EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000022770 (Gene tree)
Gene ID: -
Gene Symbol: LSM14B (1 of many)
Alias: C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 2966 bases
Position: chrBDQW01000043.1:1180686-1183651
Accession: 15887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000031675	FDF	PF09532.10	1.1e-11	1	1
ENSSDUP00000031675	LSM14	PF12701.7	3.4e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000032220	LSM14B (1 of many)-201	1413	-	ENSSDUP00000031675	379 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000022770's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022770's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000022770	LSM14B	90	53.107	ENSSDUG00000020977	lsm14b	92	54.144
ENSSDUG00000022770	LSM14B	90	38.642	ENSSDUG00000007229	lsm14ab	85	40.779
ENSSDUG00000022770	LSM14B	62	55.128	ENSSDUG00000000495	lsm14aa	63	52.047

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022770	LSM14B	92	53.297	ENSG00000149657	LSM14B	99	50.492	Homo_sapiens
ENSSDUG00000022770	LSM14B	89	52.874	ENSAPOG00000001780	lsm14b	91	53.352	Acanthochromis_polyacanthus
ENSSDUG00000022770	LSM14B	92	47.772	ENSAMEG00000013430	LSM14B	93	47.291	Ailuropoda_melanoleuca
ENSSDUG00000022770	LSM14B	63	54.656	ENSACIG00000003147	LSM14B	90	54.656	Amphilophus_citrinellus
ENSSDUG00000022770	LSM14B	91	49.857	ENSACIG00000012266	lsm14b	92	49.438	Amphilophus_citrinellus
ENSSDUG00000022770	LSM14B	100	77.202	ENSAOCG00000006667	LSM14B	100	77.202	Amphiprion_ocellaris
ENSSDUG00000022770	LSM14B	89	52.299	ENSAOCG00000012380	lsm14b	91	52.793	Amphiprion_ocellaris
ENSSDUG00000022770	LSM14B	89	49.713	ENSAPEG00000023633	lsm14b	90	47.486	Amphiprion_percula
ENSSDUG00000022770	LSM14B	76	70.927	ENSATEG00000015895	LSM14B	98	70.927	Anabas_testudineus
ENSSDUG00000022770	LSM14B	89	52.035	ENSATEG00000016603	lsm14b	91	51.989	Anabas_testudineus
ENSSDUG00000022770	LSM14B	83	44.892	ENSAPLG00000013203	LSM14B	93	45.067	Anas_platyrhynchos
ENSSDUG00000022770	LSM14B	92	53.151	ENSACAG00000016195	LSM14B	92	52.846	Anolis_carolinensis
ENSSDUG00000022770	LSM14B	92	53.552	ENSANAG00000037915	LSM14B	92	53.117	Aotus_nancymaae
ENSSDUG00000022770	LSM14B	55	63.768	ENSACLG00000019624	-	69	63.366	Astatotilapia_calliptera
ENSSDUG00000022770	LSM14B	55	57.005	ENSACLG00000008384	-	66	52.475	Astatotilapia_calliptera
ENSSDUG00000022770	LSM14B	55	60.870	ENSACLG00000011955	-	68	60.396	Astatotilapia_calliptera
ENSSDUG00000022770	LSM14B	89	52.326	ENSACLG00000019663	lsm14b	91	53.276	Astatotilapia_calliptera
ENSSDUG00000022770	LSM14B	91	59.331	ENSAMXG00000002865	lsm14b	93	59.290	Astyanax_mexicanus
ENSSDUG00000022770	LSM14B	92	47.912	ENSBTAG00000021558	LSM14B	92	47.794	Bos_taurus
ENSSDUG00000022770	LSM14B	92	53.039	ENSCJAG00000014434	LSM14B	92	53.425	Callithrix_jacchus
ENSSDUG00000022770	LSM14B	82	45.205	ENSCAFG00000012518	LSM14B	91	44.687	Canis_familiaris
ENSSDUG00000022770	LSM14B	92	53.444	ENSCAFG00020022150	LSM14B	92	53.151	Canis_lupus_dingo
ENSSDUG00000022770	LSM14B	94	44.032	ENSCHIG00000022681	-	89	43.909	Capra_hircus
ENSSDUG00000022770	LSM14B	92	53.261	ENSCHIG00000010284	-	92	53.117	Capra_hircus
ENSSDUG00000022770	LSM14B	81	50.621	ENSTSYG00000031914	LSM14B	81	50.462	Carlito_syrichta
ENSSDUG00000022770	LSM14B	81	51.534	ENSCAPG00000013059	LSM14B	92	50.459	Cavia_aperea
ENSSDUG00000022770	LSM14B	81	51.692	ENSCPOG00000038080	LSM14B	92	50.613	Cavia_porcellus
ENSSDUG00000022770	LSM14B	92	53.719	ENSCCAG00000021267	LSM14B	92	53.279	Cebus_capucinus
ENSSDUG00000022770	LSM14B	92	39.037	ENSCCAG00000024900	-	77	39.257	Cebus_capucinus
ENSSDUG00000022770	LSM14B	92	52.747	ENSCATG00000036006	LSM14B	92	53.151	Cercocebus_atys
ENSSDUG00000022770	LSM14B	81	51.084	ENSCLAG00000003186	LSM14B	92	51.227	Chinchilla_lanigera
ENSSDUG00000022770	LSM14B	92	47.891	ENSCSAG00000015729	LSM14B	92	47.525	Chlorocebus_sabaeus
ENSSDUG00000022770	LSM14B	62	37.945	ENSCHOG00000006997	-	89	37.398	Choloepus_hoffmanni
ENSSDUG00000022770	LSM14B	92	47.891	ENSCPBG00000027065	LSM14B	93	48.030	Chrysemys_picta_bellii
ENSSDUG00000022770	LSM14B	81	50.000	ENSCANG00000036986	LSM14B	92	50.769	Colobus_angolensis_palliatus
ENSSDUG00000022770	LSM14B	92	54.270	ENSCGRG00001018399	Lsm14b	92	53.825	Cricetulus_griseus_chok1gshd
ENSSDUG00000022770	LSM14B	61	41.404	ENSCGRG00000006111	-	93	40.484	Cricetulus_griseus_crigri
ENSSDUG00000022770	LSM14B	89	50.435	ENSCSEG00000004722	lsm14b	91	50.992	Cynoglossus_semilaevis
ENSSDUG00000022770	LSM14B	99	67.609	ENSCSEG00000020669	LSM14B	99	66.838	Cynoglossus_semilaevis
ENSSDUG00000022770	LSM14B	67	45.627	ENSCVAG00000012433	-	90	48.996	Cyprinodon_variegatus
ENSSDUG00000022770	LSM14B	92	56.198	ENSDARG00000025386	lsm14b	92	55.769	Danio_rerio
ENSSDUG00000022770	LSM14B	61	40.830	ENSDNOG00000025246	LSM14B	90	40.411	Dasypus_novemcinctus
ENSSDUG00000022770	LSM14B	82	51.077	ENSDORG00000016683	Lsm14b	80	50.610	Dipodomys_ordii
ENSSDUG00000022770	LSM14B	93	43.631	ENSETEG00000001869	-	92	40.872	Echinops_telfairi
ENSSDUG00000022770	LSM14B	57	44.915	ENSETEG00000011188	-	93	42.795	Echinops_telfairi
ENSSDUG00000022770	LSM14B	61	43.320	ENSEASG00005023218	LSM14B	90	40.753	Equus_asinus_asinus
ENSSDUG00000022770	LSM14B	92	53.994	ENSECAG00000010659	LSM14B	92	54.521	Equus_caballus
ENSSDUG00000022770	LSM14B	75	44.521	ENSEEUG00000007331	LSM14B	79	63.636	Erinaceus_europaeus
ENSSDUG00000022770	LSM14B	99	56.298	ENSELUG00000005780	lsm14b	93	57.618	Esox_lucius
ENSSDUG00000022770	LSM14B	91	59.714	ENSELUG00000016299	LSM14B	100	60.000	Esox_lucius
ENSSDUG00000022770	LSM14B	92	53.994	ENSFCAG00000003248	LSM14B	92	53.699	Felis_catus
ENSSDUG00000022770	LSM14B	82	45.628	ENSFALG00000010618	LSM14B	93	45.799	Ficedula_albicollis
ENSSDUG00000022770	LSM14B	81	49.538	ENSFDAG00000002214	LSM14B	92	49.695	Fukomys_damarensis
ENSSDUG00000022770	LSM14B	82	68.652	ENSFHEG00000003362	LSM14B	84	66.269	Fundulus_heteroclitus
ENSSDUG00000022770	LSM14B	91	49.857	ENSFHEG00000006237	lsm14b	90	50.000	Fundulus_heteroclitus
ENSSDUG00000022770	LSM14B	96	52.406	ENSGMOG00000017115	lsm14b	89	50.847	Gadus_morhua
ENSSDUG00000022770	LSM14B	92	50.407	ENSGALG00000005125	LSM14B	93	53.083	Gallus_gallus
ENSSDUG00000022770	LSM14B	66	58.333	ENSGAFG00000013723	LSM14B	89	56.723	Gambusia_affinis
ENSSDUG00000022770	LSM14B	89	46.571	ENSGAFG00000020318	lsm14b	91	47.339	Gambusia_affinis
ENSSDUG00000022770	LSM14B	91	47.967	ENSGACG00000009973	lsm14b	92	50.704	Gasterosteus_aculeatus
ENSSDUG00000022770	LSM14B	55	44.186	ENSGAGG00000004106	LSM14B	79	44.037	Gopherus_agassizii
ENSSDUG00000022770	LSM14B	83	49.697	ENSGGOG00000005630	LSM14B	87	50.151	Gorilla_gorilla
ENSSDUG00000022770	LSM14B	92	52.893	ENSHGLG00000015055	LSM14B	92	53.005	Heterocephalus_glaber_female
ENSSDUG00000022770	LSM14B	81	49.221	ENSHGLG00100015273	LSM14B	91	49.383	Heterocephalus_glaber_male
ENSSDUG00000022770	LSM14B	100	68.490	ENSHCOG00000018747	LSM14B	94	68.539	Hippocampus_comes
ENSSDUG00000022770	LSM14B	60	41.277	ENSHCOG00000004867	lsm14b	87	40.329	Hippocampus_comes
ENSSDUG00000022770	LSM14B	91	57.382	ENSIPUG00000014946	lsm14b	87	57.851	Ictalurus_punctatus
ENSSDUG00000022770	LSM14B	81	51.084	ENSSTOG00000020482	LSM14B	92	50.613	Ictidomys_tridecemlineatus
ENSSDUG00000022770	LSM14B	91	54.318	ENSJJAG00000012728	Lsm14b	91	53.867	Jaculus_jaculus
ENSSDUG00000022770	LSM14B	89	49.855	ENSKMAG00000017524	lsm14b	92	50.712	Kryptolebias_marmoratus
ENSSDUG00000022770	LSM14B	54	68.137	ENSKMAG00000012834	-	100	67.241	Kryptolebias_marmoratus
ENSSDUG00000022770	LSM14B	70	58.491	ENSLBEG00000007951	LSM14B	100	58.868	Labrus_bergylta
ENSSDUG00000022770	LSM14B	92	67.832	ENSLACG00000003849	LSM14B	93	47.202	Latimeria_chalumnae
ENSSDUG00000022770	LSM14B	100	57.431	ENSLOCG00000003746	lsm14b	100	56.927	Lepisosteus_oculatus
ENSSDUG00000022770	LSM14B	82	48.788	ENSLAFG00000007492	LSM14B	92	49.096	Loxodonta_africana
ENSSDUG00000022770	LSM14B	92	53.297	ENSMFAG00000041479	LSM14B	92	53.699	Macaca_fascicularis
ENSSDUG00000022770	LSM14B	92	53.297	ENSMMUG00000014084	LSM14B	92	53.699	Macaca_mulatta
ENSSDUG00000022770	LSM14B	92	53.297	ENSMNEG00000045573	LSM14B	92	53.699	Macaca_nemestrina
ENSSDUG00000022770	LSM14B	81	49.691	ENSMLEG00000040895	LSM14B	92	50.154	Mandrillus_leucophaeus
ENSSDUG00000022770	LSM14B	100	78.125	ENSMAMG00000024124	LSM14B	100	78.125	Mastacembelus_armatus
ENSSDUG00000022770	LSM14B	89	49.858	ENSMAMG00000020539	lsm14b	91	49.725	Mastacembelus_armatus
ENSSDUG00000022770	LSM14B	55	53.623	ENSMZEG00005026087	-	67	51.980	Maylandia_zebra
ENSSDUG00000022770	LSM14B	89	52.326	ENSMZEG00005000987	lsm14b	91	52.422	Maylandia_zebra
ENSSDUG00000022770	LSM14B	92	68.975	ENSMZEG00005026001	LSM14B	95	69.529	Maylandia_zebra
ENSSDUG00000022770	LSM14B	55	54.106	ENSMZEG00005002688	-	67	52.475	Maylandia_zebra
ENSSDUG00000022770	LSM14B	83	48.071	ENSMGAG00000005300	LSM14B	92	49.558	Meleagris_gallopavo
ENSSDUG00000022770	LSM14B	92	53.867	ENSMAUG00000020700	Lsm14b	92	53.425	Mesocricetus_auratus
ENSSDUG00000022770	LSM14B	92	54.270	ENSMICG00000014675	LSM14B	92	53.825	Microcebus_murinus
ENSSDUG00000022770	LSM14B	55	44.340	ENSMOCG00000005119	-	69	43.868	Microtus_ochrogaster
ENSSDUG00000022770	LSM14B	92	53.867	ENSMOCG00000020600	Lsm14b	92	53.425	Microtus_ochrogaster
ENSSDUG00000022770	LSM14B	100	67.513	ENSMMOG00000017321	LSM14B	100	69.091	Mola_mola
ENSSDUG00000022770	LSM14B	91	48.485	ENSMMOG00000020042	lsm14b	96	48.267	Mola_mola
ENSSDUG00000022770	LSM14B	61	42.456	ENSMODG00000016690	LSM14B	90	42.708	Monodelphis_domestica
ENSSDUG00000022770	LSM14B	100	77.662	ENSMALG00000022251	LSM14B	100	78.182	Monopterus_albus
ENSSDUG00000022770	LSM14B	97	50.396	ENSMALG00000004783	lsm14b	92	48.603	Monopterus_albus
ENSSDUG00000022770	LSM14B	92	53.315	MGP_CAROLIEiJ_G0024770	Lsm14b	92	53.151	Mus_caroli
ENSSDUG00000022770	LSM14B	92	53.315	ENSMUSG00000039108	Lsm14b	92	53.151	Mus_musculus
ENSSDUG00000022770	LSM14B	92	53.867	MGP_PahariEiJ_G0026214	Lsm14b	92	53.699	Mus_pahari
ENSSDUG00000022770	LSM14B	92	53.315	MGP_SPRETEiJ_G0025693	Lsm14b	92	53.151	Mus_spretus
ENSSDUG00000022770	LSM14B	87	44.301	ENSMPUG00000007584	LSM14B	93	43.814	Mustela_putorius_furo
ENSSDUG00000022770	LSM14B	90	53.740	ENSMLUG00000000304	LSM14B	92	53.973	Myotis_lucifugus
ENSSDUG00000022770	LSM14B	55	45.291	ENSNGAG00000016550	Lsm14b	63	54.795	Nannospalax_galili
ENSSDUG00000022770	LSM14B	81	50.309	ENSNLEG00000015757	LSM14B	92	50.769	Nomascus_leucogenys
ENSSDUG00000022770	LSM14B	66	68.345	ENSMEUG00000008267	-	67	70.504	Notamacropus_eugenii
ENSSDUG00000022770	LSM14B	92	53.444	ENSODEG00000004099	LSM14B	92	53.552	Octodon_degus
ENSSDUG00000022770	LSM14B	89	53.198	ENSONIG00000020318	lsm14b	91	53.846	Oreochromis_niloticus
ENSSDUG00000022770	LSM14B	74	48.432	ENSOANG00000003370	LSM14B	98	48.428	Ornithorhynchus_anatinus
ENSSDUG00000022770	LSM14B	82	50.153	ENSOCUG00000006279	LSM14B	92	50.000	Oryctolagus_cuniculus
ENSSDUG00000022770	LSM14B	89	50.000	ENSORLG00000013525	lsm14b	91	49.859	Oryzias_latipes
ENSSDUG00000022770	LSM14B	93	68.067	ENSORLG00000028353	LSM14B	93	66.761	Oryzias_latipes
ENSSDUG00000022770	LSM14B	89	49.709	ENSORLG00020020553	lsm14b	91	49.435	Oryzias_latipes_hni
ENSSDUG00000022770	LSM14B	63	48.689	ENSORLG00020018191	-	87	47.547	Oryzias_latipes_hni
ENSSDUG00000022770	LSM14B	93	68.627	ENSORLG00015013157	LSM14B	93	67.324	Oryzias_latipes_hsok
ENSSDUG00000022770	LSM14B	89	49.709	ENSORLG00015016862	lsm14b	91	49.435	Oryzias_latipes_hsok
ENSSDUG00000022770	LSM14B	89	49.709	ENSOMEG00000023917	lsm14b	91	50.712	Oryzias_melastigma
ENSSDUG00000022770	LSM14B	65	51.220	ENSOMEG00000000171	-	86	53.112	Oryzias_melastigma
ENSSDUG00000022770	LSM14B	92	48.628	ENSOGAG00000003915	LSM14B	92	48.267	Otolemur_garnettii
ENSSDUG00000022770	LSM14B	83	44.533	ENSOARG00000014706	LSM14B	92	44.149	Ovis_aries
ENSSDUG00000022770	LSM14B	83	49.697	ENSPPAG00000035799	LSM14B	87	50.151	Pan_paniscus
ENSSDUG00000022770	LSM14B	92	53.994	ENSPPRG00000009197	LSM14B	92	53.699	Panthera_pardus
ENSSDUG00000022770	LSM14B	61	42.742	ENSPTIG00000021518	LSM14B	93	40.625	Panthera_tigris_altaica
ENSSDUG00000022770	LSM14B	92	53.297	ENSPTRG00000013696	LSM14B	92	53.699	Pan_troglodytes
ENSSDUG00000022770	LSM14B	92	53.022	ENSPANG00000011747	LSM14B	92	53.425	Papio_anubis
ENSSDUG00000022770	LSM14B	92	56.901	ENSPKIG00000003275	lsm14b	94	72.549	Paramormyrops_kingsleyae
ENSSDUG00000022770	LSM14B	82	50.000	ENSPSIG00000014762	LSM14B	92	50.456	Pelodiscus_sinensis
ENSSDUG00000022770	LSM14B	91	54.144	ENSPEMG00000017688	Lsm14b	92	53.699	Peromyscus_maniculatus_bairdii
ENSSDUG00000022770	LSM14B	92	54.420	ENSPCIG00000013405	LSM14B	92	55.342	Phascolarctos_cinereus
ENSSDUG00000022770	LSM14B	92	51.404	ENSPFOG00000005631	lsm14b	91	49.157	Poecilia_formosa
ENSSDUG00000022770	LSM14B	92	51.667	ENSPLAG00000002449	lsm14b	91	49.300	Poecilia_latipinna
ENSSDUG00000022770	LSM14B	91	68.696	ENSPLAG00000005793	LSM14B	99	66.491	Poecilia_latipinna
ENSSDUG00000022770	LSM14B	90	68.966	ENSPMEG00000022953	LSM14B	99	66.755	Poecilia_mexicana
ENSSDUG00000022770	LSM14B	91	50.862	ENSPMEG00000000745	lsm14b	91	49.020	Poecilia_mexicana
ENSSDUG00000022770	LSM14B	69	54.196	ENSPREG00000007828	LSM14B	99	52.797	Poecilia_reticulata
ENSSDUG00000022770	LSM14B	92	53.994	ENSPCOG00000013625	LSM14B	92	54.247	Propithecus_coquereli
ENSSDUG00000022770	LSM14B	91	58.592	ENSPNAG00000012777	lsm14b	92	59.392	Pygocentrus_nattereri
ENSSDUG00000022770	LSM14B	92	47.382	ENSRNOG00000054557	Lsm14b	92	47.525	Rattus_norvegicus
ENSSDUG00000022770	LSM14B	81	49.846	ENSRBIG00000033461	LSM14B	91	50.613	Rhinopithecus_bieti
ENSSDUG00000022770	LSM14B	83	50.755	ENSRROG00000042949	LSM14B	83	51.506	Rhinopithecus_roxellana
ENSSDUG00000022770	LSM14B	81	50.000	ENSSBOG00000032820	LSM14B	92	49.544	Saimiri_boliviensis_boliviensis
ENSSDUG00000022770	LSM14B	83	51.368	ENSSHAG00000015528	LSM14B	89	52.410	Sarcophilus_harrisii
ENSSDUG00000022770	LSM14B	91	54.674	ENSSFOG00015004627	lsm14b	93	55.525	Scleropages_formosus
ENSSDUG00000022770	LSM14B	90	52.286	ENSSMAG00000012725	lsm14b	92	52.941	Scophthalmus_maximus
ENSSDUG00000022770	LSM14B	100	79.897	ENSSMAG00000000135	LSM14B	99	80.412	Scophthalmus_maximus
ENSSDUG00000022770	LSM14B	70	77.778	ENSSLDG00000011354	-	100	80.556	Seriola_lalandi_dorsalis
ENSSDUG00000022770	LSM14B	54	42.009	ENSSARG00000007749	-	98	41.096	Sorex_araneus
ENSSDUG00000022770	LSM14B	92	48.157	ENSSPUG00000014360	LSM14B	93	52.312	Sphenodon_punctatus
ENSSDUG00000022770	LSM14B	89	52.326	ENSSPAG00000020915	lsm14b	90	51.412	Stegastes_partitus
ENSSDUG00000022770	LSM14B	70	56.890	ENSSPAG00000018854	-	100	51.957	Stegastes_partitus
ENSSDUG00000022770	LSM14B	92	52.717	ENSSSCG00000026052	LSM14B	90	39.726	Sus_scrofa
ENSSDUG00000022770	LSM14B	82	50.153	ENSTGUG00000007884	LSM14B	92	51.205	Taeniopygia_guttata
ENSSDUG00000022770	LSM14B	97	47.532	ENSTRUG00000011354	lsm14b	91	46.301	Takifugu_rubripes
ENSSDUG00000022770	LSM14B	100	73.643	ENSTRUG00000001529	LSM14B	100	73.643	Takifugu_rubripes
ENSSDUG00000022770	LSM14B	91	49.724	ENSTNIG00000002445	lsm14b	97	49.482	Tetraodon_nigroviridis
ENSSDUG00000022770	LSM14B	73	76.923	ENSTTRG00000011043	LSM14B	76	76.923	Tursiops_truncatus
ENSSDUG00000022770	LSM14B	92	47.671	ENSUAMG00000025298	LSM14B	92	47.411	Ursus_americanus
ENSSDUG00000022770	LSM14B	92	47.671	ENSUMAG00000000480	LSM14B	92	47.411	Ursus_maritimus
ENSSDUG00000022770	LSM14B	82	49.538	ENSVVUG00000015920	LSM14B	90	50.000	Vulpes_vulpes
ENSSDUG00000022770	LSM14B	86	51.744	ENSXETG00000001997	lsm14b	100	51.744	Xenopus_tropicalis
ENSSDUG00000022770	LSM14B	89	48.256	ENSXMAG00000010013	lsm14b	91	48.295	Xiphophorus_maculatus