EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000023461 (Gene tree)
Gene ID: 111229709
Gene Symbol: snupn
Alias: rnut1|wu:fc41a03|zgc:77819
Full Name: snurportin 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 9204 bases
Position: chrBDQW01000242.1:5933419-5942622
Accession: 111229709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000032649	Snurportin1	PF11538.8	8.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000033208	-	2250	XM_022756156	ENSSDUP00000032649	373 (aa)	XP_022611877	UPI000BBE3931

Gene Model

Click here to download ENSSDUG00000023461's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000023461's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000023461	snupn	94	65.826	ENSG00000169371	SNUPN	100	77.778	Homo_sapiens
ENSSDUG00000023461	snupn	100	95.174	ENSAPOG00000016953	snupn	100	95.174	Acanthochromis_polyacanthus
ENSSDUG00000023461	snupn	95	66.017	ENSAMEG00000008291	SNUPN	96	66.574	Ailuropoda_melanoleuca
ENSSDUG00000023461	snupn	100	92.761	ENSACIG00000012409	snupn	100	92.761	Amphilophus_citrinellus
ENSSDUG00000023461	snupn	100	94.370	ENSAOCG00000018096	snupn	100	94.370	Amphiprion_ocellaris
ENSSDUG00000023461	snupn	100	94.370	ENSAPEG00000008834	snupn	100	94.370	Amphiprion_percula
ENSSDUG00000023461	snupn	100	94.638	ENSATEG00000021019	snupn	100	94.638	Anabas_testudineus
ENSSDUG00000023461	snupn	95	65.922	ENSANAG00000025568	SNUPN	96	67.039	Aotus_nancymaae
ENSSDUG00000023461	snupn	100	91.957	ENSACLG00000025155	snupn	100	91.957	Astatotilapia_calliptera
ENSSDUG00000023461	snupn	96	81.285	ENSAMXG00000038311	snupn	98	81.285	Astyanax_mexicanus
ENSSDUG00000023461	snupn	95	65.374	ENSBTAG00000021293	SNUPN	96	66.944	Bos_taurus
ENSSDUG00000023461	snupn	82	42.395	WBGene00017746	F23F1.5	88	42.395	Caenorhabditis_elegans
ENSSDUG00000023461	snupn	96	65.651	ENSCJAG00000003005	SNUPN	97	66.205	Callithrix_jacchus
ENSSDUG00000023461	snupn	95	65.730	ENSCAFG00000018035	SNUPN	96	66.106	Canis_familiaris
ENSSDUG00000023461	snupn	95	64.820	ENSCHIG00000018047	SNUPN	96	66.111	Capra_hircus
ENSSDUG00000023461	snupn	95	64.722	ENSTSYG00000037224	SNUPN	96	64.820	Carlito_syrichta
ENSSDUG00000023461	snupn	94	59.218	ENSCAPG00000005061	SNUPN	96	59.218	Cavia_aperea
ENSSDUG00000023461	snupn	94	67.507	ENSCPOG00000034772	SNUPN	96	67.507	Cavia_porcellus
ENSSDUG00000023461	snupn	95	65.922	ENSCCAG00000016169	-	96	67.039	Cebus_capucinus
ENSSDUG00000023461	snupn	95	64.917	ENSCATG00000039783	SNUPN	96	66.022	Cercocebus_atys
ENSSDUG00000023461	snupn	94	66.667	ENSCLAG00000016968	SNUPN	95	67.324	Chinchilla_lanigera
ENSSDUG00000023461	snupn	95	64.917	ENSCSAG00000014576	-	86	66.022	Chlorocebus_sabaeus
ENSSDUG00000023461	snupn	95	63.812	ENSCSAG00000019246	-	96	64.917	Chlorocebus_sabaeus
ENSSDUG00000023461	snupn	94	52.528	ENSCHOG00000005403	SNUPN	95	52.941	Choloepus_hoffmanni
ENSSDUG00000023461	snupn	94	67.967	ENSCPBG00000022172	SNUPN	91	67.967	Chrysemys_picta_bellii
ENSSDUG00000023461	snupn	95	65.193	ENSCANG00000029707	SNUPN	96	66.298	Colobus_angolensis_palliatus
ENSSDUG00000023461	snupn	95	66.111	ENSCGRG00001004622	Snupn	97	67.409	Cricetulus_griseus_chok1gshd
ENSSDUG00000023461	snupn	95	66.111	ENSCGRG00000002515	Snupn	97	67.409	Cricetulus_griseus_crigri
ENSSDUG00000023461	snupn	100	83.646	ENSCSEG00000003160	snupn	89	83.646	Cynoglossus_semilaevis
ENSSDUG00000023461	snupn	100	86.898	ENSCVAG00000010502	snupn	100	86.898	Cyprinodon_variegatus
ENSSDUG00000023461	snupn	99	75.067	ENSDARG00000008395	snupn	99	76.139	Danio_rerio
ENSSDUG00000023461	snupn	94	64.489	ENSDNOG00000044304	SNUPN	90	65.057	Dasypus_novemcinctus
ENSSDUG00000023461	snupn	95	64.641	ENSDORG00000009051	Snupn	96	65.470	Dipodomys_ordii
ENSSDUG00000023461	snupn	77	69.811	ENSETEG00000013792	SNUPN	81	69.811	Echinops_telfairi
ENSSDUG00000023461	snupn	97	52.815	ENSEBUG00000006682	snupn	96	52.815	Eptatretus_burgeri
ENSSDUG00000023461	snupn	95	65.556	ENSEASG00005015697	SNUPN	93	66.482	Equus_asinus_asinus
ENSSDUG00000023461	snupn	94	66.011	ENSECAG00000017726	SNUPN	95	66.947	Equus_caballus
ENSSDUG00000023461	snupn	66	65.746	ENSEEUG00000000981	-	65	67.403	Erinaceus_europaeus
ENSSDUG00000023461	snupn	99	79.221	ENSELUG00000023305	snupn	99	80.000	Esox_lucius
ENSSDUG00000023461	snupn	95	65.278	ENSFCAG00000040981	SNUPN	96	65.833	Felis_catus
ENSSDUG00000023461	snupn	94	67.227	ENSFDAG00000011599	SNUPN	96	67.227	Fukomys_damarensis
ENSSDUG00000023461	snupn	100	90.885	ENSFHEG00000017627	snupn	100	90.885	Fundulus_heteroclitus
ENSSDUG00000023461	snupn	94	83.143	ENSGMOG00000009272	snupn	100	84.900	Gadus_morhua
ENSSDUG00000023461	snupn	89	62.463	ENSGALG00000029537	SNUPN	95	62.396	Gallus_gallus
ENSSDUG00000023461	snupn	100	89.305	ENSGAFG00000004954	snupn	100	89.305	Gambusia_affinis
ENSSDUG00000023461	snupn	94	94.000	ENSGACG00000007450	snupn	100	94.000	Gasterosteus_aculeatus
ENSSDUG00000023461	snupn	96	66.213	ENSGAGG00000022470	SNUPN	97	67.120	Gopherus_agassizii
ENSSDUG00000023461	snupn	57	65.079	ENSGGOG00000004581	-	100	65.079	Gorilla_gorilla
ENSSDUG00000023461	snupn	100	92.493	ENSHBUG00000006950	snupn	100	92.493	Haplochromis_burtoni
ENSSDUG00000023461	snupn	94	66.479	ENSHGLG00000000536	SNUPN	96	66.573	Heterocephalus_glaber_female
ENSSDUG00000023461	snupn	94	66.479	ENSHGLG00100016161	SNUPN	96	66.573	Heterocephalus_glaber_male
ENSSDUG00000023461	snupn	99	85.411	ENSHCOG00000007262	snupn	99	85.676	Hippocampus_comes
ENSSDUG00000023461	snupn	96	79.888	ENSIPUG00000014460	Snupn	98	79.888	Ictalurus_punctatus
ENSSDUG00000023461	snupn	94	65.352	ENSSTOG00000005904	SNUPN	95	66.292	Ictidomys_tridecemlineatus
ENSSDUG00000023461	snupn	100	81.501	ENSKMAG00000009957	snupn	100	81.769	Kryptolebias_marmoratus
ENSSDUG00000023461	snupn	100	91.534	ENSLBEG00000020694	snupn	100	92.328	Labrus_bergylta
ENSSDUG00000023461	snupn	96	64.722	ENSLACG00000015801	SNUPN	97	66.116	Latimeria_chalumnae
ENSSDUG00000023461	snupn	94	80.000	ENSLOCG00000015064	snupn	95	80.000	Lepisosteus_oculatus
ENSSDUG00000023461	snupn	95	64.722	ENSLAFG00000004422	SNUPN	96	65.556	Loxodonta_africana
ENSSDUG00000023461	snupn	66	77.778	ENSMFAG00000003706	SNUPN	96	64.246	Macaca_fascicularis
ENSSDUG00000023461	snupn	95	65.193	ENSMMUG00000004784	SNUPN	96	66.298	Macaca_mulatta
ENSSDUG00000023461	snupn	95	60.942	ENSMLEG00000041966	SNUPN	96	60.942	Mandrillus_leucophaeus
ENSSDUG00000023461	snupn	100	93.566	ENSMAMG00000023109	snupn	100	93.566	Mastacembelus_armatus
ENSSDUG00000023461	snupn	100	92.225	ENSMZEG00005010806	snupn	100	92.225	Maylandia_zebra
ENSSDUG00000023461	snupn	95	66.205	ENSMAUG00000020426	Snupn	97	67.500	Mesocricetus_auratus
ENSSDUG00000023461	snupn	95	64.641	ENSMICG00000016438	SNUPN	96	66.205	Microcebus_murinus
ENSSDUG00000023461	snupn	95	66.667	ENSMOCG00000014238	Snupn	97	66.667	Microtus_ochrogaster
ENSSDUG00000023461	snupn	100	91.444	ENSMMOG00000001321	snupn	100	92.513	Mola_mola
ENSSDUG00000023461	snupn	96	65.041	ENSMODG00000008852	SNUPN	97	65.041	Monodelphis_domestica
ENSSDUG00000023461	snupn	100	90.349	ENSMALG00000015058	snupn	100	90.349	Monopterus_albus
ENSSDUG00000023461	snupn	94	66.573	MGP_CAROLIEiJ_G0032259	Snupn	96	67.606	Mus_caroli
ENSSDUG00000023461	snupn	94	66.292	ENSMUSG00000055334	Snupn	96	66.854	Mus_musculus
ENSSDUG00000023461	snupn	94	66.573	MGP_PahariEiJ_G0015126	Snupn	96	67.606	Mus_pahari
ENSSDUG00000023461	snupn	94	66.292	MGP_SPRETEiJ_G0033399	Snupn	96	66.854	Mus_spretus
ENSSDUG00000023461	snupn	96	64.324	ENSMPUG00000017324	SNUPN	99	64.690	Mustela_putorius_furo
ENSSDUG00000023461	snupn	94	54.875	ENSMLUG00000000038	-	99	55.989	Myotis_lucifugus
ENSSDUG00000023461	snupn	94	64.804	ENSMLUG00000027517	-	95	65.922	Myotis_lucifugus
ENSSDUG00000023461	snupn	95	60.665	ENSMLUG00000027485	-	96	61.602	Myotis_lucifugus
ENSSDUG00000023461	snupn	95	64.903	ENSNGAG00000018735	Snupn	96	66.389	Nannospalax_galili
ENSSDUG00000023461	snupn	100	92.225	ENSNBRG00000017919	snupn	100	92.225	Neolamprologus_brichardi
ENSSDUG00000023461	snupn	63	75.000	ENSNLEG00000035240	-	78	75.000	Nomascus_leucogenys
ENSSDUG00000023461	snupn	95	54.167	ENSOPRG00000015889	-	96	54.722	Ochotona_princeps
ENSSDUG00000023461	snupn	88	55.556	ENSODEG00000014491	SNUPN	94	55.689	Octodon_degus
ENSSDUG00000023461	snupn	98	93.132	ENSONIG00000012855	snupn	100	93.132	Oreochromis_niloticus
ENSSDUG00000023461	snupn	95	64.722	ENSOCUG00000008801	SNUPN	96	65.651	Oryctolagus_cuniculus
ENSSDUG00000023461	snupn	100	88.472	ENSORLG00000001836	snupn	100	88.472	Oryzias_latipes
ENSSDUG00000023461	snupn	99	88.172	ENSORLG00020021175	snupn	99	88.172	Oryzias_latipes_hni
ENSSDUG00000023461	snupn	100	88.204	ENSORLG00015014444	snupn	99	88.204	Oryzias_latipes_hsok
ENSSDUG00000023461	snupn	100	88.204	ENSOMEG00000004853	snupn	100	88.204	Oryzias_melastigma
ENSSDUG00000023461	snupn	95	63.435	ENSOGAG00000004915	SNUPN	96	64.365	Otolemur_garnettii
ENSSDUG00000023461	snupn	95	65.097	ENSOARG00000001991	SNUPN	93	66.389	Ovis_aries
ENSSDUG00000023461	snupn	98	64.267	ENSPPAG00000034351	SNUPN	95	66.947	Pan_paniscus
ENSSDUG00000023461	snupn	95	65.460	ENSPPRG00000023192	SNUPN	96	66.017	Panthera_pardus
ENSSDUG00000023461	snupn	95	65.460	ENSPTIG00000003528	SNUPN	96	66.017	Panthera_tigris_altaica
ENSSDUG00000023461	snupn	98	64.267	ENSPTRG00000007302	SNUPN	95	66.947	Pan_troglodytes
ENSSDUG00000023461	snupn	95	56.906	ENSPANG00000034514	SNUPN	96	58.011	Papio_anubis
ENSSDUG00000023461	snupn	94	77.557	ENSPKIG00000012444	snupn	96	79.037	Paramormyrops_kingsleyae
ENSSDUG00000023461	snupn	94	67.222	ENSPSIG00000015229	SNUPN	95	67.222	Pelodiscus_sinensis
ENSSDUG00000023461	snupn	94	81.180	ENSPMGG00000023843	snupn	95	81.180	Periophthalmus_magnuspinnatus
ENSSDUG00000023461	snupn	94	64.888	ENSPCIG00000007854	SNUPN	95	64.888	Phascolarctos_cinereus
ENSSDUG00000023461	snupn	100	91.153	ENSPFOG00000014221	snupn	99	91.153	Poecilia_formosa
ENSSDUG00000023461	snupn	100	91.153	ENSPLAG00000002339	snupn	99	91.153	Poecilia_latipinna
ENSSDUG00000023461	snupn	100	90.617	ENSPMEG00000012436	snupn	99	90.617	Poecilia_mexicana
ENSSDUG00000023461	snupn	100	90.349	ENSPREG00000012683	snupn	99	90.349	Poecilia_reticulata
ENSSDUG00000023461	snupn	94	58.263	ENSPPYG00000006663	SNUPN	94	59.104	Pongo_abelii
ENSSDUG00000023461	snupn	94	65.169	ENSPCOG00000025482	SNUPN	95	66.761	Propithecus_coquereli
ENSSDUG00000023461	snupn	94	64.607	ENSPVAG00000010035	SNUPN	96	64.266	Pteropus_vampyrus
ENSSDUG00000023461	snupn	100	92.493	ENSPNYG00000008752	snupn	100	92.493	Pundamilia_nyererei
ENSSDUG00000023461	snupn	96	80.726	ENSPNAG00000026875	snupn	98	80.726	Pygocentrus_nattereri
ENSSDUG00000023461	snupn	94	66.292	ENSRNOG00000005426	Snupn	96	67.606	Rattus_norvegicus
ENSSDUG00000023461	snupn	95	65.193	ENSRBIG00000038665	SNUPN	96	66.298	Rhinopithecus_bieti
ENSSDUG00000023461	snupn	95	65.193	ENSRROG00000043625	SNUPN	96	66.298	Rhinopithecus_roxellana
ENSSDUG00000023461	snupn	95	66.201	ENSSBOG00000029086	-	96	67.318	Saimiri_boliviensis_boliviensis
ENSSDUG00000023461	snupn	89	82.635	ENSSFOG00015022264	snupn	66	82.635	Scleropages_formosus
ENSSDUG00000023461	snupn	99	95.430	ENSSMAG00000005485	snupn	99	95.430	Scophthalmus_maximus
ENSSDUG00000023461	snupn	100	99.732	ENSSLDG00000001425	snupn	100	99.732	Seriola_lalandi_dorsalis
ENSSDUG00000023461	snupn	94	54.775	ENSSARG00000005585	SNUPN	94	56.022	Sorex_araneus
ENSSDUG00000023461	snupn	94	65.738	ENSSPUG00000014331	SNUPN	95	66.852	Sphenodon_punctatus
ENSSDUG00000023461	snupn	100	94.638	ENSSPAG00000001216	snupn	100	94.638	Stegastes_partitus
ENSSDUG00000023461	snupn	95	65.374	ENSSSCG00000001877	SNUPN	96	66.667	Sus_scrofa
ENSSDUG00000023461	snupn	100	89.008	ENSTRUG00000016085	snupn	98	89.008	Takifugu_rubripes
ENSSDUG00000023461	snupn	93	72.881	ENSTNIG00000008456	snupn	100	74.294	Tetraodon_nigroviridis
ENSSDUG00000023461	snupn	94	63.866	ENSTBEG00000002434	SNUPN	95	63.866	Tupaia_belangeri
ENSSDUG00000023461	snupn	95	58.726	ENSTTRG00000011484	SNUPN	96	60.278	Tursiops_truncatus
ENSSDUG00000023461	snupn	95	66.017	ENSUAMG00000022723	SNUPN	96	66.574	Ursus_americanus
ENSSDUG00000023461	snupn	95	66.295	ENSUMAG00000003738	SNUPN	96	66.852	Ursus_maritimus
ENSSDUG00000023461	snupn	95	64.426	ENSVVUG00000019574	SNUPN	96	65.266	Vulpes_vulpes
ENSSDUG00000023461	snupn	94	67.330	ENSXETG00000015280	snupn	99	67.330	Xenopus_tropicalis
ENSSDUG00000023461	snupn	100	90.349	ENSXMAG00000006634	snupn	100	90.349	Xiphophorus_maculatus