EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000022892 (Gene tree)
Gene ID: 111234918
Gene Symbol: apex2
Alias: zgc:55889
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 2
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3127 bases
Position: chrBDQW01000468.1:574979-578105
Accession: 111234918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000031848	Exo_endo_phos	PF03372.23	4.3e-14	1	1
ENSSDUP00000031850	Exo_endo_phos	PF03372.23	4.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000032400	-	1665	-	ENSSDUP00000031850	554 (aa)	-	-
ENSSDUT00000032398	-	1740	XM_022763134	ENSSDUP00000031848	579 (aa)	XP_022618855	-

Gene Model

Click here to download ENSSDUG00000022892's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022892's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022892	apex2	99	45.841	ENSG00000169188	APEX2	99	45.487	Homo_sapiens
ENSSDUG00000022892	apex2	100	79.417	ENSAPOG00000005805	apex2	100	79.417	Acanthochromis_polyacanthus
ENSSDUG00000022892	apex2	99	45.390	ENSAMEG00000003608	APEX2	99	45.115	Ailuropoda_melanoleuca
ENSSDUG00000022892	apex2	100	78.902	ENSACIG00000010000	apex2	100	78.902	Amphilophus_citrinellus
ENSSDUG00000022892	apex2	100	80.274	ENSAOCG00000021774	apex2	100	80.274	Amphiprion_ocellaris
ENSSDUG00000022892	apex2	100	80.274	ENSAPEG00000020890	apex2	94	80.274	Amphiprion_percula
ENSSDUG00000022892	apex2	100	81.132	ENSATEG00000023600	apex2	100	81.132	Anabas_testudineus
ENSSDUG00000022892	apex2	99	49.820	ENSACAG00000011201	APEX2	99	48.381	Anolis_carolinensis
ENSSDUG00000022892	apex2	97	40.761	ENSANAG00000020845	-	99	40.580	Aotus_nancymaae
ENSSDUG00000022892	apex2	99	46.195	ENSANAG00000021907	-	99	45.841	Aotus_nancymaae
ENSSDUG00000022892	apex2	100	63.894	ENSAMXG00000007422	apex2	100	63.894	Astyanax_mexicanus
ENSSDUG00000022892	apex2	99	45.648	ENSBTAG00000013177	APEX2	99	45.648	Bos_taurus
ENSSDUG00000022892	apex2	99	45.487	ENSCJAG00000016584	APEX2	99	45.133	Callithrix_jacchus
ENSSDUG00000022892	apex2	99	44.583	ENSCAFG00000014310	APEX2	99	44.405	Canis_familiaris
ENSSDUG00000022892	apex2	99	45.471	ENSCAFG00020013818	APEX2	94	56.637	Canis_lupus_dingo
ENSSDUG00000022892	apex2	99	45.841	ENSCHIG00000019916	APEX2	99	46.549	Capra_hircus
ENSSDUG00000022892	apex2	99	45.423	ENSTSYG00000005612	APEX2	99	45.423	Carlito_syrichta
ENSSDUG00000022892	apex2	99	45.115	ENSCPOG00000007265	APEX2	99	45.293	Cavia_porcellus
ENSSDUG00000022892	apex2	96	41.231	ENSCCAG00000025405	-	96	41.231	Cebus_capucinus
ENSSDUG00000022892	apex2	99	44.956	ENSCATG00000044854	APEX2	99	44.602	Cercocebus_atys
ENSSDUG00000022892	apex2	99	45.826	ENSCLAG00000017315	APEX2	99	45.310	Chinchilla_lanigera
ENSSDUG00000022892	apex2	99	45.133	ENSCSAG00000012124	APEX2	99	44.779	Chlorocebus_sabaeus
ENSSDUG00000022892	apex2	100	46.679	ENSCPBG00000016631	APEX2	95	54.223	Chrysemys_picta_bellii
ENSSDUG00000022892	apex2	79	54.430	ENSCSAVG00000006052	-	93	54.430	Ciona_savignyi
ENSSDUG00000022892	apex2	99	45.487	ENSCANG00000003053	APEX2	99	45.487	Colobus_angolensis_palliatus
ENSSDUG00000022892	apex2	99	45.745	ENSCGRG00001008132	Apex2	99	45.390	Cricetulus_griseus_chok1gshd
ENSSDUG00000022892	apex2	99	45.745	ENSCGRG00000009667	Apex2	86	59.716	Cricetulus_griseus_crigri
ENSSDUG00000022892	apex2	100	75.000	ENSCSEG00000019900	apex2	99	74.315	Cynoglossus_semilaevis
ENSSDUG00000022892	apex2	100	75.171	ENSCVAG00000021583	apex2	100	75.171	Cyprinodon_variegatus
ENSSDUG00000022892	apex2	100	64.021	ENSDARG00000008472	apex2	100	63.540	Danio_rerio
ENSSDUG00000022892	apex2	99	45.009	ENSDNOG00000038901	APEX2	99	45.009	Dasypus_novemcinctus
ENSSDUG00000022892	apex2	76	58.108	ENSEBUG00000015654	apex2	86	58.108	Eptatretus_burgeri
ENSSDUG00000022892	apex2	99	45.922	ENSEASG00005011694	APEX2	90	45.390	Equus_asinus_asinus
ENSSDUG00000022892	apex2	99	45.922	ENSECAG00000026921	APEX2	90	45.390	Equus_caballus
ENSSDUG00000022892	apex2	99	45.343	ENSEEUG00000013172	APEX2	99	44.815	Erinaceus_europaeus
ENSSDUG00000022892	apex2	100	67.406	ENSELUG00000021417	apex2	99	67.235	Esox_lucius
ENSSDUG00000022892	apex2	99	44.583	ENSFCAG00000021990	APEX2	99	44.583	Felis_catus
ENSSDUG00000022892	apex2	99	44.760	ENSFDAG00000008076	APEX2	90	60.849	Fukomys_damarensis
ENSSDUG00000022892	apex2	100	67.621	ENSFHEG00000021411	apex2	99	67.621	Fundulus_heteroclitus
ENSSDUG00000022892	apex2	67	82.778	ENSGMOG00000019681	apex2	100	83.889	Gadus_morhua
ENSSDUG00000022892	apex2	100	71.527	ENSGAFG00000005829	apex2	100	71.184	Gambusia_affinis
ENSSDUG00000022892	apex2	65	90.341	ENSGACG00000012307	apex2	92	88.827	Gasterosteus_aculeatus
ENSSDUG00000022892	apex2	90	44.356	ENSGAGG00000011520	APEX2	88	43.960	Gopherus_agassizii
ENSSDUG00000022892	apex2	99	45.664	ENSGGOG00000002056	APEX2	99	45.487	Gorilla_gorilla
ENSSDUG00000022892	apex2	100	77.187	ENSHBUG00000009938	apex2	100	77.702	Haplochromis_burtoni
ENSSDUG00000022892	apex2	99	45.471	ENSHGLG00000000273	APEX2	99	56.034	Heterocephalus_glaber_female
ENSSDUG00000022892	apex2	100	70.939	ENSHCOG00000010165	apex2	100	70.939	Hippocampus_comes
ENSSDUG00000022892	apex2	100	61.591	ENSIPUG00000000352	APEX2	100	61.421	Ictalurus_punctatus
ENSSDUG00000022892	apex2	99	44.938	ENSSTOG00000025121	APEX2	86	59.906	Ictidomys_tridecemlineatus
ENSSDUG00000022892	apex2	99	45.150	ENSJJAG00000019611	Apex2	93	59.346	Jaculus_jaculus
ENSSDUG00000022892	apex2	100	74.271	ENSKMAG00000006985	apex2	100	73.928	Kryptolebias_marmoratus
ENSSDUG00000022892	apex2	100	79.760	ENSLBEG00000012139	apex2	100	79.760	Labrus_bergylta
ENSSDUG00000022892	apex2	100	49.479	ENSLACG00000000865	APEX2	100	49.306	Latimeria_chalumnae
ENSSDUG00000022892	apex2	100	59.386	ENSLOCG00000014467	apex2	100	61.336	Lepisosteus_oculatus
ENSSDUG00000022892	apex2	99	45.293	ENSLAFG00000018312	APEX2	99	44.602	Loxodonta_africana
ENSSDUG00000022892	apex2	99	44.583	ENSMFAG00000002486	APEX2	99	44.760	Macaca_fascicularis
ENSSDUG00000022892	apex2	99	44.760	ENSMMUG00000008428	APEX2	99	44.938	Macaca_mulatta
ENSSDUG00000022892	apex2	99	44.583	ENSMNEG00000036783	APEX2	99	44.760	Macaca_nemestrina
ENSSDUG00000022892	apex2	99	44.956	ENSMLEG00000028208	APEX2	99	44.602	Mandrillus_leucophaeus
ENSSDUG00000022892	apex2	100	80.274	ENSMAMG00000024220	apex2	100	79.417	Mastacembelus_armatus
ENSSDUG00000022892	apex2	100	77.015	ENSMZEG00005026322	apex2	100	77.530	Maylandia_zebra
ENSSDUG00000022892	apex2	99	44.602	ENSMICG00000043181	APEX2	99	44.602	Microcebus_murinus
ENSSDUG00000022892	apex2	99	45.374	ENSMOCG00000004339	Apex2	88	59.242	Microtus_ochrogaster
ENSSDUG00000022892	apex2	100	76.027	ENSMMOG00000017340	apex2	100	76.027	Mola_mola
ENSSDUG00000022892	apex2	99	51.543	ENSMODG00000005341	APEX2	99	51.361	Monodelphis_domestica
ENSSDUG00000022892	apex2	100	81.865	ENSMALG00000014179	apex2	100	81.865	Monopterus_albus
ENSSDUG00000022892	apex2	99	45.789	MGP_CAROLIEiJ_G0033484	Apex2	100	51.601	Mus_caroli
ENSSDUG00000022892	apex2	99	46.004	ENSMUSG00000025269	Apex2	99	51.601	Mus_musculus
ENSSDUG00000022892	apex2	99	46.536	MGP_PahariEiJ_G0032023	Apex2	93	60.190	Mus_pahari
ENSSDUG00000022892	apex2	99	46.359	MGP_SPRETEiJ_G0034654	Apex2	100	51.601	Mus_spretus
ENSSDUG00000022892	apex2	99	45.826	ENSMPUG00000003293	APEX2	99	45.826	Mustela_putorius_furo
ENSSDUG00000022892	apex2	99	45.201	ENSMLUG00000004562	-	99	45.133	Myotis_lucifugus
ENSSDUG00000022892	apex2	99	45.357	ENSMLUG00000016298	-	99	45.357	Myotis_lucifugus
ENSSDUG00000022892	apex2	99	44.306	ENSNGAG00000013576	Apex2	99	44.840	Nannospalax_galili
ENSSDUG00000022892	apex2	100	77.187	ENSNBRG00000010099	apex2	100	77.702	Neolamprologus_brichardi
ENSSDUG00000022892	apex2	72	52.239	ENSNLEG00000032067	-	91	51.866	Nomascus_leucogenys
ENSSDUG00000022892	apex2	99	78.843	ENSONIG00000016881	apex2	100	78.045	Oreochromis_niloticus
ENSSDUG00000022892	apex2	93	54.615	ENSOANG00000000689	-	96	54.876	Ornithorhynchus_anatinus
ENSSDUG00000022892	apex2	81	57.944	ENSOCUG00000000570	APEX2	82	58.491	Oryctolagus_cuniculus
ENSSDUG00000022892	apex2	100	71.951	ENSORLG00000014053	apex2	100	71.254	Oryzias_latipes
ENSSDUG00000022892	apex2	100	71.603	ENSORLG00020013253	apex2	100	71.080	Oryzias_latipes_hni
ENSSDUG00000022892	apex2	100	71.603	ENSORLG00015007515	apex2	100	70.906	Oryzias_latipes_hsok
ENSSDUG00000022892	apex2	100	74.159	ENSOMEG00000003655	apex2	100	73.451	Oryzias_melastigma
ENSSDUG00000022892	apex2	99	45.293	ENSOGAG00000007797	APEX2	99	45.115	Otolemur_garnettii
ENSSDUG00000022892	apex2	99	45.841	ENSOARG00000005742	APEX2	99	46.549	Ovis_aries
ENSSDUG00000022892	apex2	99	46.018	ENSPPAG00000035747	APEX2	99	45.664	Pan_paniscus
ENSSDUG00000022892	apex2	99	44.583	ENSPPRG00000002440	APEX2	99	44.583	Panthera_pardus
ENSSDUG00000022892	apex2	99	44.405	ENSPTIG00000021651	APEX2	99	44.227	Panthera_tigris_altaica
ENSSDUG00000022892	apex2	99	46.018	ENSPTRG00000021946	APEX2	99	45.664	Pan_troglodytes
ENSSDUG00000022892	apex2	99	44.956	ENSPANG00000003595	APEX2	99	44.602	Papio_anubis
ENSSDUG00000022892	apex2	100	63.604	ENSPKIG00000007752	apex2	100	64.021	Paramormyrops_kingsleyae
ENSSDUG00000022892	apex2	100	71.705	ENSPMGG00000009151	apex2	100	71.705	Periophthalmus_magnuspinnatus
ENSSDUG00000022892	apex2	99	45.745	ENSPEMG00000016475	Apex2	89	58.257	Peromyscus_maniculatus_bairdii
ENSSDUG00000022892	apex2	86	70.968	ENSPCIG00000007633	APEX2	98	50.717	Phascolarctos_cinereus
ENSSDUG00000022892	apex2	100	72.213	ENSPFOG00000000408	apex2	100	72.041	Poecilia_formosa
ENSSDUG00000022892	apex2	100	72.213	ENSPLAG00000023814	apex2	100	72.041	Poecilia_latipinna
ENSSDUG00000022892	apex2	100	71.698	ENSPMEG00000023222	apex2	100	71.527	Poecilia_mexicana
ENSSDUG00000022892	apex2	99	45.310	ENSPPYG00000020388	APEX2	99	45.133	Pongo_abelii
ENSSDUG00000022892	apex2	99	46.195	ENSPCOG00000016083	APEX2	99	46.195	Propithecus_coquereli
ENSSDUG00000022892	apex2	92	45.525	ENSPVAG00000007851	APEX2	99	45.331	Pteropus_vampyrus
ENSSDUG00000022892	apex2	100	77.015	ENSPNYG00000015698	apex2	100	77.530	Pundamilia_nyererei
ENSSDUG00000022892	apex2	100	62.034	ENSPNAG00000011666	apex2	100	61.735	Pygocentrus_nattereri
ENSSDUG00000022892	apex2	99	45.196	ENSRNOG00000000166	Apex2	99	44.840	Rattus_norvegicus
ENSSDUG00000022892	apex2	99	45.310	ENSRBIG00000036500	APEX2	99	44.425	Rhinopithecus_bieti
ENSSDUG00000022892	apex2	99	45.310	ENSRROG00000032674	APEX2	99	45.310	Rhinopithecus_roxellana
ENSSDUG00000022892	apex2	70	46.000	YBL019W	APN2	76	46.000	Saccharomyces_cerevisiae
ENSSDUG00000022892	apex2	96	37.873	ENSSBOG00000003489	-	96	37.500	Saimiri_boliviensis_boliviensis
ENSSDUG00000022892	apex2	99	45.293	ENSSBOG00000030500	-	99	46.018	Saimiri_boliviensis_boliviensis
ENSSDUG00000022892	apex2	99	52.813	ENSSHAG00000007846	APEX2	99	51.906	Sarcophilus_harrisii
ENSSDUG00000022892	apex2	85	83.582	ENSSFOG00015010354	apex2	98	77.922	Scleropages_formosus
ENSSDUG00000022892	apex2	100	77.565	ENSSMAG00000012753	apex2	100	78.336	Scophthalmus_maximus
ENSSDUG00000022892	apex2	100	98.456	ENSSLDG00000024347	apex2	100	98.456	Seriola_lalandi_dorsalis
ENSSDUG00000022892	apex2	99	45.406	ENSSARG00000010297	APEX2	99	45.567	Sorex_araneus
ENSSDUG00000022892	apex2	100	81.475	ENSSPAG00000016279	apex2	100	81.475	Stegastes_partitus
ENSSDUG00000022892	apex2	99	46.181	ENSSSCG00000012348	-	99	46.181	Sus_scrofa
ENSSDUG00000022892	apex2	100	72.935	ENSTRUG00000015660	apex2	100	73.286	Takifugu_rubripes
ENSSDUG00000022892	apex2	85	69.639	ENSTNIG00000003725	apex2	100	69.520	Tetraodon_nigroviridis
ENSSDUG00000022892	apex2	92	45.793	ENSTBEG00000010520	APEX2	99	45.793	Tupaia_belangeri
ENSSDUG00000022892	apex2	99	45.293	ENSUAMG00000004720	APEX2	94	57.080	Ursus_americanus
ENSSDUG00000022892	apex2	99	43.060	ENSUMAG00000002892	APEX2	99	43.694	Ursus_maritimus
ENSSDUG00000022892	apex2	99	45.115	ENSVVUG00000005989	APEX2	99	44.938	Vulpes_vulpes
ENSSDUG00000022892	apex2	99	52.509	ENSXETG00000022026	apex2	99	52.151	Xenopus_tropicalis
ENSSDUG00000022892	apex2	100	72.041	ENSXMAG00000025740	apex2	100	72.041	Xiphophorus_maculatus