EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000023183 (Gene tree)
Gene ID
-
Gene Symbol
rbfox3b
Alias
rbfox3l|si:ch73-322f21.1
Full Name
RNA binding protein fox-1 homolog 3-like
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Plus strand
Length
93112 bases
Position
chrBDQW01000044.1:6770757-6863868
Accession
111217493
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000032263Fox-1_CPF12414.85e-4311
ENSSDUP00000032270Fox-1_CPF12414.85e-4311
ENSSDUP00000032263RRM_1PF00076.220.0001111
ENSSDUP00000032270RRM_1PF00076.220.0001111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000032825-2952-ENSSDUP00000032270281 (aa)--
ENSSDUT00000032818-2484XM_022739388ENSSDUP00000032263281 (aa)XP_022595109-
Gene Model
Click here to download ENSSDUG00000023183's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000023183's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000023183rbfox3b9570.805ENSSDUG00000015801-8671.246
ENSSDUG00000023183rbfox3b9447.923ENSSDUG00000008705rbfox1l8547.561
ENSSDUG00000023183rbfox3b10060.000ENSSDUG00000016413rbfox18459.365
ENSSDUG00000023183rbfox3b6855.159ENSSDUG00000009511-7249.854
ENSSDUG00000023183rbfox3b6657.377ENSSDUG00000004292rbfox27048.378
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000023183rbfox3b9570.000ENSG00000167281RBFOX38988.793Homo_sapiens
ENSSDUG00000023183rbfox3b8964.789ENSAPOG00000015658-7867.399Acanthochromis_polyacanthus
ENSSDUG00000023183rbfox3b10089.744ENSAPOG00000021630rbfox3b8589.744Acanthochromis_polyacanthus
ENSSDUG00000023183rbfox3b9566.038ENSAMEG00000014170RBFOX38469.277Ailuropoda_melanoleuca
ENSSDUG00000023183rbfox3b9561.270ENSACIG00000003768-8761.587Amphilophus_citrinellus
ENSSDUG00000023183rbfox3b10085.577ENSACIG00000010817rbfox3b9985.577Amphilophus_citrinellus
ENSSDUG00000023183rbfox3b10089.744ENSAOCG00000012358rbfox3b8589.744Amphiprion_ocellaris
ENSSDUG00000023183rbfox3b9670.333ENSAOCG00000010786-8371.338Amphiprion_ocellaris
ENSSDUG00000023183rbfox3b9565.109ENSAPEG00000015891-8366.964Amphiprion_percula
ENSSDUG00000023183rbfox3b10079.487ENSAPEG00000019081rbfox3b8478.846Amphiprion_percula
ENSSDUG00000023183rbfox3b10080.702ENSATEG00000019945rbfox3b9980.702Anabas_testudineus
ENSSDUG00000023183rbfox3b9669.967ENSATEG00000023101-9669.206Anabas_testudineus
ENSSDUG00000023183rbfox3b10072.063ENSACAG00000016093RBFOX38773.248Anolis_carolinensis
ENSSDUG00000023183rbfox3b9569.667ENSANAG00000023457RBFOX310072.930Aotus_nancymaae
ENSSDUG00000023183rbfox3b10081.272ENSACLG00000025552-9375.972Astatotilapia_calliptera
ENSSDUG00000023183rbfox3b10088.818ENSACLG00000020011rbfox3b10088.818Astatotilapia_calliptera
ENSSDUG00000023183rbfox3b10077.955ENSAMXG00000042841rbfox3b8977.316Astyanax_mexicanus
ENSSDUG00000023183rbfox3b9582.657ENSAMXG00000037246rbfox3a9576.730Astyanax_mexicanus
ENSSDUG00000023183rbfox3b9565.506ENSBTAG00000006280RBFOX310069.697Bos_taurus
ENSSDUG00000023183rbfox3b9565.190ENSCJAG00000009563RBFOX310069.394Callithrix_jacchus
ENSSDUG00000023183rbfox3b7472.083ENSCAFG00000005547RBFOX38574.895Canis_familiaris
ENSSDUG00000023183rbfox3b9565.190ENSCAFG00020008126RBFOX39663.435Canis_lupus_dingo
ENSSDUG00000023183rbfox3b9565.190ENSCHIG00000009124RBFOX39669.394Capra_hircus
ENSSDUG00000023183rbfox3b9565.615ENSTSYG00000029617RBFOX310069.789Carlito_syrichta
ENSSDUG00000023183rbfox3b9566.771ENSCPOG00000021703RBFOX310068.769Cavia_porcellus
ENSSDUG00000023183rbfox3b9569.667ENSCCAG00000028450RBFOX310072.930Cebus_capucinus
ENSSDUG00000023183rbfox3b9570.000ENSCATG00000018349RBFOX310073.248Cercocebus_atys
ENSSDUG00000023183rbfox3b9567.192ENSCLAG00000006449RBFOX310069.184Chinchilla_lanigera
ENSSDUG00000023183rbfox3b9570.000ENSCSAG00000002355RBFOX310073.248Chlorocebus_sabaeus
ENSSDUG00000023183rbfox3b9673.422ENSCPBG00000010904RBFOX310073.802Chrysemys_picta_bellii
ENSSDUG00000023183rbfox3b9570.000ENSCANG00000043120RBFOX310073.248Colobus_angolensis_palliatus
ENSSDUG00000023183rbfox3b9565.300ENSCGRG00001019476Rbfox310069.277Cricetulus_griseus_chok1gshd
ENSSDUG00000023183rbfox3b9565.300ENSCGRG00000003268Rbfox310069.277Cricetulus_griseus_crigri
ENSSDUG00000023183rbfox3b10067.937ENSCSEG00000020606RBFOX38767.450Cynoglossus_semilaevis
ENSSDUG00000023183rbfox3b10071.338ENSCSEG00000015567RBFOX38472.293Cynoglossus_semilaevis
ENSSDUG00000023183rbfox3b10089.744ENSCVAG00000006882rbfox3b8589.744Cyprinodon_variegatus
ENSSDUG00000023183rbfox3b9574.503ENSDARG00000010083rbfox3a9676.415Danio_rerio
ENSSDUG00000023183rbfox3b10081.915ENSDARG00000074310rbfox3b9692.670Danio_rerio
ENSSDUG00000023183rbfox3b8156.026ENSDNOG00000039391RBFOX39652.162Dasypus_novemcinctus
ENSSDUG00000023183rbfox3b9558.147ENSDORG00000005352Rbfox310060.061Dipodomys_ordii
ENSSDUG00000023183rbfox3b8454.475ENSEBUG00000013559RBFOX37754.023Eptatretus_burgeri
ENSSDUG00000023183rbfox3b10060.671ENSEBUG00000002129RBFOX39261.585Eptatretus_burgeri
ENSSDUG00000023183rbfox3b9570.199ENSEASG00005005059RBFOX310072.785Equus_asinus_asinus
ENSSDUG00000023183rbfox3b9569.868ENSECAG00000023811RBFOX310072.468Equus_caballus
ENSSDUG00000023183rbfox3b8276.056ENSEEUG00000013974RBFOX37286.885Erinaceus_europaeus
ENSSDUG00000023183rbfox3b5748.980ENSELUG00000009807-5445.192Esox_lucius
ENSSDUG00000023183rbfox3b10094.662ENSELUG00000017963rbfox3b10094.662Esox_lucius
ENSSDUG00000023183rbfox3b9569.000ENSFCAG00000002555RBFOX310072.293Felis_catus
ENSSDUG00000023183rbfox3b9556.495ENSFALG00000012288RBFOX38559.710Ficedula_albicollis
ENSSDUG00000023183rbfox3b9560.815ENSFDAG00000007489RBFOX310063.063Fukomys_damarensis
ENSSDUG00000023183rbfox3b100100.000ENSFHEG00000008550rbfox3b100100.000Fundulus_heteroclitus
ENSSDUG00000023183rbfox3b10059.722ENSGMOG00000019304-9660.556Gadus_morhua
ENSSDUG00000023183rbfox3b9580.224ENSGALG00000032889RBFOX38775.080Gallus_gallus
ENSSDUG00000023183rbfox3b9787.829ENSGAFG00000005025rbfox3b8887.829Gambusia_affinis
ENSSDUG00000023183rbfox3b9562.178ENSGACG00000002138-9663.462Gasterosteus_aculeatus
ENSSDUG00000023183rbfox3b9581.648ENSGAGG00000020025RBFOX310073.802Gopherus_agassizii
ENSSDUG00000023183rbfox3b9570.000ENSGGOG00000012546RBFOX310073.248Gorilla_gorilla
ENSSDUG00000023183rbfox3b10089.103ENSHBUG00000018099rbfox3b8589.103Haplochromis_burtoni
ENSSDUG00000023183rbfox3b10072.930ENSHBUG00000023098-9073.885Haplochromis_burtoni
ENSSDUG00000023183rbfox3b9566.044ENSHGLG00000008679RBFOX310067.761Heterocephalus_glaber_female
ENSSDUG00000023183rbfox3b9562.617ENSHGLG00100014739RBFOX39659.016Heterocephalus_glaber_male
ENSSDUG00000023183rbfox3b9574.333ENSHCOG00000007444RBFOX38173.502Hippocampus_comes
ENSSDUG00000023183rbfox3b10065.064ENSHCOG00000001863RBFOX39265.924Hippocampus_comes
ENSSDUG00000023183rbfox3b10064.535ENSIPUG00000021966rbfox3b9473.123Ictalurus_punctatus
ENSSDUG00000023183rbfox3b9581.181ENSIPUG00000012010rbfox3a9575.472Ictalurus_punctatus
ENSSDUG00000023183rbfox3b9560.073ENSSTOG00000026817RBFOX310062.630Ictidomys_tridecemlineatus
ENSSDUG00000023183rbfox3b9564.241ENSJJAG00000014167Rbfox310069.394Jaculus_jaculus
ENSSDUG00000023183rbfox3b10089.744ENSKMAG00000006726rbfox3b8589.744Kryptolebias_marmoratus
ENSSDUG00000023183rbfox3b9585.821ENSLBEG00000022508-8677.389Labrus_bergylta
ENSSDUG00000023183rbfox3b10089.744ENSLBEG00000004030rbfox3b9985.256Labrus_bergylta
ENSSDUG00000023183rbfox3b9661.329ENSLACG00000018409-8763.848Latimeria_chalumnae
ENSSDUG00000023183rbfox3b9678.548ENSLOCG00000012267rbfox3a9580.000Lepisosteus_oculatus
ENSSDUG00000023183rbfox3b9564.134ENSLAFG00000016623RBFOX39662.881Loxodonta_africana
ENSSDUG00000023183rbfox3b9563.492ENSMFAG00000002247RBFOX310063.989Macaca_fascicularis
ENSSDUG00000023183rbfox3b9570.000ENSMMUG00000023028RBFOX310073.248Macaca_mulatta
ENSSDUG00000023183rbfox3b9569.667ENSMNEG00000041147RBFOX310072.930Macaca_nemestrina
ENSSDUG00000023183rbfox3b9570.000ENSMLEG00000025686RBFOX310073.248Mandrillus_leucophaeus
ENSSDUG00000023183rbfox3b9569.900ENSMAMG00000020600-9070.382Mastacembelus_armatus
ENSSDUG00000023183rbfox3b10078.846ENSMAMG00000019810rbfox3b9977.885Mastacembelus_armatus
ENSSDUG00000023183rbfox3b10089.103ENSMZEG00005000781rbfox3b8589.103Maylandia_zebra
ENSSDUG00000023183rbfox3b9551.829ENSMZEG00005003055-7653.774Maylandia_zebra
ENSSDUG00000023183rbfox3b5865.979ENSMGAG00000005600RBFOX37866.827Meleagris_gallopavo
ENSSDUG00000023183rbfox3b9566.772ENSMAUG00000013543Rbfox310067.771Mesocricetus_auratus
ENSSDUG00000023183rbfox3b10072.293ENSMICG00000014898RBFOX310072.204Microcebus_murinus
ENSSDUG00000023183rbfox3b9564.241ENSMOCG00000015373Rbfox310068.278Microtus_ochrogaster
ENSSDUG00000023183rbfox3b10087.580ENSMMOG00000020193rbfox3b8587.580Mola_mola
ENSSDUG00000023183rbfox3b9570.333ENSMODG00000002089RBFOX38773.163Monodelphis_domestica
ENSSDUG00000023183rbfox3b10091.946ENSMALG00000020407rbfox3b8291.946Monopterus_albus
ENSSDUG00000023183rbfox3b10074.841ENSMALG00000018270-9670.476Monopterus_albus
ENSSDUG00000023183rbfox3b9568.667MGP_CAROLIEiJ_G0017487Rbfox310072.063Mus_caroli
ENSSDUG00000023183rbfox3b9570.432ENSMUSG00000025576Rbfox310071.835Mus_musculus
ENSSDUG00000023183rbfox3b9569.435MGP_PahariEiJ_G0018614Rbfox310072.468Mus_pahari
ENSSDUG00000023183rbfox3b9569.000MGP_SPRETEiJ_G0018331Rbfox310072.381Mus_spretus
ENSSDUG00000023183rbfox3b9562.018ENSMPUG00000012319RBFOX39165.242Mustela_putorius_furo
ENSSDUG00000023183rbfox3b9565.300ENSNGAG00000018006Rbfox310069.486Nannospalax_galili
ENSSDUG00000023183rbfox3b10087.821ENSNBRG00000010102rbfox3b8587.821Neolamprologus_brichardi
ENSSDUG00000023183rbfox3b10066.987ENSNBRG00000022885-8666.879Neolamprologus_brichardi
ENSSDUG00000023183rbfox3b10046.815ENSNLEG00000000153-9546.645Nomascus_leucogenys
ENSSDUG00000023183rbfox3b9546.667ENSMEUG00000004218-10049.167Notamacropus_eugenii
ENSSDUG00000023183rbfox3b6873.333ENSOPRG00000016279-6881.667Ochotona_princeps
ENSSDUG00000023183rbfox3b9571.761ENSODEG00000009433RBFOX310072.698Octodon_degus
ENSSDUG00000023183rbfox3b10090.064ENSONIG00000009549rbfox3b9679.830Oreochromis_niloticus
ENSSDUG00000023183rbfox3b10073.248ENSONIG00000007282-9274.204Oreochromis_niloticus
ENSSDUG00000023183rbfox3b6854.340ENSOCUG00000014217RBFOX37454.340Oryctolagus_cuniculus
ENSSDUG00000023183rbfox3b10088.782ENSORLG00000000905rbfox3b6888.782Oryzias_latipes
ENSSDUG00000023183rbfox3b10098.577ENSORLG00020018030rbfox3b9498.577Oryzias_latipes_hni
ENSSDUG00000023183rbfox3b10098.932ENSORLG00015009200rbfox3b9998.932Oryzias_latipes_hsok
ENSSDUG00000023183rbfox3b8097.345ENSOMEG00000014677rbfox3b8197.345Oryzias_melastigma
ENSSDUG00000023183rbfox3b9569.900ENSOGAG00000029595RBFOX38472.930Otolemur_garnettii
ENSSDUG00000023183rbfox3b7355.769ENSOARG00000002908RBFOX38650.294Ovis_aries
ENSSDUG00000023183rbfox3b7970.196ENSPPAG00000025383RBFOX39971.429Pan_paniscus
ENSSDUG00000023183rbfox3b9564.516ENSPPRG00000007819RBFOX310069.753Panthera_pardus
ENSSDUG00000023183rbfox3b9570.000ENSPTRG00000009727RBFOX310073.248Pan_troglodytes
ENSSDUG00000023183rbfox3b9570.000ENSPANG00000019837RBFOX310073.248Papio_anubis
ENSSDUG00000023183rbfox3b9589.219ENSPKIG00000010299rbfox3a8189.437Paramormyrops_kingsleyae
ENSSDUG00000023183rbfox3b10068.662ENSPKIG00000022633-8366.783Paramormyrops_kingsleyae
ENSSDUG00000023183rbfox3b8481.273ENSPMGG00000008000rbfox3b8281.579Periophthalmus_magnuspinnatus
ENSSDUG00000023183rbfox3b9564.873ENSPEMG00000010500Rbfox310068.882Peromyscus_maniculatus_bairdii
ENSSDUG00000023183rbfox3b5271.605ENSPMAG00000008689rbfox3b7974.074Petromyzon_marinus
ENSSDUG00000023183rbfox3b9580.224ENSPCIG00000005766RBFOX310081.560Phascolarctos_cinereus
ENSSDUG00000023183rbfox3b10089.744ENSPFOG00000018294rbfox3b9684.337Poecilia_formosa
ENSSDUG00000023183rbfox3b7481.172ENSPLAG00000000481rbfox3b9367.774Poecilia_latipinna
ENSSDUG00000023183rbfox3b10099.644ENSPMEG00000022997rbfox3b10099.644Poecilia_mexicana
ENSSDUG00000023183rbfox3b10089.776ENSPREG00000012886rbfox3b9089.776Poecilia_reticulata
ENSSDUG00000023183rbfox3b7963.529ENSPPYG00000008704RBFOX38465.505Pongo_abelii
ENSSDUG00000023183rbfox3b9556.647ENSPCAG00000001401RBFOX310056.787Procavia_capensis
ENSSDUG00000023183rbfox3b10065.861ENSPCOG00000012689RBFOX310063.158Propithecus_coquereli
ENSSDUG00000023183rbfox3b9550.720ENSPVAG00000015243RBFOX310054.972Pteropus_vampyrus
ENSSDUG00000023183rbfox3b10074.841ENSPNYG00000010414rbfox3b8373.397Pundamilia_nyererei
ENSSDUG00000023183rbfox3b10067.949ENSPNYG00000009079-8167.834Pundamilia_nyererei
ENSSDUG00000023183rbfox3b10078.648ENSPNAG00000018173rbfox3b9078.648Pygocentrus_nattereri
ENSSDUG00000023183rbfox3b9583.026ENSPNAG00000002889rbfox3a8485.017Pygocentrus_nattereri
ENSSDUG00000023183rbfox3b9569.435ENSRNOG00000003386Rbfox310072.468Rattus_norvegicus
ENSSDUG00000023183rbfox3b9570.000ENSRBIG00000040449RBFOX38773.248Rhinopithecus_bieti
ENSSDUG00000023183rbfox3b9570.000ENSRROG00000000766RBFOX310073.248Rhinopithecus_roxellana
ENSSDUG00000023183rbfox3b9569.667ENSSBOG00000031591RBFOX310072.930Saimiri_boliviensis_boliviensis
ENSSDUG00000023183rbfox3b9580.224ENSSHAG00000016076RBFOX310081.560Sarcophilus_harrisii
ENSSDUG00000023183rbfox3b9572.862ENSSFOG00015004716RBFOX39572.474Scleropages_formosus
ENSSDUG00000023183rbfox3b9587.732ENSSFOG00015023260rbfox3a9489.789Scleropages_formosus
ENSSDUG00000023183rbfox3b10093.960ENSSMAG00000012618rbfox3b7093.960Scophthalmus_maximus
ENSSDUG00000023183rbfox3b10081.625ENSSMAG00000019052-9480.919Scophthalmus_maximus
ENSSDUG00000023183rbfox3b9670.530ENSSLDG00000016098-8771.019Seriola_lalandi_dorsalis
ENSSDUG00000023183rbfox3b10091.156ENSSLDG00000000149rbfox3b8491.156Seriola_lalandi_dorsalis
ENSSDUG00000023183rbfox3b9582.156ENSSPUG00000011733RBFOX39974.121Sphenodon_punctatus
ENSSDUG00000023183rbfox3b10079.808ENSSPAG00000017571rbfox3b8379.808Stegastes_partitus
ENSSDUG00000023183rbfox3b8570.428ENSSPAG00000004898-8571.324Stegastes_partitus
ENSSDUG00000023183rbfox3b8569.853ENSSSCG00000039498RBFOX39661.321Sus_scrofa
ENSSDUG00000023183rbfox3b10079.814ENSTRUG00000004894rbfox3b9078.882Takifugu_rubripes
ENSSDUG00000023183rbfox3b10079.651ENSTNIG00000011278rbfox3b8679.651Tetraodon_nigroviridis
ENSSDUG00000023183rbfox3b5658.974ENSTBEG00000004296-8951.360Tupaia_belangeri
ENSSDUG00000023183rbfox3b9655.874ENSTTRG00000003676RBFOX310059.834Tursiops_truncatus
ENSSDUG00000023183rbfox3b9570.000ENSUAMG00000004668RBFOX310073.248Ursus_americanus
ENSSDUG00000023183rbfox3b9569.667ENSVVUG00000017864RBFOX310072.930Vulpes_vulpes
ENSSDUG00000023183rbfox3b10058.333ENSXETG00000020236rbfox38558.333Xenopus_tropicalis
ENSSDUG00000023183rbfox3b10088.179ENSXCOG00000018262rbfox3b10084.244Xiphophorus_couchianus
ENSSDUG00000023183rbfox3b10094.295ENSXMAG00000012939rbfox3b9694.295Xiphophorus_maculatus

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