EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000023355 (Gene tree)
Gene ID: 111239492
Gene Symbol: nhp2
Alias: nola2|wu:fb36b10|wu:fd61a03|zgc:73227
Full Name: NHP2 ribonucleoprotein
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 2698 bases
Position: chrBDQW01002927.1:357516-360213
Accession: 111239492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000032507	Ribosomal_L7Ae	PF01248.26	6.6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000033065	-	1655	XM_022769380	ENSSDUP00000032507	153 (aa)	XP_022625101	UPI000BBE2945

Gene Model

Click here to download ENSSDUG00000023355's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000023355's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000023355	nhp2	71	37.963	ENSSDUG00000004460	snu13a	84	37.963

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000023355	nhp2	100	71.895	ENSG00000145912	NHP2	100	71.895	Homo_sapiens
ENSSDUG00000023355	nhp2	100	91.503	ENSAPOG00000004742	nhp2	100	91.503	Acanthochromis_polyacanthus
ENSSDUG00000023355	nhp2	100	71.242	ENSAMEG00000006471	NHP2	100	71.242	Ailuropoda_melanoleuca
ENSSDUG00000023355	nhp2	100	83.544	ENSACIG00000007968	nhp2	100	86.076	Amphilophus_citrinellus
ENSSDUG00000023355	nhp2	100	91.503	ENSAOCG00000016311	nhp2	100	91.503	Amphiprion_ocellaris
ENSSDUG00000023355	nhp2	100	91.503	ENSAPEG00000008765	nhp2	100	91.503	Amphiprion_percula
ENSSDUG00000023355	nhp2	100	91.613	ENSATEG00000009651	nhp2	100	91.613	Anabas_testudineus
ENSSDUG00000023355	nhp2	86	80.303	ENSACAG00000006692	NHP2	87	80.451	Anolis_carolinensis
ENSSDUG00000023355	nhp2	100	71.242	ENSANAG00000023290	NHP2	100	71.242	Aotus_nancymaae
ENSSDUG00000023355	nhp2	84	67.442	ENSANAG00000031552	-	99	67.442	Aotus_nancymaae
ENSSDUG00000023355	nhp2	100	86.364	ENSACLG00000001082	nhp2	100	87.013	Astatotilapia_calliptera
ENSSDUG00000023355	nhp2	100	84.314	ENSAMXG00000005845	nhp2	100	84.314	Astyanax_mexicanus
ENSSDUG00000023355	nhp2	100	71.242	ENSBTAG00000006374	NHP2	100	71.242	Bos_taurus
ENSSDUG00000023355	nhp2	91	50.355	WBGene00012964	Y48A6B.3	87	49.645	Caenorhabditis_elegans
ENSSDUG00000023355	nhp2	98	71.333	ENSCJAG00000023093	-	98	71.333	Callithrix_jacchus
ENSSDUG00000023355	nhp2	100	71.895	ENSCJAG00000038564	-	100	71.895	Callithrix_jacchus
ENSSDUG00000023355	nhp2	100	71.242	ENSCAFG00000000240	NHP2	100	71.242	Canis_familiaris
ENSSDUG00000023355	nhp2	100	71.242	ENSCHIG00000015159	NHP2	100	71.242	Capra_hircus
ENSSDUG00000023355	nhp2	100	53.595	ENSTSYG00000008150	NHP2	100	53.595	Carlito_syrichta
ENSSDUG00000023355	nhp2	100	70.588	ENSCPOG00000033753	NHP2	100	71.795	Cavia_porcellus
ENSSDUG00000023355	nhp2	88	68.889	ENSCCAG00000027964	-	92	68.889	Cebus_capucinus
ENSSDUG00000023355	nhp2	100	71.242	ENSCCAG00000034815	NHP2	100	71.242	Cebus_capucinus
ENSSDUG00000023355	nhp2	100	58.824	ENSCCAG00000034664	-	100	58.824	Cebus_capucinus
ENSSDUG00000023355	nhp2	100	71.895	ENSCATG00000043608	NHP2	100	71.895	Cercocebus_atys
ENSSDUG00000023355	nhp2	100	70.588	ENSCLAG00000016005	NHP2	100	71.795	Chinchilla_lanigera
ENSSDUG00000023355	nhp2	100	71.895	ENSCSAG00000008690	NHP2	100	71.895	Chlorocebus_sabaeus
ENSSDUG00000023355	nhp2	100	70.588	ENSCHOG00000013038	NHP2	100	70.588	Choloepus_hoffmanni
ENSSDUG00000023355	nhp2	86	80.303	ENSCPBG00000022106	NHP2	99	74.324	Chrysemys_picta_bellii
ENSSDUG00000023355	nhp2	98	56.000	ENSCSAVG00000008036	-	98	56.000	Ciona_savignyi
ENSSDUG00000023355	nhp2	95	68.276	ENSCANG00000038441	-	92	72.308	Colobus_angolensis_palliatus
ENSSDUG00000023355	nhp2	100	71.895	ENSCANG00000031562	NHP2	100	71.895	Colobus_angolensis_palliatus
ENSSDUG00000023355	nhp2	100	67.974	ENSCGRG00001005326	Nhp2	100	67.974	Cricetulus_griseus_chok1gshd
ENSSDUG00000023355	nhp2	100	67.974	ENSCGRG00000013680	Nhp2	100	67.974	Cricetulus_griseus_crigri
ENSSDUG00000023355	nhp2	100	85.897	ENSCSEG00000006761	nhp2	100	85.897	Cynoglossus_semilaevis
ENSSDUG00000023355	nhp2	100	83.660	ENSDARG00000069422	nhp2	100	83.660	Danio_rerio
ENSSDUG00000023355	nhp2	100	71.895	ENSDNOG00000017150	NHP2	94	71.895	Dasypus_novemcinctus
ENSSDUG00000023355	nhp2	100	72.549	ENSDORG00000003312	Nhp2	100	72.549	Dipodomys_ordii
ENSSDUG00000023355	nhp2	100	46.250	FBgn0029148	NHP2	100	46.250	Drosophila_melanogaster
ENSSDUG00000023355	nhp2	100	71.975	ENSETEG00000006774	NHP2	100	72.078	Echinops_telfairi
ENSSDUG00000023355	nhp2	100	71.242	ENSEASG00005012569	NHP2	100	71.242	Equus_asinus_asinus
ENSSDUG00000023355	nhp2	96	71.429	ENSECAG00000022963	NHP2	84	71.429	Equus_caballus
ENSSDUG00000023355	nhp2	65	86.000	ENSELUG00000021981	nhp2	81	87.368	Esox_lucius
ENSSDUG00000023355	nhp2	100	71.242	ENSFCAG00000015541	NHP2	100	71.242	Felis_catus
ENSSDUG00000023355	nhp2	86	77.863	ENSFALG00000008774	NHP2	87	74.820	Ficedula_albicollis
ENSSDUG00000023355	nhp2	100	68.590	ENSFDAG00000008131	NHP2	100	68.590	Fukomys_damarensis
ENSSDUG00000023355	nhp2	100	87.821	ENSFHEG00000000431	nhp2	100	87.821	Fundulus_heteroclitus
ENSSDUG00000023355	nhp2	88	89.630	ENSGMOG00000000278	nhp2	100	85.430	Gadus_morhua
ENSSDUG00000023355	nhp2	78	80.833	ENSGALG00000033666	NHP2	82	74.101	Gallus_gallus
ENSSDUG00000023355	nhp2	100	84.615	ENSGAFG00000009838	nhp2	100	87.261	Gambusia_affinis
ENSSDUG00000023355	nhp2	100	84.967	ENSGACG00000020889	nhp2	100	84.967	Gasterosteus_aculeatus
ENSSDUG00000023355	nhp2	65	79.000	ENSGAGG00000006901	NHP2	80	79.000	Gopherus_agassizii
ENSSDUG00000023355	nhp2	100	63.399	ENSGGOG00000027198	-	100	63.399	Gorilla_gorilla
ENSSDUG00000023355	nhp2	100	63.399	ENSGGOG00000040409	-	100	63.399	Gorilla_gorilla
ENSSDUG00000023355	nhp2	100	86.364	ENSHBUG00000010207	nhp2	100	87.662	Haplochromis_burtoni
ENSSDUG00000023355	nhp2	100	64.706	ENSHGLG00000014450	-	100	64.706	Heterocephalus_glaber_female
ENSSDUG00000023355	nhp2	100	71.242	ENSHGLG00000013630	NHP2	100	71.242	Heterocephalus_glaber_female
ENSSDUG00000023355	nhp2	100	71.242	ENSHGLG00100007298	NHP2	100	71.242	Heterocephalus_glaber_male
ENSSDUG00000023355	nhp2	100	64.706	ENSHGLG00100005282	-	100	64.706	Heterocephalus_glaber_male
ENSSDUG00000023355	nhp2	100	64.706	ENSHGLG00100003440	-	100	64.706	Heterocephalus_glaber_male
ENSSDUG00000023355	nhp2	100	80.380	ENSHCOG00000019552	nhp2	100	80.380	Hippocampus_comes
ENSSDUG00000023355	nhp2	100	84.314	ENSIPUG00000024197	NHP2	100	84.314	Ictalurus_punctatus
ENSSDUG00000023355	nhp2	100	71.242	ENSSTOG00000003235	NHP2	100	71.242	Ictidomys_tridecemlineatus
ENSSDUG00000023355	nhp2	86	78.788	ENSJJAG00000016469	Nhp2	100	74.839	Jaculus_jaculus
ENSSDUG00000023355	nhp2	100	87.742	ENSLBEG00000002128	nhp2	100	87.742	Labrus_bergylta
ENSSDUG00000023355	nhp2	100	79.221	ENSLACG00000017167	NHP2	99	79.221	Latimeria_chalumnae
ENSSDUG00000023355	nhp2	90	83.212	ENSLOCG00000009630	nhp2	100	81.046	Lepisosteus_oculatus
ENSSDUG00000023355	nhp2	100	71.242	ENSLAFG00000012828	NHP2	100	71.242	Loxodonta_africana
ENSSDUG00000023355	nhp2	100	71.895	ENSMFAG00000032376	NHP2	100	71.895	Macaca_fascicularis
ENSSDUG00000023355	nhp2	100	55.556	ENSMMUG00000046673	-	100	55.556	Macaca_mulatta
ENSSDUG00000023355	nhp2	100	71.895	ENSMNEG00000038787	NHP2	100	71.895	Macaca_nemestrina
ENSSDUG00000023355	nhp2	100	71.895	ENSMLEG00000028639	NHP2	100	71.895	Mandrillus_leucophaeus
ENSSDUG00000023355	nhp2	100	90.323	ENSMAMG00000022425	nhp2	100	90.323	Mastacembelus_armatus
ENSSDUG00000023355	nhp2	100	86.364	ENSMZEG00005027834	nhp2	100	87.013	Maylandia_zebra
ENSSDUG00000023355	nhp2	65	82.000	ENSMGAG00000003917	NHP2	95	82.105	Meleagris_gallopavo
ENSSDUG00000023355	nhp2	100	71.242	ENSMICG00000005379	NHP2	100	71.242	Microcebus_murinus
ENSSDUG00000023355	nhp2	100	69.281	ENSMOCG00000022171	Nhp2	100	69.281	Microtus_ochrogaster
ENSSDUG00000023355	nhp2	88	88.889	ENSMMOG00000016811	nhp2	100	85.161	Mola_mola
ENSSDUG00000023355	nhp2	100	70.130	ENSMODG00000004231	NHP2	100	70.130	Monodelphis_domestica
ENSSDUG00000023355	nhp2	100	91.613	ENSMALG00000009613	nhp2	100	91.613	Monopterus_albus
ENSSDUG00000023355	nhp2	100	67.320	MGP_CAROLIEiJ_G0016312	Nhp2	100	67.320	Mus_caroli
ENSSDUG00000023355	nhp2	100	67.974	ENSMUSG00000001056	Nhp2	100	67.974	Mus_musculus
ENSSDUG00000023355	nhp2	100	67.974	MGP_PahariEiJ_G0017447	Nhp2	100	67.974	Mus_pahari
ENSSDUG00000023355	nhp2	100	67.974	MGP_SPRETEiJ_G0017156	Nhp2	100	67.974	Mus_spretus
ENSSDUG00000023355	nhp2	100	71.519	ENSMPUG00000000747	NHP2	100	71.519	Mustela_putorius_furo
ENSSDUG00000023355	nhp2	100	69.281	ENSMLUG00000003377	NHP2	100	69.281	Myotis_lucifugus
ENSSDUG00000023355	nhp2	100	75.163	ENSNGAG00000021818	Nhp2	100	75.163	Nannospalax_galili
ENSSDUG00000023355	nhp2	100	88.312	ENSNBRG00000018016	nhp2	100	89.610	Neolamprologus_brichardi
ENSSDUG00000023355	nhp2	100	65.409	ENSNLEG00000015765	NHP2	99	66.447	Nomascus_leucogenys
ENSSDUG00000023355	nhp2	100	69.481	ENSMEUG00000003839	NHP2	100	69.481	Notamacropus_eugenii
ENSSDUG00000023355	nhp2	100	57.051	ENSOPRG00000007907	NHP2	100	57.051	Ochotona_princeps
ENSSDUG00000023355	nhp2	100	71.895	ENSODEG00000006948	NHP2	100	71.895	Octodon_degus
ENSSDUG00000023355	nhp2	100	88.961	ENSONIG00000017865	nhp2	100	90.260	Oreochromis_niloticus
ENSSDUG00000023355	nhp2	99	72.903	ENSOCUG00000016057	-	99	72.903	Oryctolagus_cuniculus
ENSSDUG00000023355	nhp2	99	72.903	ENSOCUG00000016091	-	99	72.903	Oryctolagus_cuniculus
ENSSDUG00000023355	nhp2	100	86.928	ENSORLG00000029195	nhp2	100	86.928	Oryzias_latipes
ENSSDUG00000023355	nhp2	100	86.928	ENSORLG00020003277	nhp2	100	86.928	Oryzias_latipes_hni
ENSSDUG00000023355	nhp2	100	86.928	ENSORLG00015007851	nhp2	100	86.957	Oryzias_latipes_hsok
ENSSDUG00000023355	nhp2	98	86.000	ENSOMEG00000017381	nhp2	87	86.000	Oryzias_melastigma
ENSSDUG00000023355	nhp2	100	72.785	ENSOGAG00000016108	NHP2	100	70.886	Otolemur_garnettii
ENSSDUG00000023355	nhp2	100	65.359	ENSOARG00000006274	NHP2	100	65.359	Ovis_aries
ENSSDUG00000023355	nhp2	100	64.052	ENSPPAG00000038834	-	100	64.052	Pan_paniscus
ENSSDUG00000023355	nhp2	100	71.895	ENSPPAG00000028668	NHP2	100	71.895	Pan_paniscus
ENSSDUG00000023355	nhp2	100	71.242	ENSPPRG00000022505	NHP2	100	71.242	Panthera_pardus
ENSSDUG00000023355	nhp2	61	82.979	ENSPTIG00000021731	NHP2	75	82.105	Panthera_tigris_altaica
ENSSDUG00000023355	nhp2	100	71.895	ENSPTRG00000048185	NHP2	100	71.895	Pan_troglodytes
ENSSDUG00000023355	nhp2	93	64.085	ENSPTRG00000049011	-	99	64.085	Pan_troglodytes
ENSSDUG00000023355	nhp2	93	64.085	ENSPTRG00000050430	-	99	64.085	Pan_troglodytes
ENSSDUG00000023355	nhp2	100	71.895	ENSPANG00000019121	NHP2	100	71.895	Papio_anubis
ENSSDUG00000023355	nhp2	90	90.511	ENSPKIG00000006410	nhp2	100	86.928	Paramormyrops_kingsleyae
ENSSDUG00000023355	nhp2	100	79.394	ENSPMGG00000002916	nhp2	100	79.755	Periophthalmus_magnuspinnatus
ENSSDUG00000023355	nhp2	100	67.974	ENSPEMG00000023567	Nhp2	100	67.974	Peromyscus_maniculatus_bairdii
ENSSDUG00000023355	nhp2	100	65.161	ENSPMAG00000009888	nhp2	100	65.161	Petromyzon_marinus
ENSSDUG00000023355	nhp2	72	73.636	ENSPCIG00000019848	-	92	73.636	Phascolarctos_cinereus
ENSSDUG00000023355	nhp2	100	69.481	ENSPCIG00000002727	-	100	69.481	Phascolarctos_cinereus
ENSSDUG00000023355	nhp2	100	85.350	ENSPFOG00000002315	nhp2	100	85.350	Poecilia_formosa
ENSSDUG00000023355	nhp2	100	84.076	ENSPLAG00000019287	nhp2	100	84.076	Poecilia_latipinna
ENSSDUG00000023355	nhp2	100	85.350	ENSPMEG00000024346	nhp2	100	85.350	Poecilia_mexicana
ENSSDUG00000023355	nhp2	73	84.685	ENSPREG00000005005	nhp2	95	84.685	Poecilia_reticulata
ENSSDUG00000023355	nhp2	100	71.242	ENSPPYG00000016105	NHP2	100	71.242	Pongo_abelii
ENSSDUG00000023355	nhp2	100	71.242	ENSPCOG00000020708	NHP2	100	71.242	Propithecus_coquereli
ENSSDUG00000023355	nhp2	100	70.588	ENSPVAG00000001647	NHP2	100	70.588	Pteropus_vampyrus
ENSSDUG00000023355	nhp2	100	86.364	ENSPNYG00000022418	nhp2	100	87.662	Pundamilia_nyererei
ENSSDUG00000023355	nhp2	100	82.353	ENSPNAG00000013779	nhp2	100	82.353	Pygocentrus_nattereri
ENSSDUG00000023355	nhp2	71	78.704	ENSRNOG00000004247	Nhp2	89	78.704	Rattus_norvegicus
ENSSDUG00000023355	nhp2	100	69.281	ENSRNOG00000049622	LOC103690013	100	69.281	Rattus_norvegicus
ENSSDUG00000023355	nhp2	100	71.895	ENSRBIG00000018610	NHP2	100	71.895	Rhinopithecus_bieti
ENSSDUG00000023355	nhp2	100	71.895	ENSRROG00000043373	NHP2	100	71.895	Rhinopithecus_roxellana
ENSSDUG00000023355	nhp2	100	64.706	ENSRROG00000044295	-	99	65.753	Rhinopithecus_roxellana
ENSSDUG00000023355	nhp2	83	50.000	YDL208W	-	88	50.000	Saccharomyces_cerevisiae
ENSSDUG00000023355	nhp2	100	71.242	ENSSBOG00000027889	NHP2	100	71.242	Saimiri_boliviensis_boliviensis
ENSSDUG00000023355	nhp2	100	70.130	ENSSHAG00000015581	NHP2	100	70.130	Sarcophilus_harrisii
ENSSDUG00000023355	nhp2	100	86.928	ENSSFOG00015017061	nhp2	100	86.928	Scleropages_formosus
ENSSDUG00000023355	nhp2	100	89.744	ENSSMAG00000011251	nhp2	100	91.667	Scophthalmus_maximus
ENSSDUG00000023355	nhp2	87	80.451	ENSSPUG00000005173	NHP2	88	80.451	Sphenodon_punctatus
ENSSDUG00000023355	nhp2	100	90.196	ENSSPAG00000011696	nhp2	100	90.196	Stegastes_partitus
ENSSDUG00000023355	nhp2	100	71.242	ENSSSCG00000039635	-	86	71.242	Sus_scrofa
ENSSDUG00000023355	nhp2	100	58.824	ENSSSCG00000009710	-	100	58.824	Sus_scrofa
ENSSDUG00000023355	nhp2	65	71.717	ENSTGUG00000000368	NHP2	89	69.524	Taeniopygia_guttata
ENSSDUG00000023355	nhp2	100	88.050	ENSTRUG00000008183	nhp2	100	88.050	Takifugu_rubripes
ENSSDUG00000023355	nhp2	99	79.755	ENSTNIG00000004219	nhp2	99	77.301	Tetraodon_nigroviridis
ENSSDUG00000023355	nhp2	100	71.242	ENSUAMG00000025154	NHP2	100	71.242	Ursus_americanus
ENSSDUG00000023355	nhp2	99	71.523	ENSUMAG00000023916	NHP2	97	71.523	Ursus_maritimus
ENSSDUG00000023355	nhp2	73	71.930	ENSVPAG00000010059	NHP2	100	71.930	Vicugna_pacos
ENSSDUG00000023355	nhp2	100	60.556	ENSVVUG00000001030	NHP2	100	58.889	Vulpes_vulpes
ENSSDUG00000023355	nhp2	99	74.342	ENSXETG00000006731	nhp2	99	74.342	Xenopus_tropicalis
ENSSDUG00000023355	nhp2	100	85.256	ENSXMAG00000007031	nhp2	100	87.898	Xiphophorus_maculatus