EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000023723 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 339 bases
Position: chrBDQW01004516.1:103688-104026
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000033031	MMR_HSR1	PF01926.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000033594	-	339	-	ENSSDUP00000033031	112 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000023723's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000023723's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000023723	-	93	41.441	ENSSDUG00000013427	-	60	41.441
ENSSDUG00000023723	-	93	51.923	ENSSDUG00000005105	arf5	57	51.923
ENSSDUG00000023723	-	88	56.566	ENSSDUG00000013041	-	54	56.566
ENSSDUG00000023723	-	100	37.607	ENSSDUG00000012261	arl5a	64	37.607
ENSSDUG00000023723	-	93	34.615	ENSSDUG00000019629	-	72	36.842
ENSSDUG00000023723	-	93	38.462	ENSSDUG00000003943	arl3l2	55	38.462
ENSSDUG00000023723	-	79	38.636	ENSSDUG00000004762	-	56	36.538
ENSSDUG00000023723	-	88	56.566	ENSSDUG00000007524	arf3b	52	56.566
ENSSDUG00000023723	-	93	34.615	ENSSDUG00000020926	sar1b	80	35.644
ENSSDUG00000023723	-	92	41.748	ENSSDUG00000013898	arl1	57	41.748
ENSSDUG00000023723	-	89	50.000	ENSSDUG00000004422	arl11	58	50.000
ENSSDUG00000023723	-	88	54.545	ENSSDUG00000014675	-	54	54.545
ENSSDUG00000023723	-	86	48.515	ENSSDUG00000017586	-	50	48.515
ENSSDUG00000023723	-	93	34.615	ENSSDUG00000010773	sar1ab	66	36.842
ENSSDUG00000023723	-	88	36.697	ENSSDUG00000007121	arfrp1	52	36.697
ENSSDUG00000023723	-	94	33.043	ENSSDUG00000006652	ARL6	61	31.148
ENSSDUG00000023723	-	88	56.566	ENSSDUG00000017254	-	54	56.566
ENSSDUG00000023723	-	88	55.556	ENSSDUG00000017356	-	54	55.556
ENSSDUG00000023723	-	100	39.286	ENSSDUG00000022640	arl5c	60	39.286
ENSSDUG00000023723	-	87	49.000	ENSSDUG00000000586	arl4aa	50	49.000
ENSSDUG00000023723	-	83	45.161	ENSSDUG00000021397	arl2	53	44.444
ENSSDUG00000023723	-	100	37.607	ENSSDUG00000007515	ARL5B	64	37.607
ENSSDUG00000023723	-	92	36.893	ENSSDUG00000013976	arl3	55	36.893
ENSSDUG00000023723	-	86	52.525	ENSSDUG00000012868	arl4cb	52	52.525
ENSSDUG00000023723	-	88	30.000	ENSSDUG00000012529	arl8bb	53	30.000
ENSSDUG00000023723	-	88	56.566	ENSSDUG00000007780	arf2b	54	56.566
ENSSDUG00000023723	-	100	51.695	ENSSDUG00000020599	-	65	51.695

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000023723	-	97	53.913	ENSACIG00000013244	arl14	56	53.913	Amphilophus_citrinellus
ENSSDUG00000023723	-	100	82.143	ENSACLG00000015415	-	54	82.143	Astatotilapia_calliptera
ENSSDUG00000023723	-	97	55.357	ENSACLG00000026984	arl14	55	55.357	Astatotilapia_calliptera
ENSSDUG00000023723	-	100	80.357	ENSCSEG00000017926	-	55	80.357	Cynoglossus_semilaevis
ENSSDUG00000023723	-	100	54.386	ENSDARG00000063223	arl14	57	54.386	Danio_rerio
ENSSDUG00000023723	-	100	57.018	ENSFHEG00000018721	arl14	56	57.018	Fundulus_heteroclitus
ENSSDUG00000023723	-	93	51.887	ENSGMOG00000020214	arl14	63	51.887	Gadus_morhua
ENSSDUG00000023723	-	100	75.893	ENSGAFG00000012819	-	57	75.893	Gambusia_affinis
ENSSDUG00000023723	-	100	81.250	ENSGACG00000010096	-	60	83.654	Gasterosteus_aculeatus
ENSSDUG00000023723	-	100	58.036	ENSGACG00000013840	arl14	61	58.036	Gasterosteus_aculeatus
ENSSDUG00000023723	-	97	55.357	ENSHBUG00000001159	arl14	55	55.357	Haplochromis_burtoni
ENSSDUG00000023723	-	100	52.632	ENSHCOG00000009562	arl14	54	52.632	Hippocampus_comes
ENSSDUG00000023723	-	96	77.778	ENSKMAG00000020389	-	52	77.778	Kryptolebias_marmoratus
ENSSDUG00000023723	-	60	57.971	ENSKMAG00000010409	arl14	50	55.446	Kryptolebias_marmoratus
ENSSDUG00000023723	-	100	56.140	ENSLBEG00000021116	arl14	53	56.140	Labrus_bergylta
ENSSDUG00000023723	-	100	56.140	ENSMAMG00000011773	arl14	56	56.140	Mastacembelus_armatus
ENSSDUG00000023723	-	100	82.143	ENSMAMG00000012474	-	54	82.143	Mastacembelus_armatus
ENSSDUG00000023723	-	100	82.143	ENSMZEG00005000218	-	54	82.143	Maylandia_zebra
ENSSDUG00000023723	-	97	55.357	ENSMZEG00005025506	arl14	55	55.357	Maylandia_zebra
ENSSDUG00000023723	-	100	51.754	ENSORLG00000027330	arl14	61	51.754	Oryzias_latipes
ENSSDUG00000023723	-	100	51.754	ENSORLG00020014120	arl14	61	51.754	Oryzias_latipes_hni
ENSSDUG00000023723	-	100	51.754	ENSORLG00015014176	arl14	61	51.754	Oryzias_latipes_hsok
ENSSDUG00000023723	-	98	55.357	ENSOMEG00000016904	arl14	61	55.357	Oryzias_melastigma
ENSSDUG00000023723	-	91	55.769	ENSPFOG00000020069	arl14	54	54.717	Poecilia_formosa
ENSSDUG00000023723	-	100	75.000	ENSPFOG00000012216	-	53	75.000	Poecilia_formosa
ENSSDUG00000023723	-	93	54.717	ENSPLAG00000017362	arl14	61	54.717	Poecilia_latipinna
ENSSDUG00000023723	-	100	73.214	ENSPMEG00000008427	-	54	73.214	Poecilia_mexicana
ENSSDUG00000023723	-	91	57.692	ENSPREG00000001976	arl14	52	57.692	Poecilia_reticulata
ENSSDUG00000023723	-	100	75.893	ENSPREG00000001895	-	54	75.893	Poecilia_reticulata
ENSSDUG00000023723	-	100	82.143	ENSPNYG00000006844	-	58	82.143	Pundamilia_nyererei
ENSSDUG00000023723	-	96	87.037	ENSSMAG00000012843	-	52	87.037	Scophthalmus_maximus
ENSSDUG00000023723	-	100	94.643	ENSSLDG00000006512	-	54	94.643	Seriola_lalandi_dorsalis
ENSSDUG00000023723	-	90	54.369	ENSSPAG00000014539	arl14	51	54.369	Stegastes_partitus
ENSSDUG00000023723	-	100	81.250	ENSSPAG00000014422	-	54	81.250	Stegastes_partitus
ENSSDUG00000023723	-	100	56.140	ENSTNIG00000015242	-	59	56.140	Tetraodon_nigroviridis
ENSSDUG00000023723	-	100	77.679	ENSXMAG00000021386	-	54	77.679	Xiphophorus_maculatus