00000022157	arl5c	100	88.827	Mastacembelus_armatus
ENSSDUG00000022640	arl5c	100	87.709	ENSMZEG00005022925	arl5c	100	87.709	Maylandia_zebra
ENSSDUG00000022640	arl5c	95	90.854	ENSMMOG00000020851	arl5c	96	90.854	Mola_mola
ENSSDUG00000022640	arl5c	99	83.041	ENSMALG00000009306	arl5c	97	83.041	Monopterus_albus
ENSSDUG00000022640	arl5c	100	88.268	ENSNBRG00000020245	arl5c	100	88.268	Neolamprologus_brichardi
ENSSDUG00000022640	arl5c	100	88.268	ENSONIG00000000890	arl5c	99	88.268	Oreochromis_niloticus
ENSSDUG00000022640	arl5c	100	83.240	ENSORLG00000002960	arl5c	100	84.146	Oryzias_latipes
ENSSDUG00000022640	arl5c	100	83.240	ENSORLG00020010074	arl5c	100	84.146	Oryzias_latipes_hni
ENSSDUG00000022640	arl5c	100	83.240	ENSORLG00015002752	arl5c	100	84.146	Oryzias_latipes_hsok
ENSSDUG00000022640	arl5c	97	82.659	ENSOMEG00000021718	arl5c	98	82.659	Oryzias_melastigma
ENSSDUG00000022640	arl5c	100	83.799	ENSPKIG00000021727	arl5c	100	83.799	Paramormyrops_kingsleyae
ENSSDUG00000022640	arl5c	100	87.151	ENSPFOG00000007842	arl5c	99	87.151	Poecilia_formosa
ENSSDUG00000022640	arl5c	100	86.592	ENSPLAG00000002394	arl5c	100	86.592	Poecilia_latipinna
ENSSDUG00000022640	arl5c	99	84.884	ENSPMEG00000000631	arl5c	99	84.884	Poecilia_mexicana
ENSSDUG00000022640	arl5c	100	87.709	ENSPREG00000008730	arl5c	100	87.709	Poecilia_reticulata
ENSSDUG00000022640	arl5c	100	87.709	ENSPNYG00000012720	arl5c	100	87.709	Pundamilia_nyererei
ENSSDUG00000022640	arl5c	100	81.564	ENSPNAG00000002310	arl5c	100	81.564	Pygocentrus_nattereri
ENSSDUG00000022640	arl5c	100	83.240	ENSSFOG00015023529	arl5c	100	83.240	Scleropages_formosus
ENSSDUG00000022640	arl5c	100	89.944	ENSSMAG00000010552	arl5c	100	89.944	Scophthalmus_maximus
ENSSDUG00000022640	arl5c	100	100.000	ENSSLDG00000000728	arl5c	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000022640	arl5c	100	88.268	ENSSPAG00000007687	arl5c	100	88.268	Stegastes_partitus
ENSSDUG00000022640	arl5c	100	87.151	ENSTRUG00000022814	arl5c	100	87.151	Takifugu_rubripes
ENSSDUG00000022640	arl5c	100	88.268	ENSTNIG00000003015	arl5c	99	88.268	Tetraodon_nigroviridis
ENSSDUG00000022640	arl5c	100	86.592	ENSXCOG00000017380	arl5c	100	86.592	Xiphophorus_couchianus
ENSSDUG00000022640	arl5c	100	86.034	ENSXMAG00000008447	arl5c	100	86.034	Xiphophorus_maculatus