EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000023117 (Gene tree)
Gene ID: 111219982
Gene Symbol: eif3c
Alias: eif3s8|fi37c04|wu:fb34a08|wu:fi37c04|zgc:66128
Full Name: eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 10439 bases
Position: chrBDQW01000068.1:11447865-11458303
Accession: 111219982
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000032186	eIF-3c_N	PF05470.12	1.9e-249	1	1
ENSSDUP00000032191	eIF-3c_N	PF05470.12	3.5e-247	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000032739	-	4920	XM_022742879	ENSSDUP00000032186	928 (aa)	XP_022598600	UPI000BBE9AFF
ENSSDUT00000032744	-	2601	-	ENSSDUP00000032191	866 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000023117's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000023117's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000023117	eif3c	98	76.714	ENSG00000205609	EIF3CL	97	79.825	Homo_sapiens
ENSSDUG00000023117	eif3c	98	76.471	ENSG00000184110	EIF3C	100	84.810	Homo_sapiens
ENSSDUG00000023117	eif3c	100	96.017	ENSAPOG00000024092	eif3c	100	96.017	Acanthochromis_polyacanthus
ENSSDUG00000023117	eif3c	98	76.580	ENSAMEG00000015454	-	97	79.649	Ailuropoda_melanoleuca
ENSSDUG00000023117	eif3c	100	85.023	ENSACIG00000015082	eif3c	100	85.050	Amphilophus_citrinellus
ENSSDUG00000023117	eif3c	100	96.878	ENSAOCG00000021466	eif3c	100	96.878	Amphiprion_ocellaris
ENSSDUG00000023117	eif3c	100	96.878	ENSAPEG00000010521	eif3c	100	96.878	Amphiprion_percula
ENSSDUG00000023117	eif3c	100	95.269	ENSATEG00000019001	eif3c	100	95.269	Anabas_testudineus
ENSSDUG00000023117	eif3c	95	83.634	ENSACAG00000005937	-	97	82.749	Anolis_carolinensis
ENSSDUG00000023117	eif3c	98	76.362	ENSANAG00000020640	-	99	75.922	Aotus_nancymaae
ENSSDUG00000023117	eif3c	89	92.869	ENSACLG00000009322	eif3c	93	92.869	Astatotilapia_calliptera
ENSSDUG00000023117	eif3c	100	87.386	ENSACLG00000009347	eif3c	100	87.386	Astatotilapia_calliptera
ENSSDUG00000023117	eif3c	100	87.487	ENSAMXG00000020949	eif3c	100	87.594	Astyanax_mexicanus
ENSSDUG00000023117	eif3c	100	80.240	ENSBTAG00000006543	EIF3CL	99	76.906	Bos_taurus
ENSSDUG00000023117	eif3c	99	42.004	WBGene00001226	eif-3.C	66	46.656	Caenorhabditis_elegans
ENSSDUG00000023117	eif3c	98	76.253	ENSCJAG00000006341	-	100	78.202	Callithrix_jacchus
ENSSDUG00000023117	eif3c	98	76.580	ENSCAFG00000017143	-	97	79.649	Canis_familiaris
ENSSDUG00000023117	eif3c	98	76.580	ENSCAFG00020017587	-	97	79.649	Canis_lupus_dingo
ENSSDUG00000023117	eif3c	97	81.891	ENSCHIG00000024795	-	99	76.906	Capra_hircus
ENSSDUG00000023117	eif3c	98	76.362	ENSTSYG00000003486	-	96	79.649	Carlito_syrichta
ENSSDUG00000023117	eif3c	96	69.276	ENSCAPG00000015887	-	99	69.490	Cavia_aperea
ENSSDUG00000023117	eif3c	98	76.362	ENSCPOG00000007533	-	97	79.124	Cavia_porcellus
ENSSDUG00000023117	eif3c	98	72.331	ENSCCAG00000027724	-	99	71.041	Cebus_capucinus
ENSSDUG00000023117	eif3c	100	74.972	ENSCCAG00000034928	-	100	74.642	Cebus_capucinus
ENSSDUG00000023117	eif3c	99	64.713	ENSCCAG00000029099	-	99	64.719	Cebus_capucinus
ENSSDUG00000023117	eif3c	98	76.528	ENSCATG00000032673	-	97	79.502	Cercocebus_atys
ENSSDUG00000023117	eif3c	98	76.144	ENSCLAG00000011094	-	99	76.253	Chinchilla_lanigera
ENSSDUG00000023117	eif3c	98	76.528	ENSCSAG00000006297	-	97	79.502	Chlorocebus_sabaeus
ENSSDUG00000023117	eif3c	58	68.340	ENSCHOG00000003120	-	88	68.340	Choloepus_hoffmanni
ENSSDUG00000023117	eif3c	67	87.898	ENSCPBG00000012407	-	94	73.184	Chrysemys_picta_bellii
ENSSDUG00000023117	eif3c	92	50.750	ENSCSAVG00000006744	-	99	50.687	Ciona_savignyi
ENSSDUG00000023117	eif3c	98	76.528	ENSCANG00000033626	-	97	79.502	Colobus_angolensis_palliatus
ENSSDUG00000023117	eif3c	98	75.682	ENSCGRG00001015265	EIF3C	99	75.896	Cricetulus_griseus_chok1gshd
ENSSDUG00000023117	eif3c	100	92.473	ENSCSEG00000017770	eif3c	100	92.258	Cynoglossus_semilaevis
ENSSDUG00000023117	eif3c	100	91.173	ENSCVAG00000005402	eif3c	100	91.819	Cyprinodon_variegatus
ENSSDUG00000023117	eif3c	100	90.216	ENSDARG00000016443	eif3c	100	88.330	Danio_rerio
ENSSDUG00000023117	eif3c	98	76.362	ENSDNOG00000031497	-	97	79.649	Dasypus_novemcinctus
ENSSDUG00000023117	eif3c	100	76.357	ENSDORG00000016471	Eif3c	100	76.557	Dipodomys_ordii
ENSSDUG00000023117	eif3c	96	51.893	FBgn0034258	eIF3c	97	51.542	Drosophila_melanogaster
ENSSDUG00000023117	eif3c	90	85.253	ENSETEG00000013527	-	91	85.253	Echinops_telfairi
ENSSDUG00000023117	eif3c	99	63.399	ENSEBUG00000001629	eif3c	99	63.755	Eptatretus_burgeri
ENSSDUG00000023117	eif3c	98	76.580	ENSECAG00000008746	-	97	79.416	Equus_caballus
ENSSDUG00000023117	eif3c	65	56.790	ENSEEUG00000000726	-	64	55.612	Erinaceus_europaeus
ENSSDUG00000023117	eif3c	86	76.463	ENSEEUG00000006148	-	99	76.456	Erinaceus_europaeus
ENSSDUG00000023117	eif3c	100	87.367	ENSELUG00000022257	eif3c	92	95.062	Esox_lucius
ENSSDUG00000023117	eif3c	98	76.688	ENSFCAG00000015782	-	97	79.795	Felis_catus
ENSSDUG00000023117	eif3c	100	75.788	ENSFDAG00000003588	-	97	79.270	Fukomys_damarensis
ENSSDUG00000023117	eif3c	100	91.845	ENSFHEG00000014154	EIF3C	100	91.738	Fundulus_heteroclitus
ENSSDUG00000023117	eif3c	96	89.888	ENSGMOG00000016885	eif3c	100	89.888	Gadus_morhua
ENSSDUG00000023117	eif3c	95	92.054	ENSGACG00000007652	eif3c	100	90.194	Gasterosteus_aculeatus
ENSSDUG00000023117	eif3c	83	85.621	ENSGAGG00000006666	-	97	80.673	Gopherus_agassizii
ENSSDUG00000023117	eif3c	98	75.137	ENSGGOG00000026919	EIF3C	97	79.356	Gorilla_gorilla
ENSSDUG00000023117	eif3c	98	76.253	ENSHGLG00000011445	EIF3C	97	78.978	Heterocephalus_glaber_female
ENSSDUG00000023117	eif3c	98	76.253	ENSHGLG00100000217	EIF3C	97	78.978	Heterocephalus_glaber_male
ENSSDUG00000023117	eif3c	100	91.173	ENSHCOG00000019694	eif3c	100	90.743	Hippocampus_comes
ENSSDUG00000023117	eif3c	95	93.789	ENSIPUG00000016878	eif3c	99	87.152	Ictalurus_punctatus
ENSSDUG00000023117	eif3c	98	76.580	ENSSTOG00000021278	-	99	77.015	Ictidomys_tridecemlineatus
ENSSDUG00000023117	eif3c	98	75.163	ENSJJAG00000012722	Eif3c	99	75.271	Jaculus_jaculus
ENSSDUG00000023117	eif3c	96	96.250	ENSKMAG00000021662	eif3c	100	90.542	Kryptolebias_marmoratus
ENSSDUG00000023117	eif3c	100	93.219	ENSLBEG00000023370	eif3c	100	91.173	Labrus_bergylta
ENSSDUG00000023117	eif3c	99	79.108	ENSLACG00000000770	eif3c	99	79.185	Latimeria_chalumnae
ENSSDUG00000023117	eif3c	98	76.144	ENSLAFG00000027426	-	97	79.356	Loxodonta_africana
ENSSDUG00000023117	eif3c	98	76.528	ENSMFAG00000041930	-	97	79.502	Macaca_fascicularis
ENSSDUG00000023117	eif3c	98	76.528	ENSMMUG00000011798	-	97	79.502	Macaca_mulatta
ENSSDUG00000023117	eif3c	98	76.528	ENSMNEG00000023915	-	97	79.502	Macaca_nemestrina
ENSSDUG00000023117	eif3c	98	76.528	ENSMLEG00000027529	-	97	79.502	Mandrillus_leucophaeus
ENSSDUG00000023117	eif3c	100	95.910	ENSMAMG00000012512	eif3c	100	95.910	Mastacembelus_armatus
ENSSDUG00000023117	eif3c	89	92.707	ENSMZEG00005013685	eif3c	93	92.707	Maylandia_zebra
ENSSDUG00000023117	eif3c	100	86.697	ENSMZEG00005013699	eif3c	94	95.625	Maylandia_zebra
ENSSDUG00000023117	eif3c	98	75.463	ENSMAUG00000010621	Eif3c	99	75.896	Mesocricetus_auratus
ENSSDUG00000023117	eif3c	98	76.471	ENSMICG00000036748	-	97	79.649	Microcebus_murinus
ENSSDUG00000023117	eif3c	98	74.264	ENSMOCG00000004204	Eif3c	98	78.832	Microtus_ochrogaster
ENSSDUG00000023117	eif3c	100	86.121	ENSMMOG00000001572	eif3c	99	91.909	Mola_mola
ENSSDUG00000023117	eif3c	100	75.884	ENSMODG00000015579	-	97	79.532	Monodelphis_domestica
ENSSDUG00000023117	eif3c	100	91.250	ENSMALG00000008907	eif3c	98	95.031	Monopterus_albus
ENSSDUG00000023117	eif3c	98	75.682	MGP_CAROLIEiJ_G0030451	Eif3c	98	78.686	Mus_caroli
ENSSDUG00000023117	eif3c	98	75.682	ENSMUSG00000030738	Eif3c	98	78.686	Mus_musculus
ENSSDUG00000023117	eif3c	98	75.573	MGP_PahariEiJ_G0013661	Eif3c	98	78.102	Mus_pahari
ENSSDUG00000023117	eif3c	98	75.682	MGP_SPRETEiJ_G0031565	Eif3c	98	78.686	Mus_spretus
ENSSDUG00000023117	eif3c	95	76.949	ENSMPUG00000012732	-	97	79.502	Mustela_putorius_furo
ENSSDUG00000023117	eif3c	98	75.676	ENSMLUG00000015558	-	99	75.813	Myotis_lucifugus
ENSSDUG00000023117	eif3c	98	75.926	ENSNGAG00000007177	-	96	79.356	Nannospalax_galili
ENSSDUG00000023117	eif3c	86	58.762	ENSNGAG00000010901	-	91	59.537	Nannospalax_galili
ENSSDUG00000023117	eif3c	100	68.590	ENSNLEG00000001425	-	100	68.527	Nomascus_leucogenys
ENSSDUG00000023117	eif3c	85	59.028	ENSMEUG00000005317	-	93	63.636	Notamacropus_eugenii
ENSSDUG00000023117	eif3c	100	63.090	ENSMEUG00000009939	-	99	63.197	Notamacropus_eugenii
ENSSDUG00000023117	eif3c	95	80.060	ENSOPRG00000000931	-	99	75.813	Ochotona_princeps
ENSSDUG00000023117	eif3c	98	76.253	ENSODEG00000013508	-	97	79.416	Octodon_degus
ENSSDUG00000023117	eif3c	70	72.787	ENSONIG00000011434	eif3c	100	72.787	Oreochromis_niloticus
ENSSDUG00000023117	eif3c	100	72.921	ENSOANG00000011410	-	100	72.564	Ornithorhynchus_anatinus
ENSSDUG00000023117	eif3c	98	76.253	ENSOCUG00000022489	-	97	79.649	Oryctolagus_cuniculus
ENSSDUG00000023117	eif3c	95	93.939	ENSORLG00000006318	eif3c	99	88.759	Oryzias_latipes
ENSSDUG00000023117	eif3c	97	89.258	ENSORLG00020015713	eif3c	99	94.968	Oryzias_latipes_hni
ENSSDUG00000023117	eif3c	97	89.037	ENSORLG00015013772	eif3c	100	88.651	Oryzias_latipes_hsok
ENSSDUG00000023117	eif3c	96	94.545	ENSOMEG00000020450	eif3c	100	90.205	Oryzias_melastigma
ENSSDUG00000023117	eif3c	98	76.471	ENSOGAG00000012737	-	99	76.247	Otolemur_garnettii
ENSSDUG00000023117	eif3c	98	75.926	ENSOARG00000002892	-	99	76.906	Ovis_aries
ENSSDUG00000023117	eif3c	98	76.688	ENSPPRG00000012336	-	97	79.795	Panthera_pardus
ENSSDUG00000023117	eif3c	98	76.688	ENSPTIG00000011712	-	97	79.795	Panthera_tigris_altaica
ENSSDUG00000023117	eif3c	98	76.528	ENSPANG00000021151	-	97	79.502	Papio_anubis
ENSSDUG00000023117	eif3c	100	88.223	ENSPKIG00000002049	eif3c	100	87.152	Paramormyrops_kingsleyae
ENSSDUG00000023117	eif3c	89	95.285	ENSPMGG00000005409	eif3c	100	82.651	Periophthalmus_magnuspinnatus
ENSSDUG00000023117	eif3c	98	75.791	ENSPEMG00000010899	Eif3c	100	73.927	Peromyscus_maniculatus_bairdii
ENSSDUG00000023117	eif3c	100	74.812	ENSPCIG00000025206	-	100	75.348	Phascolarctos_cinereus
ENSSDUG00000023117	eif3c	100	92.581	ENSPFOG00000004476	eif3c	100	92.366	Poecilia_formosa
ENSSDUG00000023117	eif3c	100	89.450	ENSPLAG00000017480	eif3c	100	92.334	Poecilia_latipinna
ENSSDUG00000023117	eif3c	100	92.680	ENSPMEG00000019512	eif3c	100	91.961	Poecilia_mexicana
ENSSDUG00000023117	eif3c	100	89.450	ENSPREG00000023139	eif3c	100	89.041	Poecilia_reticulata
ENSSDUG00000023117	eif3c	98	74.264	ENSPPYG00000007227	-	97	76.574	Pongo_abelii
ENSSDUG00000023117	eif3c	69	83.721	ENSPCAG00000012710	-	100	83.721	Procavia_capensis
ENSSDUG00000023117	eif3c	98	76.580	ENSPCOG00000019289	-	97	79.649	Propithecus_coquereli
ENSSDUG00000023117	eif3c	98	76.580	ENSPVAG00000005804	-	97	79.649	Pteropus_vampyrus
ENSSDUG00000023117	eif3c	66	78.846	ENSPNYG00000016530	eif3c	82	96.341	Pundamilia_nyererei
ENSSDUG00000023117	eif3c	100	88.197	ENSPNAG00000024040	eif3c	100	88.305	Pygocentrus_nattereri
ENSSDUG00000023117	eif3c	98	75.245	ENSRNOG00000018761	Eif3c	99	76.009	Rattus_norvegicus
ENSSDUG00000023117	eif3c	97	75.332	ENSRBIG00000044009	-	98	74.559	Rhinopithecus_bieti
ENSSDUG00000023117	eif3c	98	76.528	ENSRROG00000043626	-	97	79.502	Rhinopithecus_roxellana
ENSSDUG00000023117	eif3c	75	31.004	YMR309C	-	81	31.004	Saccharomyces_cerevisiae
ENSSDUG00000023117	eif3c	98	76.362	ENSSBOG00000032155	-	99	75.922	Saimiri_boliviensis_boliviensis
ENSSDUG00000023117	eif3c	97	75.277	ENSSHAG00000011808	-	99	75.942	Sarcophilus_harrisii
ENSSDUG00000023117	eif3c	100	87.648	ENSSFOG00015021823	eif3c	100	87.111	Scleropages_formosus
ENSSDUG00000023117	eif3c	95	95.420	ENSSMAG00000016638	eif3c	97	94.707	Scophthalmus_maximus
ENSSDUG00000023117	eif3c	100	99.677	ENSSLDG00000009706	eif3c	100	99.677	Seriola_lalandi_dorsalis
ENSSDUG00000023117	eif3c	100	77.361	ENSSPUG00000016470	-	97	80.702	Sphenodon_punctatus
ENSSDUG00000023117	eif3c	100	96.340	ENSSPAG00000000426	eif3c	100	96.340	Stegastes_partitus
ENSSDUG00000023117	eif3c	98	76.035	ENSSSCG00000034927	-	97	79.356	Sus_scrofa
ENSSDUG00000023117	eif3c	99	92.757	ENSTRUG00000008951	eif3c	99	91.135	Takifugu_rubripes
ENSSDUG00000023117	eif3c	100	89.462	ENSTNIG00000015210	eif3c	100	89.440	Tetraodon_nigroviridis
ENSSDUG00000023117	eif3c	98	76.580	ENSTTRG00000005880	-	97	79.649	Tursiops_truncatus
ENSSDUG00000023117	eif3c	70	84.150	ENSUAMG00000001127	-	91	92.357	Ursus_americanus
ENSSDUG00000023117	eif3c	98	76.580	ENSUMAG00000010927	-	97	79.649	Ursus_maritimus
ENSSDUG00000023117	eif3c	98	75.272	ENSVVUG00000025970	-	97	77.892	Vulpes_vulpes
ENSSDUG00000023117	eif3c	98	83.520	ENSXETG00000002941	eif3c	100	77.447	Xenopus_tropicalis
ENSSDUG00000023117	eif3c	100	91.658	ENSXMAG00000013796	eif3c	100	91.640	Xiphophorus_maculatus