EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000022843 (Gene tree)
Gene ID: 111234872
Gene Symbol: npm3
Alias: cb581|fb75f02|sb:cb581|wu:fb75f02|zgc:113084
Full Name: nucleophosmin/nucleoplasmin 3
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 2705 bases
Position: chrBDQW01000024.1:376146-378850
Accession: 111234872
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000031769	Nucleoplasmin	PF03066.15	4.4e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000032319	-	1347	XM_022763071	ENSSDUP00000031769	162 (aa)	XP_022618792	UPI000BBE0A07

Gene Model

Click here to download ENSSDUG00000022843's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022843's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022843	npm3	87	51.064	ENSG00000107833	NPM3	79	51.064	Homo_sapiens
ENSSDUG00000022843	npm3	100	85.366	ENSAPOG00000013083	npm3	100	83.537	Acanthochromis_polyacanthus
ENSSDUG00000022843	npm3	87	51.064	ENSAMEG00000017639	-	79	51.064	Ailuropoda_melanoleuca
ENSSDUG00000022843	npm3	94	43.125	ENSAMEG00000019414	-	94	43.125	Ailuropoda_melanoleuca
ENSSDUG00000022843	npm3	94	78.289	ENSACIG00000022586	npm3	90	74.342	Amphilophus_citrinellus
ENSSDUG00000022843	npm3	100	85.185	ENSAOCG00000009376	npm3	100	85.185	Amphiprion_ocellaris
ENSSDUG00000022843	npm3	100	85.185	ENSAPEG00000015863	npm3	100	85.185	Amphiprion_percula
ENSSDUG00000022843	npm3	100	84.663	ENSATEG00000022752	npm3	100	87.117	Anabas_testudineus
ENSSDUG00000022843	npm3	86	51.429	ENSAPLG00000010935	NPM3	90	50.714	Anas_platyrhynchos
ENSSDUG00000022843	npm3	98	48.447	ENSACAG00000011936	NPM3	98	48.447	Anolis_carolinensis
ENSSDUG00000022843	npm3	69	51.786	ENSANAG00000023832	-	51	52.778	Aotus_nancymaae
ENSSDUG00000022843	npm3	72	50.862	ENSANAG00000023070	-	71	51.786	Aotus_nancymaae
ENSSDUG00000022843	npm3	85	46.377	ENSANAG00000033290	-	78	45.324	Aotus_nancymaae
ENSSDUG00000022843	npm3	89	50.694	ENSANAG00000027082	-	80	51.408	Aotus_nancymaae
ENSSDUG00000022843	npm3	100	83.951	ENSACLG00000007854	npm3	100	83.951	Astatotilapia_calliptera
ENSSDUG00000022843	npm3	67	87.963	ENSAMXG00000039828	npm3	57	87.273	Astyanax_mexicanus
ENSSDUG00000022843	npm3	89	52.083	ENSBTAG00000016335	NPM3	61	55.556	Bos_taurus
ENSSDUG00000022843	npm3	89	50.694	ENSCJAG00000017650	NPM3	80	51.408	Callithrix_jacchus
ENSSDUG00000022843	npm3	87	51.064	ENSCAFG00000009919	NPM3	53	55.556	Canis_familiaris
ENSSDUG00000022843	npm3	87	51.064	ENSCAFG00020009185	NPM3	61	55.556	Canis_lupus_dingo
ENSSDUG00000022843	npm3	91	34.459	ENSCHIG00000016052	-	65	38.393	Capra_hircus
ENSSDUG00000022843	npm3	89	52.778	ENSCHIG00000024055	-	61	55.556	Capra_hircus
ENSSDUG00000022843	npm3	73	36.975	ENSCAPG00000016606	NPM3	54	38.824	Cavia_aperea
ENSSDUG00000022843	npm3	92	47.651	ENSCPOG00000006301	NPM3	64	55.556	Cavia_porcellus
ENSSDUG00000022843	npm3	85	45.985	ENSCCAG00000029457	-	78	45.324	Cebus_capucinus
ENSSDUG00000022843	npm3	89	50.694	ENSCCAG00000031043	-	80	51.408	Cebus_capucinus
ENSSDUG00000022843	npm3	87	51.064	ENSCATG00000013755	NPM3	79	51.064	Cercocebus_atys
ENSSDUG00000022843	npm3	87	51.064	ENSCSAG00000005509	NPM3	79	51.064	Chlorocebus_sabaeus
ENSSDUG00000022843	npm3	99	44.099	ENSCPBG00000003817	NPM3	87	46.528	Chrysemys_picta_bellii
ENSSDUG00000022843	npm3	91	50.000	ENSCANG00000020300	NPM3	84	50.000	Colobus_angolensis_palliatus
ENSSDUG00000022843	npm3	67	56.481	ENSCGRG00001013345	Npm3	61	57.547	Cricetulus_griseus_chok1gshd
ENSSDUG00000022843	npm3	63	57.843	ENSCGRG00000015351	Npm3	63	57.843	Cricetulus_griseus_crigri
ENSSDUG00000022843	npm3	100	82.840	ENSCSEG00000007944	npm3	100	81.657	Cynoglossus_semilaevis
ENSSDUG00000022843	npm3	78	78.462	ENSCVAG00000003305	npm3	100	72.289	Cyprinodon_variegatus
ENSSDUG00000022843	npm3	99	75.926	ENSDARG00000103594	npm3	99	75.926	Danio_rerio
ENSSDUG00000022843	npm3	93	48.718	ENSDORG00000003491	Npm3	86	49.351	Dipodomys_ordii
ENSSDUG00000022843	npm3	89	49.306	ENSETEG00000006307	NPM3	80	50.000	Echinops_telfairi
ENSSDUG00000022843	npm3	87	51.064	ENSEASG00005008834	NPM3	79	51.064	Equus_asinus_asinus
ENSSDUG00000022843	npm3	87	51.064	ENSECAG00000007524	NPM3	79	51.064	Equus_caballus
ENSSDUG00000022843	npm3	78	81.102	ENSELUG00000021730	npm3	92	73.548	Esox_lucius
ENSSDUG00000022843	npm3	89	50.000	ENSFCAG00000007178	NPM3	80	50.704	Felis_catus
ENSSDUG00000022843	npm3	85	50.725	ENSFALG00000008586	NPM3	85	48.921	Ficedula_albicollis
ENSSDUG00000022843	npm3	65	50.000	ENSFDAG00000016537	NPM3	70	58.904	Fukomys_damarensis
ENSSDUG00000022843	npm3	83	84.328	ENSFHEG00000003983	npm3	100	75.309	Fundulus_heteroclitus
ENSSDUG00000022843	npm3	94	78.289	ENSGMOG00000004317	npm3	97	78.289	Gadus_morhua
ENSSDUG00000022843	npm3	88	51.408	ENSGALG00000032329	NPM3	95	51.408	Gallus_gallus
ENSSDUG00000022843	npm3	77	79.200	ENSGAFG00000009135	npm3	100	73.457	Gambusia_affinis
ENSSDUG00000022843	npm3	99	76.647	ENSGACG00000007294	npm3	97	76.647	Gasterosteus_aculeatus
ENSSDUG00000022843	npm3	85	46.715	ENSGAGG00000004081	NPM3	76	46.715	Gopherus_agassizii
ENSSDUG00000022843	npm3	87	51.064	ENSGGOG00000027500	NPM3	79	51.064	Gorilla_gorilla
ENSSDUG00000022843	npm3	100	83.333	ENSHBUG00000023704	npm3	100	82.099	Haplochromis_burtoni
ENSSDUG00000022843	npm3	87	50.355	ENSHGLG00000019118	NPM3	64	56.481	Heterocephalus_glaber_female
ENSSDUG00000022843	npm3	83	50.746	ENSHGLG00100010926	NPM3	79	57.426	Heterocephalus_glaber_male
ENSSDUG00000022843	npm3	100	78.916	ENSHCOG00000019322	npm3	98	80.723	Hippocampus_comes
ENSSDUG00000022843	npm3	99	73.913	ENSIPUG00000008204	npm3	99	73.913	Ictalurus_punctatus
ENSSDUG00000022843	npm3	94	48.366	ENSSTOG00000022621	NPM3	85	49.007	Ictidomys_tridecemlineatus
ENSSDUG00000022843	npm3	69	55.357	ENSJJAG00000018907	Npm3	61	56.481	Jaculus_jaculus
ENSSDUG00000022843	npm3	99	73.810	ENSKMAG00000020800	npm3	99	73.373	Kryptolebias_marmoratus
ENSSDUG00000022843	npm3	100	83.951	ENSLBEG00000015651	npm3	100	83.951	Labrus_bergylta
ENSSDUG00000022843	npm3	100	70.122	ENSLOCG00000000705	-	99	68.293	Lepisosteus_oculatus
ENSSDUG00000022843	npm3	87	51.064	ENSLAFG00000023022	NPM3	80	51.064	Loxodonta_africana
ENSSDUG00000022843	npm3	87	51.064	ENSMFAG00000041878	NPM3	79	51.064	Macaca_fascicularis
ENSSDUG00000022843	npm3	92	48.993	ENSMMUG00000015774	NPM3	79	51.064	Macaca_mulatta
ENSSDUG00000022843	npm3	87	51.064	ENSMNEG00000039999	NPM3	79	51.064	Macaca_nemestrina
ENSSDUG00000022843	npm3	87	51.064	ENSMLEG00000038129	NPM3	79	51.064	Mandrillus_leucophaeus
ENSSDUG00000022843	npm3	99	84.472	ENSMAMG00000002698	npm3	99	84.472	Mastacembelus_armatus
ENSSDUG00000022843	npm3	100	83.951	ENSMZEG00005003091	npm3	100	80.864	Maylandia_zebra
ENSSDUG00000022843	npm3	67	55.556	ENSMAUG00000015218	Npm3	60	56.604	Mesocricetus_auratus
ENSSDUG00000022843	npm3	92	48.993	ENSMICG00000044119	NPM3	79	51.064	Microcebus_murinus
ENSSDUG00000022843	npm3	87	48.936	ENSMOCG00000013601	Npm3	62	55.660	Microtus_ochrogaster
ENSSDUG00000022843	npm3	100	86.420	ENSMMOG00000010681	npm3	100	86.420	Mola_mola
ENSSDUG00000022843	npm3	91	47.297	ENSMODG00000011689	NPM3	80	50.000	Monodelphis_domestica
ENSSDUG00000022843	npm3	100	79.412	ENSMALG00000016787	npm3	100	77.059	Monopterus_albus
ENSSDUG00000022843	npm3	67	53.704	MGP_CAROLIEiJ_G0023020	Npm3	61	54.717	Mus_caroli
ENSSDUG00000022843	npm3	67	52.778	ENSMUSG00000056209	Npm3	61	53.774	Mus_musculus
ENSSDUG00000022843	npm3	67	53.704	MGP_PahariEiJ_G0014510	Npm3	61	54.717	Mus_pahari
ENSSDUG00000022843	npm3	72	50.862	MGP_SPRETEiJ_G0023941	Npm3	65	51.754	Mus_spretus
ENSSDUG00000022843	npm3	69	54.464	ENSMPUG00000016894	NPM3	61	55.556	Mustela_putorius_furo
ENSSDUG00000022843	npm3	89	50.000	ENSMLUG00000004961	NPM3	81	50.000	Myotis_lucifugus
ENSSDUG00000022843	npm3	91	49.324	ENSNGAG00000022833	-	66	53.448	Nannospalax_galili
ENSSDUG00000022843	npm3	91	45.946	ENSNGAG00000000155	-	71	51.724	Nannospalax_galili
ENSSDUG00000022843	npm3	62	84.158	ENSNBRG00000009627	npm3	71	78.218	Neolamprologus_brichardi
ENSSDUG00000022843	npm3	87	48.936	ENSNLEG00000018637	-	79	48.936	Nomascus_leucogenys
ENSSDUG00000022843	npm3	87	51.064	ENSNLEG00000029281	-	79	51.064	Nomascus_leucogenys
ENSSDUG00000022843	npm3	65	56.604	ENSMEUG00000003465	-	80	55.455	Notamacropus_eugenii
ENSSDUG00000022843	npm3	61	45.455	ENSMEUG00000002619	-	100	45.455	Notamacropus_eugenii
ENSSDUG00000022843	npm3	61	43.434	ENSMEUG00000004931	-	100	44.444	Notamacropus_eugenii
ENSSDUG00000022843	npm3	87	50.355	ENSOPRG00000009229	NPM3	79	48.936	Ochotona_princeps
ENSSDUG00000022843	npm3	87	48.936	ENSODEG00000006704	NPM3	65	55.556	Octodon_degus
ENSSDUG00000022843	npm3	100	78.049	ENSONIG00000009513	npm3	99	80.488	Oreochromis_niloticus
ENSSDUG00000022843	npm3	87	49.645	ENSOCUG00000016819	NPM3	79	49.645	Oryctolagus_cuniculus
ENSSDUG00000022843	npm3	99	76.875	ENSORLG00000008492	npm3	100	75.000	Oryzias_latipes
ENSSDUG00000022843	npm3	99	77.500	ENSORLG00020002450	npm3	100	75.625	Oryzias_latipes_hni
ENSSDUG00000022843	npm3	99	77.500	ENSORLG00015006856	npm3	100	75.625	Oryzias_latipes_hsok
ENSSDUG00000022843	npm3	99	75.926	ENSOMEG00000002666	npm3	100	76.543	Oryzias_melastigma
ENSSDUG00000022843	npm3	88	50.704	ENSOGAG00000010001	NPM3	80	50.704	Otolemur_garnettii
ENSSDUG00000022843	npm3	89	52.778	ENSOARG00000016916	NPM3	61	55.556	Ovis_aries
ENSSDUG00000022843	npm3	87	51.064	ENSPPAG00000040517	NPM3	79	51.064	Pan_paniscus
ENSSDUG00000022843	npm3	89	50.000	ENSPPRG00000012611	-	81	50.000	Panthera_pardus
ENSSDUG00000022843	npm3	89	50.000	ENSPTIG00000005390	NPM3	80	50.704	Panthera_tigris_altaica
ENSSDUG00000022843	npm3	87	51.064	ENSPTRG00000002875	NPM3	79	51.064	Pan_troglodytes
ENSSDUG00000022843	npm3	87	51.064	ENSPANG00000021046	NPM3	79	51.064	Papio_anubis
ENSSDUG00000022843	npm3	89	60.417	ENSPKIG00000007609	npm3	66	63.415	Paramormyrops_kingsleyae
ENSSDUG00000022843	npm3	99	74.233	ENSPMGG00000020204	npm3	99	77.301	Periophthalmus_magnuspinnatus
ENSSDUG00000022843	npm3	86	52.143	ENSPEMG00000007731	Npm3	60	55.660	Peromyscus_maniculatus_bairdii
ENSSDUG00000022843	npm3	78	81.102	ENSPFOG00000014692	npm3	100	76.074	Poecilia_formosa
ENSSDUG00000022843	npm3	78	81.102	ENSPLAG00000009956	npm3	100	76.074	Poecilia_latipinna
ENSSDUG00000022843	npm3	68	82.143	ENSPMEG00000011795	npm3	92	75.362	Poecilia_mexicana
ENSSDUG00000022843	npm3	77	82.258	ENSPREG00000020765	npm3	100	76.687	Poecilia_reticulata
ENSSDUG00000022843	npm3	87	51.748	ENSPPYG00000002589	NPM3	52	55.556	Pongo_abelii
ENSSDUG00000022843	npm3	87	51.064	ENSPCOG00000014704	NPM3	79	51.064	Propithecus_coquereli
ENSSDUG00000022843	npm3	87	51.773	ENSPVAG00000004038	NPM3	79	51.773	Pteropus_vampyrus
ENSSDUG00000022843	npm3	100	85.185	ENSPNYG00000009300	npm3	100	81.481	Pundamilia_nyererei
ENSSDUG00000022843	npm3	99	73.913	ENSPNAG00000014779	npm3	99	73.913	Pygocentrus_nattereri
ENSSDUG00000022843	npm3	67	54.630	ENSRNOG00000017622	Npm3	61	55.660	Rattus_norvegicus
ENSSDUG00000022843	npm3	87	51.064	ENSRBIG00000039086	-	79	51.064	Rhinopithecus_bieti
ENSSDUG00000022843	npm3	94	49.020	ENSRBIG00000042048	-	86	50.725	Rhinopithecus_bieti
ENSSDUG00000022843	npm3	87	51.064	ENSRROG00000029912	NPM3	79	51.064	Rhinopithecus_roxellana
ENSSDUG00000022843	npm3	85	51.095	ENSSBOG00000027661	NPM3	64	55.556	Saimiri_boliviensis_boliviensis
ENSSDUG00000022843	npm3	91	48.649	ENSSHAG00000008567	NPM3	81	46.622	Sarcophilus_harrisii
ENSSDUG00000022843	npm3	99	65.839	ENSSFOG00015013651	npm3	99	67.081	Scleropages_formosus
ENSSDUG00000022843	npm3	100	88.272	ENSSMAG00000003907	npm3	100	87.037	Scophthalmus_maximus
ENSSDUG00000022843	npm3	100	98.765	ENSSLDG00000002811	npm3	100	98.765	Seriola_lalandi_dorsalis
ENSSDUG00000022843	npm3	87	51.034	ENSSPUG00000011875	NPM3	89	50.000	Sphenodon_punctatus
ENSSDUG00000022843	npm3	100	83.951	ENSSPAG00000002553	npm3	100	83.951	Stegastes_partitus
ENSSDUG00000022843	npm3	87	51.064	ENSSSCG00000010568	NPM3	79	51.064	Sus_scrofa
ENSSDUG00000022843	npm3	64	55.769	ENSTGUG00000009948	NPM3	79	55.769	Taeniopygia_guttata
ENSSDUG00000022843	npm3	100	84.568	ENSTRUG00000011661	npm3	100	80.247	Takifugu_rubripes
ENSSDUG00000022843	npm3	81	84.733	ENSTNIG00000016518	npm3	72	85.714	Tetraodon_nigroviridis
ENSSDUG00000022843	npm3	89	50.000	ENSUAMG00000024072	NPM3	59	50.000	Ursus_americanus
ENSSDUG00000022843	npm3	89	50.000	ENSUMAG00000023016	NPM3	59	50.000	Ursus_maritimus
ENSSDUG00000022843	npm3	87	53.191	ENSVPAG00000003120	NPM3	61	55.556	Vicugna_pacos
ENSSDUG00000022843	npm3	87	51.064	ENSVVUG00000000945	NPM3	53	55.556	Vulpes_vulpes
ENSSDUG00000022843	npm3	88	54.000	ENSXETG00000014472	npm3	87	57.718	Xenopus_tropicalis
ENSSDUG00000022843	npm3	83	82.090	ENSXCOG00000012121	npm3	99	71.515	Xiphophorus_couchianus
ENSSDUG00000022843	npm3	83	82.090	ENSXMAG00000013473	npm3	99	71.515	Xiphophorus_maculatus