EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000022786 (Gene tree)
Gene ID: 111221562
Gene Symbol: r3hcc1
Alias: si:dkey-191l12.1
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 7742 bases
Position: chrBDQW01000088.1:10876305-10884046
Accession: 111221562
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000031697	R3H	PF01424.22	9.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000032244	-	3737	XM_022745009	ENSSDUP00000031697	430 (aa)	XP_022600730	UPI000BBE4B45

Gene Model

Click here to download ENSSDUG00000022786's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022786's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022786	r3hcc1	97	32.118	ENSG00000104679	R3HCC1	98	42.857	Homo_sapiens
ENSSDUG00000022786	r3hcc1	98	64.133	ENSAPOG00000003616	r3hcc1	93	64.371	Acanthochromis_polyacanthus
ENSSDUG00000022786	r3hcc1	97	33.482	ENSAMEG00000002963	R3HCC1	64	46.853	Ailuropoda_melanoleuca
ENSSDUG00000022786	r3hcc1	99	63.415	ENSACIG00000017144	r3hcc1	95	68.590	Amphilophus_citrinellus
ENSSDUG00000022786	r3hcc1	97	68.974	ENSAOCG00000003945	r3hcc1	100	69.212	Amphiprion_ocellaris
ENSSDUG00000022786	r3hcc1	97	68.496	ENSAPEG00000003613	r3hcc1	100	68.496	Amphiprion_percula
ENSSDUG00000022786	r3hcc1	91	77.863	ENSATEG00000023860	r3hcc1	100	77.506	Anabas_testudineus
ENSSDUG00000022786	r3hcc1	98	35.730	ENSACAG00000016627	R3HCC1	96	35.506	Anolis_carolinensis
ENSSDUG00000022786	r3hcc1	97	31.020	ENSANAG00000036169	R3HCC1	90	30.700	Aotus_nancymaae
ENSSDUG00000022786	r3hcc1	97	32.609	ENSBTAG00000025830	R3HCC1	93	31.808	Bos_taurus
ENSSDUG00000022786	r3hcc1	97	31.180	ENSCJAG00000020118	R3HCC1	54	51.807	Callithrix_jacchus
ENSSDUG00000022786	r3hcc1	97	32.080	ENSCHIG00000009107	R3HCC1	96	32.543	Capra_hircus
ENSSDUG00000022786	r3hcc1	97	32.294	ENSTSYG00000000511	R3HCC1	75	32.080	Carlito_syrichta
ENSSDUG00000022786	r3hcc1	97	32.347	ENSCPOG00000009696	R3HCC1	97	32.347	Cavia_porcellus
ENSSDUG00000022786	r3hcc1	97	30.870	ENSCCAG00000037811	R3HCC1	54	51.807	Cebus_capucinus
ENSSDUG00000022786	r3hcc1	55	51.807	ENSCATG00000032971	R3HCC1	55	51.807	Cercocebus_atys
ENSSDUG00000022786	r3hcc1	97	35.845	ENSCLAG00000015556	R3HCC1	81	34.910	Chinchilla_lanigera
ENSSDUG00000022786	r3hcc1	70	45.578	ENSCHOG00000000396	R3HCC1	93	33.978	Choloepus_hoffmanni
ENSSDUG00000022786	r3hcc1	98	31.718	ENSCANG00000029441	R3HCC1	89	32.080	Colobus_angolensis_palliatus
ENSSDUG00000022786	r3hcc1	68	44.586	ENSCGRG00001014977	R3hcc1	60	45.455	Cricetulus_griseus_chok1gshd
ENSSDUG00000022786	r3hcc1	68	44.586	ENSCGRG00000004454	R3hcc1	60	45.455	Cricetulus_griseus_crigri
ENSSDUG00000022786	r3hcc1	97	67.221	ENSCSEG00000005748	r3hcc1	99	66.983	Cynoglossus_semilaevis
ENSSDUG00000022786	r3hcc1	84	55.707	ENSCVAG00000002640	r3hcc1	96	54.372	Cyprinodon_variegatus
ENSSDUG00000022786	r3hcc1	98	44.028	ENSDARG00000099593	r3hcc1	99	43.256	Danio_rerio
ENSSDUG00000022786	r3hcc1	97	31.004	ENSDNOG00000007168	R3HCC1	60	46.154	Dasypus_novemcinctus
ENSSDUG00000022786	r3hcc1	68	45.638	ENSECAG00000025013	R3HCC1	64	46.154	Equus_caballus
ENSSDUG00000022786	r3hcc1	97	33.040	ENSEEUG00000011918	R3HCC1	93	32.747	Erinaceus_europaeus
ENSSDUG00000022786	r3hcc1	95	48.585	ENSELUG00000023650	r3hcc1	98	50.976	Esox_lucius
ENSSDUG00000022786	r3hcc1	97	31.887	ENSFCAG00000012395	R3HCC1	65	46.154	Felis_catus
ENSSDUG00000022786	r3hcc1	82	48.571	ENSGMOG00000017590	-	96	48.171	Gadus_morhua
ENSSDUG00000022786	r3hcc1	99	66.355	ENSGAFG00000008747	-	93	64.450	Gambusia_affinis
ENSSDUG00000022786	r3hcc1	98	68.794	ENSGACG00000008447	r3hcc1	95	67.696	Gasterosteus_aculeatus
ENSSDUG00000022786	r3hcc1	97	33.180	ENSGGOG00000013817	R3HCC1	96	32.965	Gorilla_gorilla
ENSSDUG00000022786	r3hcc1	76	71.429	ENSHBUG00000022250	-	100	71.429	Haplochromis_burtoni
ENSSDUG00000022786	r3hcc1	97	33.410	ENSHGLG00000010517	R3HCC1	89	33.181	Heterocephalus_glaber_female
ENSSDUG00000022786	r3hcc1	97	33.410	ENSHGLG00100006388	R3HCC1	89	33.181	Heterocephalus_glaber_male
ENSSDUG00000022786	r3hcc1	98	57.583	ENSHCOG00000011745	r3hcc1	94	57.377	Hippocampus_comes
ENSSDUG00000022786	r3hcc1	99	50.708	ENSIPUG00000024504	r3hcc1	87	51.179	Ictalurus_punctatus
ENSSDUG00000022786	r3hcc1	75	47.651	ENSSTOG00000027130	R3HCC1	63	50.382	Ictidomys_tridecemlineatus
ENSSDUG00000022786	r3hcc1	94	66.667	ENSKMAG00000000286	r3hcc1	100	64.461	Kryptolebias_marmoratus
ENSSDUG00000022786	r3hcc1	98	47.235	ENSLOCG00000015442	r3hcc1	99	45.192	Lepisosteus_oculatus
ENSSDUG00000022786	r3hcc1	76	42.771	ENSLAFG00000016137	R3HCC1	58	48.062	Loxodonta_africana
ENSSDUG00000022786	r3hcc1	56	51.807	ENSMFAG00000032894	R3HCC1	86	32.444	Macaca_fascicularis
ENSSDUG00000022786	r3hcc1	56	51.807	ENSMMUG00000016655	R3HCC1	87	32.667	Macaca_mulatta
ENSSDUG00000022786	r3hcc1	97	33.630	ENSMNEG00000043283	R3HCC1	81	33.185	Macaca_nemestrina
ENSSDUG00000022786	r3hcc1	55	51.807	ENSMLEG00000030147	R3HCC1	89	32.294	Mandrillus_leucophaeus
ENSSDUG00000022786	r3hcc1	94	77.778	ENSMAMG00000018146	r3hcc1	100	77.778	Mastacembelus_armatus
ENSSDUG00000022786	r3hcc1	98	34.562	ENSMGAG00000001356	R3HCC1	60	47.887	Meleagris_gallopavo
ENSSDUG00000022786	r3hcc1	97	33.477	ENSMICG00000011146	R3HCC1	91	33.261	Microcebus_murinus
ENSSDUG00000022786	r3hcc1	67	45.205	ENSMOCG00000018508	R3hcc1	60	46.154	Microtus_ochrogaster
ENSSDUG00000022786	r3hcc1	94	72.346	ENSMALG00000000731	r3hcc1	100	72.346	Monopterus_albus
ENSSDUG00000022786	r3hcc1	72	45.205	MGP_CAROLIEiJ_G0019467	R3hcc1	59	46.154	Mus_caroli
ENSSDUG00000022786	r3hcc1	73	44.966	ENSMUSG00000034194	R3hcc1	63	46.154	Mus_musculus
ENSSDUG00000022786	r3hcc1	73	44.966	MGP_PahariEiJ_G0030484	R3hcc1	62	46.154	Mus_pahari
ENSSDUG00000022786	r3hcc1	73	44.966	MGP_SPRETEiJ_G0020359	R3hcc1	63	46.154	Mus_spretus
ENSSDUG00000022786	r3hcc1	97	31.749	ENSMLUG00000000266	R3HCC1	89	32.391	Myotis_lucifugus
ENSSDUG00000022786	r3hcc1	66	47.183	ENSNGAG00000016747	R3hcc1	62	47.183	Nannospalax_galili
ENSSDUG00000022786	r3hcc1	89	92.857	ENSNBRG00000016975	-	84	77.143	Neolamprologus_brichardi
ENSSDUG00000022786	r3hcc1	68	38.158	ENSNLEG00000015944	R3HCC1	59	40.299	Nomascus_leucogenys
ENSSDUG00000022786	r3hcc1	99	34.247	ENSMEUG00000010587	R3HCC1	97	34.240	Notamacropus_eugenii
ENSSDUG00000022786	r3hcc1	97	31.393	ENSODEG00000007529	R3HCC1	69	42.282	Octodon_degus
ENSSDUG00000022786	r3hcc1	98	33.408	ENSOCUG00000023554	R3HCC1	83	33.408	Oryctolagus_cuniculus
ENSSDUG00000022786	r3hcc1	94	54.187	ENSORLG00000016816	r3hcc1	100	53.202	Oryzias_latipes
ENSSDUG00000022786	r3hcc1	94	53.941	ENSORLG00020012005	r3hcc1	100	53.202	Oryzias_latipes_hni
ENSSDUG00000022786	r3hcc1	94	54.187	ENSORLG00015007018	r3hcc1	100	53.202	Oryzias_latipes_hsok
ENSSDUG00000022786	r3hcc1	94	54.680	ENSOMEG00000000816	r3hcc1	100	53.448	Oryzias_melastigma
ENSSDUG00000022786	r3hcc1	97	33.407	ENSOGAG00000001291	R3HCC1	60	46.154	Otolemur_garnettii
ENSSDUG00000022786	r3hcc1	97	32.974	ENSOARG00000010146	R3HCC1	94	33.042	Ovis_aries
ENSSDUG00000022786	r3hcc1	97	31.808	ENSPPAG00000033165	R3HCC1	63	45.802	Pan_paniscus
ENSSDUG00000022786	r3hcc1	97	32.166	ENSPPRG00000002522	R3HCC1	57	51.807	Panthera_pardus
ENSSDUG00000022786	r3hcc1	97	31.891	ENSPTRG00000020076	R3HCC1	59	45.802	Pan_troglodytes
ENSSDUG00000022786	r3hcc1	55	51.807	ENSPANG00000000453	R3HCC1	89	32.667	Papio_anubis
ENSSDUG00000022786	r3hcc1	90	46.056	ENSPKIG00000014426	-	95	45.663	Paramormyrops_kingsleyae
ENSSDUG00000022786	r3hcc1	90	48.010	ENSPKIG00000020397	-	95	47.000	Paramormyrops_kingsleyae
ENSSDUG00000022786	r3hcc1	97	36.073	ENSPSIG00000017664	R3HCC1	96	35.945	Pelodiscus_sinensis
ENSSDUG00000022786	r3hcc1	53	62.651	ENSPMGG00000007792	r3hcc1	63	57.534	Periophthalmus_magnuspinnatus
ENSSDUG00000022786	r3hcc1	97	32.438	ENSPEMG00000007118	R3hcc1	96	32.365	Peromyscus_maniculatus_bairdii
ENSSDUG00000022786	r3hcc1	90	31.841	ENSPCIG00000022718	-	83	31.961	Phascolarctos_cinereus
ENSSDUG00000022786	r3hcc1	99	66.121	ENSPFOG00000022301	r3hcc1	92	64.953	Poecilia_formosa
ENSSDUG00000022786	r3hcc1	99	66.355	ENSPLAG00000010794	r3hcc1	92	65.187	Poecilia_latipinna
ENSSDUG00000022786	r3hcc1	99	66.121	ENSPMEG00000022515	r3hcc1	92	64.953	Poecilia_mexicana
ENSSDUG00000022786	r3hcc1	99	65.654	ENSPREG00000000713	r3hcc1	92	64.720	Poecilia_reticulata
ENSSDUG00000022786	r3hcc1	59	42.953	ENSPPYG00000018436	R3HCC1	59	45.802	Pongo_abelii
ENSSDUG00000022786	r3hcc1	63	47.287	ENSPCAG00000012229	R3HCC1	61	47.287	Procavia_capensis
ENSSDUG00000022786	r3hcc1	97	33.110	ENSPCOG00000027554	R3HCC1	57	51.807	Propithecus_coquereli
ENSSDUG00000022786	r3hcc1	99	33.623	ENSPVAG00000009829	R3HCC1	94	32.548	Pteropus_vampyrus
ENSSDUG00000022786	r3hcc1	95	48.529	ENSPNAG00000023875	r3hcc1	99	48.662	Pygocentrus_nattereri
ENSSDUG00000022786	r3hcc1	74	44.654	ENSRNOG00000016777	AABR07018321.1	53	41.618	Rattus_norvegicus
ENSSDUG00000022786	r3hcc1	55	51.807	ENSRBIG00000028045	R3HCC1	96	32.000	Rhinopithecus_bieti
ENSSDUG00000022786	r3hcc1	55	51.807	ENSRROG00000031126	R3HCC1	55	51.807	Rhinopithecus_roxellana
ENSSDUG00000022786	r3hcc1	93	49.140	ENSSFOG00015013507	r3hcc1	100	47.666	Scleropages_formosus
ENSSDUG00000022786	r3hcc1	94	82.469	ENSSMAG00000008647	r3hcc1	100	82.469	Scophthalmus_maximus
ENSSDUG00000022786	r3hcc1	100	98.372	ENSSLDG00000019031	r3hcc1	100	98.372	Seriola_lalandi_dorsalis
ENSSDUG00000022786	r3hcc1	97	69.928	ENSSPAG00000013497	r3hcc1	100	68.735	Stegastes_partitus
ENSSDUG00000022786	r3hcc1	71	45.890	ENSSSCG00000039915	-	62	48.855	Sus_scrofa
ENSSDUG00000022786	r3hcc1	64	43.939	ENSSSCG00000037347	-	56	43.182	Sus_scrofa
ENSSDUG00000022786	r3hcc1	97	54.785	ENSTRUG00000015880	r3hcc1	99	54.306	Takifugu_rubripes
ENSSDUG00000022786	r3hcc1	96	59.611	ENSXCOG00000017626	r3hcc1	90	59.611	Xiphophorus_couchianus
ENSSDUG00000022786	r3hcc1	99	66.589	ENSXMAG00000018375	r3hcc1	92	66.589	Xiphophorus_maculatus