EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000023402 (Gene tree)
Gene ID: 111239483
Gene Symbol: ncbp3
Alias: zgc:55870
Full Name: nuclear cap binding subunit 3
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 7675 bases
Position: chrBDQW01002927.1:577133-584807
Accession: 111239483
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000032570	NCBP3	PF10309.9	7.9e-22	1	1
ENSSDUP00000032568	NCBP3	PF10309.9	1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000033126	-	2657	XM_022769366	ENSSDUP00000032568	694 (aa)	XP_022625087	UPI000BBE9366
ENSSDUT00000033129	-	1785	-	ENSSDUP00000032570	594 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000023402's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000023402's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000023402	ncbp3	98	57.686	ENSG00000074356	NCBP3	99	56.744	Homo_sapiens
ENSSDUG00000023402	ncbp3	100	86.371	ENSAPOG00000020809	ncbp3	100	86.700	Acanthochromis_polyacanthus
ENSSDUG00000023402	ncbp3	98	55.781	ENSAMEG00000009372	NCBP3	96	57.003	Ailuropoda_melanoleuca
ENSSDUG00000023402	ncbp3	98	81.176	ENSACIG00000024257	ncbp3	100	81.260	Amphilophus_citrinellus
ENSSDUG00000023402	ncbp3	100	86.460	ENSAPEG00000020857	ncbp3	100	86.623	Amphiprion_percula
ENSSDUG00000023402	ncbp3	99	82.808	ENSATEG00000010801	ncbp3	100	82.178	Anabas_testudineus
ENSSDUG00000023402	ncbp3	89	56.729	ENSAPLG00000007373	NCBP3	99	57.778	Anas_platyrhynchos
ENSSDUG00000023402	ncbp3	90	57.487	ENSANAG00000024918	-	95	56.931	Aotus_nancymaae
ENSSDUG00000023402	ncbp3	100	49.620	ENSANAG00000020550	-	92	49.905	Aotus_nancymaae
ENSSDUG00000023402	ncbp3	100	81.006	ENSACLG00000000455	ncbp3	100	81.656	Astatotilapia_calliptera
ENSSDUG00000023402	ncbp3	99	63.727	ENSAMXG00000005968	ncbp3	99	63.690	Astyanax_mexicanus
ENSSDUG00000023402	ncbp3	98	57.556	ENSBTAG00000016621	NCBP3	95	66.667	Bos_taurus
ENSSDUG00000023402	ncbp3	97	56.290	ENSCAFG00000019371	NCBP3	95	55.859	Canis_familiaris
ENSSDUG00000023402	ncbp3	97	56.290	ENSCAFG00020008143	NCBP3	95	55.859	Canis_lupus_dingo
ENSSDUG00000023402	ncbp3	100	58.202	ENSCHIG00000009002	NCBP3	99	58.399	Capra_hircus
ENSSDUG00000023402	ncbp3	98	57.643	ENSTSYG00000008184	NCBP3	99	57.143	Carlito_syrichta
ENSSDUG00000023402	ncbp3	88	58.099	ENSCAPG00000016045	NCBP3	97	58.103	Cavia_aperea
ENSSDUG00000023402	ncbp3	98	57.711	ENSCPOG00000015529	NCBP3	99	56.786	Cavia_porcellus
ENSSDUG00000023402	ncbp3	98	57.460	ENSCCAG00000021154	NCBP3	99	57.054	Cebus_capucinus
ENSSDUG00000023402	ncbp3	97	57.188	ENSCATG00000013041	NCBP3	95	56.369	Cercocebus_atys
ENSSDUG00000023402	ncbp3	98	57.212	ENSCLAG00000012229	NCBP3	99	57.433	Chinchilla_lanigera
ENSSDUG00000023402	ncbp3	98	55.784	ENSCSAG00000013543	NCBP3	99	55.039	Chlorocebus_sabaeus
ENSSDUG00000023402	ncbp3	98	54.080	ENSCHOG00000012323	NCBP3	99	53.666	Choloepus_hoffmanni
ENSSDUG00000023402	ncbp3	100	56.646	ENSCPBG00000014824	NCBP3	99	59.051	Chrysemys_picta_bellii
ENSSDUG00000023402	ncbp3	98	55.429	ENSCANG00000033561	NCBP3	95	64.583	Colobus_angolensis_palliatus
ENSSDUG00000023402	ncbp3	98	57.528	ENSCGRG00001018538	Ncbp3	99	56.719	Cricetulus_griseus_chok1gshd
ENSSDUG00000023402	ncbp3	87	59.002	ENSCGRG00000015075	Ncbp3	99	58.014	Cricetulus_griseus_crigri
ENSSDUG00000023402	ncbp3	100	75.680	ENSCSEG00000006375	ncbp3	100	76.442	Cynoglossus_semilaevis
ENSSDUG00000023402	ncbp3	100	72.316	ENSCVAG00000020563	ncbp3	100	70.815	Cyprinodon_variegatus
ENSSDUG00000023402	ncbp3	99	63.916	ENSDARG00000044597	ncbp3	99	62.661	Danio_rerio
ENSSDUG00000023402	ncbp3	97	57.257	ENSDNOG00000006490	NCBP3	95	56.160	Dasypus_novemcinctus
ENSSDUG00000023402	ncbp3	100	57.031	ENSDORG00000010141	Ncbp3	95	64.583	Dipodomys_ordii
ENSSDUG00000023402	ncbp3	93	37.021	ENSEBUG00000004541	ncbp3	96	37.721	Eptatretus_burgeri
ENSSDUG00000023402	ncbp3	97	57.097	ENSEASG00005013399	NCBP3	95	57.051	Equus_asinus_asinus
ENSSDUG00000023402	ncbp3	97	57.097	ENSECAG00000008444	NCBP3	95	57.051	Equus_caballus
ENSSDUG00000023402	ncbp3	57	57.650	ENSEEUG00000008573	NCBP3	81	51.663	Erinaceus_europaeus
ENSSDUG00000023402	ncbp3	100	64.649	ENSELUG00000009182	ncbp3	99	62.178	Esox_lucius
ENSSDUG00000023402	ncbp3	98	57.853	ENSFCAG00000007929	NCBP3	99	57.969	Felis_catus
ENSSDUG00000023402	ncbp3	92	58.390	ENSFALG00000006704	NCBP3	99	59.022	Ficedula_albicollis
ENSSDUG00000023402	ncbp3	98	58.013	ENSFDAG00000013355	NCBP3	99	58.438	Fukomys_damarensis
ENSSDUG00000023402	ncbp3	98	66.208	ENSFHEG00000005607	ncbp3	100	66.114	Fundulus_heteroclitus
ENSSDUG00000023402	ncbp3	69	86.792	ENSGMOG00000001007	ncbp3	80	71.717	Gadus_morhua
ENSSDUG00000023402	ncbp3	100	56.182	ENSGALG00000002653	NCBP3	99	57.500	Gallus_gallus
ENSSDUG00000023402	ncbp3	82	78.286	ENSGAFG00000008912	ncbp3	80	78.532	Gambusia_affinis
ENSSDUG00000023402	ncbp3	100	72.441	ENSGACG00000020902	ncbp3	100	68.868	Gasterosteus_aculeatus
ENSSDUG00000023402	ncbp3	100	56.439	ENSGAGG00000014490	NCBP3	99	57.911	Gopherus_agassizii
ENSSDUG00000023402	ncbp3	98	57.619	ENSGGOG00000007496	NCBP3	99	56.677	Gorilla_gorilla
ENSSDUG00000023402	ncbp3	100	59.841	ENSHBUG00000019541	ncbp3	100	59.902	Haplochromis_burtoni
ENSSDUG00000023402	ncbp3	98	57.692	ENSHGLG00000015839	NCBP3	99	57.277	Heterocephalus_glaber_female
ENSSDUG00000023402	ncbp3	98	57.692	ENSHGLG00100007256	NCBP3	99	57.277	Heterocephalus_glaber_male
ENSSDUG00000023402	ncbp3	100	71.879	ENSHCOG00000004161	ncbp3	100	69.896	Hippocampus_comes
ENSSDUG00000023402	ncbp3	98	68.046	ENSIPUG00000024397	ncbp3	98	79.167	Ictalurus_punctatus
ENSSDUG00000023402	ncbp3	73	60.526	ENSSTOG00000002101	NCBP3	99	60.217	Ictidomys_tridecemlineatus
ENSSDUG00000023402	ncbp3	98	49.840	ENSJJAG00000000634	Ncbp3	99	50.235	Jaculus_jaculus
ENSSDUG00000023402	ncbp3	99	77.305	ENSKMAG00000001932	ncbp3	100	73.907	Kryptolebias_marmoratus
ENSSDUG00000023402	ncbp3	98	75.041	ENSLBEG00000006036	ncbp3	100	75.441	Labrus_bergylta
ENSSDUG00000023402	ncbp3	98	68.705	ENSLBEG00000001558	-	100	69.154	Labrus_bergylta
ENSSDUG00000023402	ncbp3	98	49.199	ENSLACG00000018791	NCBP3	99	51.402	Latimeria_chalumnae
ENSSDUG00000023402	ncbp3	99	61.484	ENSLOCG00000006706	ncbp3	99	61.435	Lepisosteus_oculatus
ENSSDUG00000023402	ncbp3	98	57.257	ENSLAFG00000002067	NCBP3	99	57.076	Loxodonta_africana
ENSSDUG00000023402	ncbp3	98	57.962	ENSMFAG00000024176	NCBP3	99	57.632	Macaca_fascicularis
ENSSDUG00000023402	ncbp3	98	57.962	ENSMMUG00000008556	NCBP3	99	57.632	Macaca_mulatta
ENSSDUG00000023402	ncbp3	97	57.051	ENSMNEG00000041374	NCBP3	95	56.709	Macaca_nemestrina
ENSSDUG00000023402	ncbp3	87	58.761	ENSMLEG00000034703	NCBP3	99	58.549	Mandrillus_leucophaeus
ENSSDUG00000023402	ncbp3	100	82.113	ENSMAMG00000022461	ncbp3	100	73.957	Mastacembelus_armatus
ENSSDUG00000023402	ncbp3	100	81.463	ENSMZEG00005027802	ncbp3	100	81.789	Maylandia_zebra
ENSSDUG00000023402	ncbp3	94	58.902	ENSMGAG00000004685	NCBP3	99	59.167	Meleagris_gallopavo
ENSSDUG00000023402	ncbp3	98	54.054	ENSMICG00000015798	NCBP3	99	53.643	Microcebus_murinus
ENSSDUG00000023402	ncbp3	98	57.416	ENSMOCG00000016446	Ncbp3	99	56.698	Microtus_ochrogaster
ENSSDUG00000023402	ncbp3	98	81.878	ENSMMOG00000012577	ncbp3	99	82.010	Mola_mola
ENSSDUG00000023402	ncbp3	98	75.819	ENSMALG00000009173	ncbp3	99	76.271	Monopterus_albus
ENSSDUG00000023402	ncbp3	98	58.400	MGP_CAROLIEiJ_G0016684	Ncbp3	99	58.502	Mus_caroli
ENSSDUG00000023402	ncbp3	98	58.400	ENSMUSG00000020783	Ncbp3	99	58.346	Mus_musculus
ENSSDUG00000023402	ncbp3	98	58.400	MGP_PahariEiJ_G0017817	Ncbp3	99	58.502	Mus_pahari
ENSSDUG00000023402	ncbp3	98	58.400	MGP_SPRETEiJ_G0017521	Ncbp3	99	58.346	Mus_spretus
ENSSDUG00000023402	ncbp3	97	56.290	ENSMPUG00000012357	NCBP3	95	56.180	Mustela_putorius_furo
ENSSDUG00000023402	ncbp3	98	55.806	ENSMLUG00000017060	NCBP3	99	56.260	Myotis_lucifugus
ENSSDUG00000023402	ncbp3	98	58.560	ENSNGAG00000020321	Ncbp3	99	58.658	Nannospalax_galili
ENSSDUG00000023402	ncbp3	100	60.000	ENSNBRG00000017354	ncbp3	95	77.448	Neolamprologus_brichardi
ENSSDUG00000023402	ncbp3	98	56.260	ENSNLEG00000017279	NCBP3	99	55.644	Nomascus_leucogenys
ENSSDUG00000023402	ncbp3	67	62.903	ENSMEUG00000015701	-	79	62.903	Notamacropus_eugenii
ENSSDUG00000023402	ncbp3	98	56.250	ENSOPRG00000016925	NCBP3	95	66.667	Ochotona_princeps
ENSSDUG00000023402	ncbp3	98	58.173	ENSODEG00000016617	NCBP3	99	57.969	Octodon_degus
ENSSDUG00000023402	ncbp3	100	77.072	ENSONIG00000007434	ncbp3	100	74.106	Oreochromis_niloticus
ENSSDUG00000023402	ncbp3	94	57.525	ENSOANG00000010109	NCBP3	95	59.030	Ornithorhynchus_anatinus
ENSSDUG00000023402	ncbp3	97	56.888	ENSOCUG00000008045	NCBP3	95	56.726	Oryctolagus_cuniculus
ENSSDUG00000023402	ncbp3	99	75.362	ENSORLG00000013703	ncbp3	100	74.018	Oryzias_latipes
ENSSDUG00000023402	ncbp3	99	74.096	ENSORLG00020011764	ncbp3	100	73.454	Oryzias_latipes_hni
ENSSDUG00000023402	ncbp3	99	74.385	ENSORLG00015018733	ncbp3	100	73.494	Oryzias_latipes_hsok
ENSSDUG00000023402	ncbp3	99	75.581	ENSOMEG00000017858	ncbp3	100	74.433	Oryzias_melastigma
ENSSDUG00000023402	ncbp3	98	56.757	ENSOGAG00000008803	NCBP3	99	57.032	Otolemur_garnettii
ENSSDUG00000023402	ncbp3	80	56.867	ENSOARG00000017750	NCBP3	99	57.885	Ovis_aries
ENSSDUG00000023402	ncbp3	98	57.845	ENSPPAG00000030530	NCBP3	99	56.744	Pan_paniscus
ENSSDUG00000023402	ncbp3	98	57.120	ENSPPRG00000022474	NCBP3	99	56.630	Panthera_pardus
ENSSDUG00000023402	ncbp3	89	57.672	ENSPTIG00000009607	NCBP3	91	57.118	Panthera_tigris_altaica
ENSSDUG00000023402	ncbp3	98	57.753	ENSPTRG00000008578	NCBP3	99	56.502	Pan_troglodytes
ENSSDUG00000023402	ncbp3	98	58.095	ENSPANG00000024364	NCBP3	99	57.298	Papio_anubis
ENSSDUG00000023402	ncbp3	91	68.533	ENSPKIG00000008466	ncbp3	87	65.333	Paramormyrops_kingsleyae
ENSSDUG00000023402	ncbp3	80	55.948	ENSPSIG00000013732	NCBP3	98	56.285	Pelodiscus_sinensis
ENSSDUG00000023402	ncbp3	99	62.680	ENSPMGG00000003344	ncbp3	95	64.538	Periophthalmus_magnuspinnatus
ENSSDUG00000023402	ncbp3	98	57.120	ENSPEMG00000007746	Ncbp3	99	56.719	Peromyscus_maniculatus_bairdii
ENSSDUG00000023402	ncbp3	100	56.308	ENSPCIG00000008605	NCBP3	96	68.750	Phascolarctos_cinereus
ENSSDUG00000023402	ncbp3	89	73.354	ENSPFOG00000000721	ncbp3	99	72.520	Poecilia_formosa
ENSSDUG00000023402	ncbp3	99	75.000	ENSPLAG00000015399	ncbp3	100	74.036	Poecilia_latipinna
ENSSDUG00000023402	ncbp3	99	74.037	ENSPMEG00000000896	ncbp3	100	74.036	Poecilia_mexicana
ENSSDUG00000023402	ncbp3	99	74.282	ENSPREG00000001681	ncbp3	100	73.512	Poecilia_reticulata
ENSSDUG00000023402	ncbp3	97	56.640	ENSPPYG00000007823	NCBP3	95	55.803	Pongo_abelii
ENSSDUG00000023402	ncbp3	100	53.145	ENSPCAG00000012614	NCBP3	99	53.052	Procavia_capensis
ENSSDUG00000023402	ncbp3	98	57.484	ENSPCOG00000016793	NCBP3	99	57.121	Propithecus_coquereli
ENSSDUG00000023402	ncbp3	97	51.876	ENSPVAG00000012746	NCBP3	91	66.667	Pteropus_vampyrus
ENSSDUG00000023402	ncbp3	100	74.012	ENSPNYG00000022677	ncbp3	100	73.828	Pundamilia_nyererei
ENSSDUG00000023402	ncbp3	99	66.191	ENSPNAG00000003219	ncbp3	99	64.244	Pygocentrus_nattereri
ENSSDUG00000023402	ncbp3	98	58.013	ENSRNOG00000018550	Ncbp3	99	57.837	Rattus_norvegicus
ENSSDUG00000023402	ncbp3	98	58.095	ENSRBIG00000033247	NCBP3	99	57.298	Rhinopithecus_bieti
ENSSDUG00000023402	ncbp3	98	58.095	ENSRROG00000043833	NCBP3	99	57.298	Rhinopithecus_roxellana
ENSSDUG00000023402	ncbp3	98	57.735	ENSSBOG00000023178	NCBP3	99	57.076	Saimiri_boliviensis_boliviensis
ENSSDUG00000023402	ncbp3	80	56.538	ENSSHAG00000003466	NCBP3	99	56.346	Sarcophilus_harrisii
ENSSDUG00000023402	ncbp3	100	61.270	ENSSFOG00015005808	ncbp3	99	61.514	Scleropages_formosus
ENSSDUG00000023402	ncbp3	99	78.348	ENSSMAG00000010917	ncbp3	100	78.230	Scophthalmus_maximus
ENSSDUG00000023402	ncbp3	100	72.926	ENSSLDG00000000742	ncbp3	100	73.396	Seriola_lalandi_dorsalis
ENSSDUG00000023402	ncbp3	86	63.978	ENSSARG00000006634	NCBP3	86	63.978	Sorex_araneus
ENSSDUG00000023402	ncbp3	100	55.000	ENSSPUG00000002240	NCBP3	99	55.346	Sphenodon_punctatus
ENSSDUG00000023402	ncbp3	100	84.203	ENSSPAG00000011223	ncbp3	100	83.639	Stegastes_partitus
ENSSDUG00000023402	ncbp3	98	57.372	ENSSSCG00000017870	NCBP3	99	57.812	Sus_scrofa
ENSSDUG00000023402	ncbp3	98	58.039	ENSTGUG00000005396	NCBP3	99	57.753	Taeniopygia_guttata
ENSSDUG00000023402	ncbp3	100	75.654	ENSTRUG00000003769	ncbp3	100	74.837	Takifugu_rubripes
ENSSDUG00000023402	ncbp3	100	73.498	ENSTNIG00000004776	ncbp3	100	74.303	Tetraodon_nigroviridis
ENSSDUG00000023402	ncbp3	98	53.355	ENSTBEG00000006308	NCBP3	99	52.804	Tupaia_belangeri
ENSSDUG00000023402	ncbp3	86	66.129	ENSTTRG00000005845	NCBP3	86	65.591	Tursiops_truncatus
ENSSDUG00000023402	ncbp3	98	55.469	ENSUAMG00000014043	NCBP3	99	55.573	Ursus_americanus
ENSSDUG00000023402	ncbp3	87	58.528	ENSUMAG00000007519	NCBP3	98	58.319	Ursus_maritimus
ENSSDUG00000023402	ncbp3	97	52.979	ENSVVUG00000026079	NCBP3	95	52.160	Vulpes_vulpes
ENSSDUG00000023402	ncbp3	100	50.232	ENSXETG00000012965	ncbp3	99	50.932	Xenopus_tropicalis
ENSSDUG00000023402	ncbp3	91	85.279	ENSXCOG00000018393	ncbp3	100	72.414	Xiphophorus_couchianus
ENSSDUG00000023402	ncbp3	99	74.964	ENSXMAG00000006849	ncbp3	100	74.179	Xiphophorus_maculatus