EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000023568 (Gene tree)
Gene ID: 111217824
Gene Symbol: ddx55
Alias: chunp6861|fc32a12|kiaa1595|wu:fc32a12
Full Name: DEAD-box helicase 55
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 7170 bases
Position: chrBDQW01000047.1:889307-896476
Accession: 111217824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000032792	ResIII	PF04851.15	8.1e-08	1	1
ENSSDUP00000032789	ResIII	PF04851.15	9e-08	1	1
ENSSDUP00000032792	DEAD	PF00270.29	9.5e-43	1	1
ENSSDUP00000032789	DEAD	PF00270.29	1e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000033351	-	4228	XM_022739806	ENSSDUP00000032789	599 (aa)	XP_022595527	UPI000BBEDDC3
ENSSDUT00000033354	-	1707	-	ENSSDUP00000032792	568 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000023568's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000023568's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000023568	ddx55	67	34.058	ENSSDUG00000008456	fam193b	63	34.058
ENSSDUG00000023568	ddx55	60	34.121	ENSSDUG00000004279	-	58	34.121
ENSSDUG00000023568	ddx55	74	38.117	ENSSDUG00000018245	ddx10	51	38.117
ENSSDUG00000023568	ddx55	60	33.693	ENSSDUG00000020428	-	54	33.693
ENSSDUG00000023568	ddx55	65	30.660	ENSSDUG00000022459	ddx23	55	30.660
ENSSDUG00000023568	ddx55	60	32.603	ENSSDUG00000016136	-	71	32.698
ENSSDUG00000023568	ddx55	58	31.461	ENSSDUG00000007138	kif14	53	31.742
ENSSDUG00000023568	ddx55	76	37.500	ENSSDUG00000005957	ddx18	65	37.500
ENSSDUG00000023568	ddx55	73	30.178	ENSSDUG00000011751	ddx31	89	30.375
ENSSDUG00000023568	ddx55	61	31.335	ENSSDUG00000021512	eif4a3	84	31.335
ENSSDUG00000023568	ddx55	59	32.022	ENSSDUG00000007530	-	68	32.022
ENSSDUG00000023568	ddx55	65	30.846	ENSSDUG00000009696	ddx49	76	30.846
ENSSDUG00000023568	ddx55	59	32.865	ENSSDUG00000009713	ddx61	68	32.865
ENSSDUG00000023568	ddx55	59	33.146	ENSSDUG00000019695	ddx6	69	33.146
ENSSDUG00000023568	ddx55	63	30.254	ENSSDUG00000001495	ddx51	63	30.254
ENSSDUG00000023568	ddx55	60	31.830	ENSSDUG00000019456	DDX5	62	30.365
ENSSDUG00000023568	ddx55	60	32.703	ENSSDUG00000022015	ddx4	56	32.703
ENSSDUG00000023568	ddx55	60	34.837	ENSSDUG00000013166	-	55	34.837
ENSSDUG00000023568	ddx55	59	36.490	ENSSDUG00000018110	ddx47	64	36.212
ENSSDUG00000023568	ddx55	62	43.077	ENSSDUG00000012334	ddx1	55	43.077

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000023568	ddx55	99	72.500	ENSG00000111364	DDX55	99	72.500	Homo_sapiens
ENSSDUG00000023568	ddx55	98	90.153	ENSAPOG00000013126	ddx55	99	90.153	Acanthochromis_polyacanthus
ENSSDUG00000023568	ddx55	99	70.833	ENSAMEG00000015274	DDX55	99	70.833	Ailuropoda_melanoleuca
ENSSDUG00000023568	ddx55	98	88.265	ENSACIG00000007580	ddx55	99	88.265	Amphilophus_citrinellus
ENSSDUG00000023568	ddx55	98	89.949	ENSAOCG00000012037	ddx55	93	89.949	Amphiprion_ocellaris
ENSSDUG00000023568	ddx55	98	89.949	ENSAPEG00000011003	ddx55	93	89.949	Amphiprion_percula
ENSSDUG00000023568	ddx55	99	87.584	ENSATEG00000004029	ddx55	99	87.584	Anabas_testudineus
ENSSDUG00000023568	ddx55	93	71.964	ENSAPLG00000015032	DDX55	99	71.964	Anas_platyrhynchos
ENSSDUG00000023568	ddx55	99	71.786	ENSACAG00000015296	DDX55	99	71.786	Anolis_carolinensis
ENSSDUG00000023568	ddx55	99	58.167	ENSANAG00000034064	DDX55	99	68.820	Aotus_nancymaae
ENSSDUG00000023568	ddx55	98	87.267	ENSACLG00000024691	ddx55	99	87.267	Astatotilapia_calliptera
ENSSDUG00000023568	ddx55	98	78.276	ENSAMXG00000019947	ddx55	97	78.276	Astyanax_mexicanus
ENSSDUG00000023568	ddx55	99	72.027	ENSBTAG00000007266	DDX55	99	68.174	Bos_taurus
ENSSDUG00000023568	ddx55	90	36.460	WBGene00013983	ZK512.2	97	36.557	Caenorhabditis_elegans
ENSSDUG00000023568	ddx55	99	72.000	ENSCJAG00000020471	-	99	72.000	Callithrix_jacchus
ENSSDUG00000023568	ddx55	99	71.048	ENSCAFG00000007452	DDX55	99	71.048	Canis_familiaris
ENSSDUG00000023568	ddx55	90	72.978	ENSCAFG00020015254	DDX55	97	72.978	Canis_lupus_dingo
ENSSDUG00000023568	ddx55	98	72.128	ENSCHIG00000020402	DDX55	98	72.128	Capra_hircus
ENSSDUG00000023568	ddx55	99	70.833	ENSTSYG00000007427	DDX55	99	70.833	Carlito_syrichta
ENSSDUG00000023568	ddx55	94	73.016	ENSCAPG00000005124	DDX55	94	74.681	Cavia_aperea
ENSSDUG00000023568	ddx55	96	74.093	ENSCPOG00000010015	DDX55	96	74.093	Cavia_porcellus
ENSSDUG00000023568	ddx55	99	71.167	ENSCCAG00000021652	DDX55	99	72.167	Cebus_capucinus
ENSSDUG00000023568	ddx55	99	68.627	ENSCATG00000034315	DDX55	99	68.627	Cercocebus_atys
ENSSDUG00000023568	ddx55	99	72.833	ENSCLAG00000011203	DDX55	99	72.833	Chinchilla_lanigera
ENSSDUG00000023568	ddx55	99	72.000	ENSCSAG00000002057	DDX55	99	72.000	Chlorocebus_sabaeus
ENSSDUG00000023568	ddx55	87	76.336	ENSCPBG00000025960	DDX55	99	75.413	Chrysemys_picta_bellii
ENSSDUG00000023568	ddx55	98	52.764	ENSCING00000009622	-	99	52.764	Ciona_intestinalis
ENSSDUG00000023568	ddx55	97	52.041	ENSCSAVG00000003375	-	99	52.381	Ciona_savignyi
ENSSDUG00000023568	ddx55	99	72.167	ENSCANG00000000156	DDX55	99	72.167	Colobus_angolensis_palliatus
ENSSDUG00000023568	ddx55	99	73.045	ENSCGRG00001001652	Ddx55	99	73.045	Cricetulus_griseus_chok1gshd
ENSSDUG00000023568	ddx55	99	73.045	ENSCGRG00000014742	Ddx55	99	73.045	Cricetulus_griseus_crigri
ENSSDUG00000023568	ddx55	99	85.403	ENSCSEG00000012161	ddx55	99	85.403	Cynoglossus_semilaevis
ENSSDUG00000023568	ddx55	98	85.085	ENSCVAG00000006635	ddx55	99	85.085	Cyprinodon_variegatus
ENSSDUG00000023568	ddx55	99	81.113	ENSDARG00000009864	ddx55	99	81.113	Danio_rerio
ENSSDUG00000023568	ddx55	98	72.758	ENSDNOG00000005167	DDX55	97	72.758	Dasypus_novemcinctus
ENSSDUG00000023568	ddx55	95	48.287	FBgn0037561	CG9630	98	48.450	Drosophila_melanogaster
ENSSDUG00000023568	ddx55	92	61.982	ENSETEG00000001826	DDX55	98	61.552	Echinops_telfairi
ENSSDUG00000023568	ddx55	97	60.768	ENSEBUG00000007071	ddx55	100	61.279	Eptatretus_burgeri
ENSSDUG00000023568	ddx55	98	72.513	ENSEASG00005012650	DDX55	100	73.441	Equus_asinus_asinus
ENSSDUG00000023568	ddx55	87	73.473	ENSECAG00000011237	DDX55	87	72.978	Equus_caballus
ENSSDUG00000023568	ddx55	97	63.373	ENSEEUG00000006313	DDX55	98	63.373	Erinaceus_europaeus
ENSSDUG00000023568	ddx55	98	81.387	ENSELUG00000002616	ddx55	98	81.387	Esox_lucius
ENSSDUG00000023568	ddx55	97	73.504	ENSFCAG00000003770	DDX55	97	73.504	Felis_catus
ENSSDUG00000023568	ddx55	99	73.244	ENSFALG00000009300	DDX55	100	73.244	Ficedula_albicollis
ENSSDUG00000023568	ddx55	98	72.466	ENSFDAG00000004680	DDX55	99	72.466	Fukomys_damarensis
ENSSDUG00000023568	ddx55	97	85.274	ENSFHEG00000007912	ddx55	99	85.274	Fundulus_heteroclitus
ENSSDUG00000023568	ddx55	97	77.172	ENSGMOG00000017762	ddx55	97	77.740	Gadus_morhua
ENSSDUG00000023568	ddx55	98	73.906	ENSGALG00000003298	DDX55	100	73.906	Gallus_gallus
ENSSDUG00000023568	ddx55	96	85.862	ENSGAFG00000004388	ddx55	99	85.714	Gambusia_affinis
ENSSDUG00000023568	ddx55	97	85.616	ENSGACG00000015591	ddx55	95	85.616	Gasterosteus_aculeatus
ENSSDUG00000023568	ddx55	90	75.735	ENSGAGG00000014403	DDX55	99	75.735	Gopherus_agassizii
ENSSDUG00000023568	ddx55	99	72.333	ENSGGOG00000026102	DDX55	99	72.333	Gorilla_gorilla
ENSSDUG00000023568	ddx55	98	87.267	ENSHBUG00000011523	ddx55	99	87.267	Haplochromis_burtoni
ENSSDUG00000023568	ddx55	98	72.496	ENSHGLG00000019202	DDX55	98	72.496	Heterocephalus_glaber_female
ENSSDUG00000023568	ddx55	98	72.496	ENSHGLG00100019440	DDX55	98	72.496	Heterocephalus_glaber_male
ENSSDUG00000023568	ddx55	96	75.588	ENSHCOG00000004710	ddx55	99	75.588	Hippocampus_comes
ENSSDUG00000023568	ddx55	97	80.612	ENSIPUG00000014551	ddx55	97	80.612	Ictalurus_punctatus
ENSSDUG00000023568	ddx55	98	72.175	ENSSTOG00000006121	DDX55	99	72.175	Ictidomys_tridecemlineatus
ENSSDUG00000023568	ddx55	97	73.846	ENSJJAG00000013401	Ddx55	97	73.846	Jaculus_jaculus
ENSSDUG00000023568	ddx55	98	85.085	ENSKMAG00000022006	ddx55	99	85.085	Kryptolebias_marmoratus
ENSSDUG00000023568	ddx55	99	86.855	ENSLBEG00000021815	ddx55	100	86.855	Labrus_bergylta
ENSSDUG00000023568	ddx55	98	76.094	ENSLACG00000017050	DDX55	99	76.094	Latimeria_chalumnae
ENSSDUG00000023568	ddx55	99	79.833	ENSLOCG00000005828	ddx55	99	79.833	Lepisosteus_oculatus
ENSSDUG00000023568	ddx55	98	73.220	ENSLAFG00000007293	DDX55	98	73.220	Loxodonta_africana
ENSSDUG00000023568	ddx55	99	72.333	ENSMFAG00000038165	DDX55	99	72.333	Macaca_fascicularis
ENSSDUG00000023568	ddx55	99	72.333	ENSMMUG00000013178	DDX55	99	72.333	Macaca_mulatta
ENSSDUG00000023568	ddx55	99	72.333	ENSMNEG00000028630	DDX55	99	72.333	Macaca_nemestrina
ENSSDUG00000023568	ddx55	99	72.500	ENSMLEG00000039187	DDX55	99	72.500	Mandrillus_leucophaeus
ENSSDUG00000023568	ddx55	99	87.874	ENSMAMG00000011297	ddx55	100	87.874	Mastacembelus_armatus
ENSSDUG00000023568	ddx55	98	87.267	ENSMZEG00005008047	ddx55	99	87.267	Maylandia_zebra
ENSSDUG00000023568	ddx55	99	70.352	ENSMGAG00000003185	DDX55	99	70.968	Meleagris_gallopavo
ENSSDUG00000023568	ddx55	99	72.213	ENSMAUG00000020054	Ddx55	99	72.213	Mesocricetus_auratus
ENSSDUG00000023568	ddx55	97	66.847	ENSMICG00000006477	DDX55	97	66.847	Microcebus_murinus
ENSSDUG00000023568	ddx55	97	73.675	ENSMOCG00000021289	Ddx55	97	73.675	Microtus_ochrogaster
ENSSDUG00000023568	ddx55	98	88.265	ENSMMOG00000009411	ddx55	98	88.265	Mola_mola
ENSSDUG00000023568	ddx55	92	74.910	ENSMODG00000012519	DDX55	96	74.910	Monodelphis_domestica
ENSSDUG00000023568	ddx55	99	86.819	ENSMALG00000018543	ddx55	100	86.819	Monopterus_albus
ENSSDUG00000023568	ddx55	74	76.233	MGP_CAROLIEiJ_G0027755	-	99	76.233	Mus_caroli
ENSSDUG00000023568	ddx55	99	72.379	ENSMUSG00000029389	Ddx55	99	72.379	Mus_musculus
ENSSDUG00000023568	ddx55	99	70.383	MGP_PahariEiJ_G0024335	Ddx55	99	70.383	Mus_pahari
ENSSDUG00000023568	ddx55	99	72.213	MGP_SPRETEiJ_G0028753	Ddx55	99	72.213	Mus_spretus
ENSSDUG00000023568	ddx55	97	69.454	ENSMPUG00000001505	DDX55	97	69.454	Mustela_putorius_furo
ENSSDUG00000023568	ddx55	87	62.333	ENSMLUG00000025148	-	100	62.063	Myotis_lucifugus
ENSSDUG00000023568	ddx55	99	64.000	ENSMLUG00000001265	-	99	64.000	Myotis_lucifugus
ENSSDUG00000023568	ddx55	99	71.333	ENSNGAG00000020564	Ddx55	99	71.333	Nannospalax_galili
ENSSDUG00000023568	ddx55	98	87.606	ENSNBRG00000018748	ddx55	99	87.606	Neolamprologus_brichardi
ENSSDUG00000023568	ddx55	99	72.333	ENSNLEG00000001658	DDX55	100	72.333	Nomascus_leucogenys
ENSSDUG00000023568	ddx55	99	69.884	ENSMEUG00000013689	DDX55	98	71.138	Notamacropus_eugenii
ENSSDUG00000023568	ddx55	99	72.027	ENSOPRG00000000850	DDX55	99	72.027	Ochotona_princeps
ENSSDUG00000023568	ddx55	93	59.498	ENSODEG00000016592	-	100	60.394	Octodon_degus
ENSSDUG00000023568	ddx55	99	71.933	ENSODEG00000009632	-	100	71.933	Octodon_degus
ENSSDUG00000023568	ddx55	98	86.927	ENSONIG00000015311	ddx55	98	86.927	Oreochromis_niloticus
ENSSDUG00000023568	ddx55	92	74.194	ENSOANG00000015332	DDX55	98	74.194	Ornithorhynchus_anatinus
ENSSDUG00000023568	ddx55	97	73.973	ENSOCUG00000003456	DDX55	97	73.973	Oryctolagus_cuniculus
ENSSDUG00000023568	ddx55	98	82.373	ENSORLG00000029482	ddx55	99	82.373	Oryzias_latipes
ENSSDUG00000023568	ddx55	98	81.864	ENSORLG00015004885	ddx55	98	83.119	Oryzias_latipes_hsok
ENSSDUG00000023568	ddx55	97	82.877	ENSOMEG00000023619	ddx55	98	82.877	Oryzias_melastigma
ENSSDUG00000023568	ddx55	98	71.115	ENSOGAG00000009195	DDX55	98	71.115	Otolemur_garnettii
ENSSDUG00000023568	ddx55	97	73.333	ENSOARG00000003364	DDX55	97	73.333	Ovis_aries
ENSSDUG00000023568	ddx55	99	72.667	ENSPPAG00000005988	DDX55	99	72.667	Pan_paniscus
ENSSDUG00000023568	ddx55	99	71.714	ENSPPRG00000012157	DDX55	99	71.714	Panthera_pardus
ENSSDUG00000023568	ddx55	91	74.681	ENSPTIG00000011490	DDX55	91	74.681	Panthera_tigris_altaica
ENSSDUG00000023568	ddx55	99	72.500	ENSPTRG00000005601	DDX55	99	72.500	Pan_troglodytes
ENSSDUG00000023568	ddx55	99	72.500	ENSPANG00000007905	DDX55	99	72.500	Papio_anubis
ENSSDUG00000023568	ddx55	97	79.966	ENSPKIG00000023661	ddx55	99	79.966	Paramormyrops_kingsleyae
ENSSDUG00000023568	ddx55	92	75.763	ENSPSIG00000012901	DDX55	98	76.710	Pelodiscus_sinensis
ENSSDUG00000023568	ddx55	90	81.801	ENSPMGG00000017224	ddx55	100	81.801	Periophthalmus_magnuspinnatus
ENSSDUG00000023568	ddx55	99	72.379	ENSPEMG00000018052	Ddx55	99	72.379	Peromyscus_maniculatus_bairdii
ENSSDUG00000023568	ddx55	86	64.272	ENSPMAG00000007486	ddx55	100	65.134	Petromyzon_marinus
ENSSDUG00000023568	ddx55	87	74.379	ENSPCIG00000010973	DDX55	98	74.033	Phascolarctos_cinereus
ENSSDUG00000023568	ddx55	96	85.911	ENSPFOG00000006970	ddx55	91	85.763	Poecilia_formosa
ENSSDUG00000023568	ddx55	96	85.862	ENSPLAG00000014735	ddx55	99	85.714	Poecilia_latipinna
ENSSDUG00000023568	ddx55	96	86.059	ENSPMEG00000020635	ddx55	99	86.059	Poecilia_mexicana
ENSSDUG00000023568	ddx55	96	86.034	ENSPREG00000016644	ddx55	99	85.886	Poecilia_reticulata
ENSSDUG00000023568	ddx55	99	70.833	ENSPPYG00000005091	DDX55	99	70.833	Pongo_abelii
ENSSDUG00000023568	ddx55	97	73.630	ENSPCAG00000014127	DDX55	97	73.549	Procavia_capensis
ENSSDUG00000023568	ddx55	99	71.167	ENSPCOG00000011189	DDX55	99	71.167	Propithecus_coquereli
ENSSDUG00000023568	ddx55	97	72.184	ENSPVAG00000015321	DDX55	98	72.184	Pteropus_vampyrus
ENSSDUG00000023568	ddx55	98	87.097	ENSPNYG00000003669	ddx55	99	87.097	Pundamilia_nyererei
ENSSDUG00000023568	ddx55	98	81.803	ENSPNAG00000012855	ddx55	98	81.803	Pygocentrus_nattereri
ENSSDUG00000023568	ddx55	99	72.379	ENSRNOG00000001043	Ddx55	99	72.379	Rattus_norvegicus
ENSSDUG00000023568	ddx55	99	71.833	ENSRBIG00000044699	DDX55	99	71.833	Rhinopithecus_bieti
ENSSDUG00000023568	ddx55	99	72.000	ENSRROG00000024824	DDX55	99	72.000	Rhinopithecus_roxellana
ENSSDUG00000023568	ddx55	89	37.018	YFL002C	-	97	36.439	Saccharomyces_cerevisiae
ENSSDUG00000023568	ddx55	99	71.667	ENSSBOG00000024833	DDX55	99	72.333	Saimiri_boliviensis_boliviensis
ENSSDUG00000023568	ddx55	93	74.555	ENSSHAG00000015820	DDX55	98	74.955	Sarcophilus_harrisii
ENSSDUG00000023568	ddx55	97	81.942	ENSSFOG00015017496	ddx55	96	81.942	Scleropages_formosus
ENSSDUG00000023568	ddx55	98	89.831	ENSSMAG00000010441	ddx55	98	90.000	Scophthalmus_maximus
ENSSDUG00000023568	ddx55	100	98.246	ENSSLDG00000011299	ddx55	100	98.246	Seriola_lalandi_dorsalis
ENSSDUG00000023568	ddx55	90	72.356	ENSSARG00000003842	DDX55	98	72.810	Sorex_araneus
ENSSDUG00000023568	ddx55	97	74.660	ENSSPUG00000012798	DDX55	98	74.660	Sphenodon_punctatus
ENSSDUG00000023568	ddx55	99	88.384	ENSSPAG00000011806	ddx55	99	88.384	Stegastes_partitus
ENSSDUG00000023568	ddx55	87	74.379	ENSSSCG00000009771	DDX55	99	73.540	Sus_scrofa
ENSSDUG00000023568	ddx55	96	74.310	ENSTGUG00000005302	-	99	73.818	Taeniopygia_guttata
ENSSDUG00000023568	ddx55	98	85.349	ENSTRUG00000018525	ddx55	98	85.349	Takifugu_rubripes
ENSSDUG00000023568	ddx55	96	84.138	ENSTNIG00000013515	DDX55	96	84.138	Tetraodon_nigroviridis
ENSSDUG00000023568	ddx55	74	68.989	ENSTBEG00000010822	DDX55	100	68.989	Tupaia_belangeri
ENSSDUG00000023568	ddx55	99	71.333	ENSTTRG00000007251	DDX55	99	71.333	Tursiops_truncatus
ENSSDUG00000023568	ddx55	99	70.549	ENSUAMG00000012589	DDX55	99	70.549	Ursus_americanus
ENSSDUG00000023568	ddx55	92	71.505	ENSUMAG00000003869	DDX55	99	71.505	Ursus_maritimus
ENSSDUG00000023568	ddx55	92	66.427	ENSVPAG00000007028	DDX55	99	66.427	Vicugna_pacos
ENSSDUG00000023568	ddx55	99	70.882	ENSVVUG00000027506	DDX55	99	73.747	Vulpes_vulpes
ENSSDUG00000023568	ddx55	99	73.500	ENSXETG00000005825	ddx55	100	73.500	Xenopus_tropicalis
ENSSDUG00000023568	ddx55	96	85.172	ENSXCOG00000010120	ddx55	99	85.026	Xiphophorus_couchianus
ENSSDUG00000023568	ddx55	96	85.690	ENSXMAG00000011731	ddx55	98	85.690	Xiphophorus_maculatus