EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000023765 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 10573 bases
Position: chrBDQW01005129.1:73931-84503
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000033085	zf-C2H2	PF00096.26	3.5e-25	1	4
ENSSDUP00000033085	zf-C2H2	PF00096.26	3.5e-25	2	4
ENSSDUP00000033085	zf-C2H2	PF00096.26	3.5e-25	3	4
ENSSDUP00000033085	zf-C2H2	PF00096.26	3.5e-25	4	4
ENSSDUP00000033085	zf-met	PF12874.7	9.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000033649	-	657	-	ENSSDUP00000033085	218 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000023765's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000023765's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000023765	-	71	48.305	ENSSDUG00000009553	-	54	48.305
ENSSDUG00000023765	-	67	50.694	ENSSDUG00000015204	-	95	50.694
ENSSDUG00000023765	-	81	49.550	ENSSDUG00000006740	-	93	37.415
ENSSDUG00000023765	-	79	53.676	ENSSDUG00000002195	-	95	51.724
ENSSDUG00000023765	-	71	49.645	ENSSDUG00000000786	-	98	51.190
ENSSDUG00000023765	-	76	45.217	ENSSDUG00000008329	-	52	43.836
ENSSDUG00000023765	-	89	32.143	ENSSDUG00000013335	-	52	32.143
ENSSDUG00000023765	-	96	53.571	ENSSDUG00000008682	-	99	53.571
ENSSDUG00000023765	-	65	50.365	ENSSDUG00000020805	-	79	50.365
ENSSDUG00000023765	-	85	46.000	ENSSDUG00000014540	znf341	50	46.000
ENSSDUG00000023765	-	96	46.491	ENSSDUG00000000946	-	98	50.602
ENSSDUG00000023765	-	71	52.857	ENSSDUG00000015013	-	64	52.857
ENSSDUG00000023765	-	84	47.581	ENSSDUG00000016734	-	67	47.581
ENSSDUG00000023765	-	69	34.821	ENSSDUG00000010305	-	58	34.821
ENSSDUG00000023765	-	71	42.446	ENSSDUG00000003003	znf319b	77	42.446
ENSSDUG00000023765	-	71	42.949	ENSSDUG00000022412	znf648	58	42.949
ENSSDUG00000023765	-	97	47.887	ENSSDUG00000006463	-	96	47.887
ENSSDUG00000023765	-	71	46.429	ENSSDUG00000002488	-	63	46.429
ENSSDUG00000023765	-	73	47.059	ENSSDUG00000022914	-	50	52.899
ENSSDUG00000023765	-	96	53.333	ENSSDUG00000009577	-	70	53.333
ENSSDUG00000023765	-	67	53.333	ENSSDUG00000015182	-	60	53.333
ENSSDUG00000023765	-	96	50.505	ENSSDUG00000015622	-	72	50.505
ENSSDUG00000023765	-	68	47.761	ENSSDUG00000000695	-	74	49.219
ENSSDUG00000023765	-	86	41.844	ENSSDUG00000002174	-	67	41.844
ENSSDUG00000023765	-	89	52.500	ENSSDUG00000016450	-	58	43.571
ENSSDUG00000023765	-	75	46.154	ENSSDUG00000020397	prdm5	72	38.732
ENSSDUG00000023765	-	71	48.571	ENSSDUG00000000799	-	70	48.571
ENSSDUG00000023765	-	68	53.030	ENSSDUG00000006426	-	92	50.450
ENSSDUG00000023765	-	62	36.691	ENSSDUG00000001637	scrt2	51	35.583
ENSSDUG00000023765	-	66	34.752	ENSSDUG00000001918	znf366	50	34.752
ENSSDUG00000023765	-	66	44.531	ENSSDUG00000000889	-	75	44.531
ENSSDUG00000023765	-	66	51.049	ENSSDUG00000011244	-	73	51.049
ENSSDUG00000023765	-	69	51.852	ENSSDUG00000004867	-	96	51.765
ENSSDUG00000023765	-	71	37.931	ENSSDUG00000017250	-	57	37.931
ENSSDUG00000023765	-	82	43.796	ENSSDUG00000019932	ZNF319	89	43.796
ENSSDUG00000023765	-	67	48.182	ENSSDUG00000000705	-	63	48.182
ENSSDUG00000023765	-	67	34.932	ENSSDUG00000019933	snai1a	54	34.932
ENSSDUG00000023765	-	67	57.576	ENSSDUG00000015254	-	89	51.786
ENSSDUG00000023765	-	67	44.828	ENSSDUG00000011604	gfi1b	53	44.828
ENSSDUG00000023765	-	67	52.273	ENSSDUG00000009563	-	70	52.273
ENSSDUG00000023765	-	89	55.797	ENSSDUG00000004835	-	78	55.797
ENSSDUG00000023765	-	83	60.630	ENSSDUG00000023764	-	98	60.630
ENSSDUG00000023765	-	96	50.355	ENSSDUG00000007336	-	97	50.355
ENSSDUG00000023765	-	92	40.179	ENSSDUG00000002675	znf646	53	38.542
ENSSDUG00000023765	-	68	51.429	ENSSDUG00000015191	-	90	51.429
ENSSDUG00000023765	-	91	48.120	ENSSDUG00000013904	-	69	48.120
ENSSDUG00000023765	-	99	55.000	ENSSDUG00000015159	-	91	55.000
ENSSDUG00000023765	-	97	52.846	ENSSDUG00000009439	-	98	52.846
ENSSDUG00000023765	-	88	48.227	ENSSDUG00000005323	-	96	48.227
ENSSDUG00000023765	-	96	55.455	ENSSDUG00000009534	-	65	55.455
ENSSDUG00000023765	-	99	32.018	ENSSDUG00000007752	scrt1b	78	32.018
ENSSDUG00000023765	-	94	51.163	ENSSDUG00000005401	-	96	51.163
ENSSDUG00000023765	-	69	50.360	ENSSDUG00000020810	-	65	50.360
ENSSDUG00000023765	-	67	50.340	ENSSDUG00000004650	-	97	50.340
ENSSDUG00000023765	-	83	50.000	ENSSDUG00000008943	-	87	51.064
ENSSDUG00000023765	-	78	51.471	ENSSDUG00000006808	-	74	51.471
ENSSDUG00000023765	-	75	45.033	ENSSDUG00000004892	-	83	36.134
ENSSDUG00000023765	-	73	39.231	ENSSDUG00000018060	snai2	53	39.231
ENSSDUG00000023765	-	80	46.835	ENSSDUG00000011170	znf236	50	46.835
ENSSDUG00000023765	-	74	47.656	ENSSDUG00000020595	-	85	47.586
ENSSDUG00000023765	-	72	49.580	ENSSDUG00000020788	-	63	49.580
ENSSDUG00000023765	-	83	52.555	ENSSDUG00000009601	-	99	52.555
ENSSDUG00000023765	-	66	51.786	ENSSDUG00000009421	-	79	51.786
ENSSDUG00000023765	-	72	48.148	ENSSDUG00000004089	-	95	50.400
ENSSDUG00000023765	-	67	44.262	ENSSDUG00000012926	-	67	44.262
ENSSDUG00000023765	-	72	48.936	ENSSDUG00000001263	-	97	48.936

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000023765	-	91	50.704	ENSAPOG00000023008	-	69	50.704	Acanthochromis_polyacanthus
ENSSDUG00000023765	-	66	44.737	ENSAPOG00000004997	-	84	44.737	Acanthochromis_polyacanthus
ENSSDUG00000023765	-	71	52.147	ENSAPOG00000009709	-	67	55.629	Acanthochromis_polyacanthus
ENSSDUG00000023765	-	67	45.217	ENSACIG00000006228	-	60	45.217	Amphilophus_citrinellus
ENSSDUG00000023765	-	95	52.439	ENSACIG00000022738	-	98	54.464	Amphilophus_citrinellus
ENSSDUG00000023765	-	67	43.056	ENSACIG00000007096	-	82	43.056	Amphilophus_citrinellus
ENSSDUG00000023765	-	91	51.408	ENSAOCG00000016409	-	69	51.408	Amphiprion_ocellaris
ENSSDUG00000023765	-	91	49.541	ENSAPEG00000008746	-	69	50.704	Amphiprion_percula
ENSSDUG00000023765	-	70	44.828	ENSAPEG00000009553	-	52	44.828	Amphiprion_percula
ENSSDUG00000023765	-	95	47.328	ENSATEG00000022064	-	94	49.624	Anabas_testudineus
ENSSDUG00000023765	-	77	54.545	ENSATEG00000014684	-	92	50.943	Anabas_testudineus
ENSSDUG00000023765	-	67	47.482	ENSATEG00000021602	-	65	47.482	Anabas_testudineus
ENSSDUG00000023765	-	91	52.113	ENSATEG00000015238	-	69	52.113	Anabas_testudineus
ENSSDUG00000023765	-	68	52.113	ENSACLG00000015462	-	61	52.113	Astatotilapia_calliptera
ENSSDUG00000023765	-	76	46.087	ENSACLG00000014365	-	91	43.038	Astatotilapia_calliptera
ENSSDUG00000023765	-	79	47.273	ENSACLG00000005795	-	69	47.273	Astatotilapia_calliptera
ENSSDUG00000023765	-	67	47.586	ENSACLG00000019482	-	74	47.586	Astatotilapia_calliptera
ENSSDUG00000023765	-	80	47.101	ENSACLG00000011239	-	79	47.101	Astatotilapia_calliptera
ENSSDUG00000023765	-	66	35.099	ENSACLG00000013531	-	95	35.099	Astatotilapia_calliptera
ENSSDUG00000023765	-	71	43.382	ENSACLG00000019349	-	72	43.382	Astatotilapia_calliptera
ENSSDUG00000023765	-	66	46.809	ENSACLG00000020333	-	86	46.552	Astatotilapia_calliptera
ENSSDUG00000023765	-	67	43.966	ENSACLG00000022482	-	81	43.966	Astatotilapia_calliptera
ENSSDUG00000023765	-	66	49.180	ENSACLG00000018716	-	72	49.180	Astatotilapia_calliptera
ENSSDUG00000023765	-	66	46.099	ENSACLG00000008374	-	50	46.099	Astatotilapia_calliptera
ENSSDUG00000023765	-	77	47.619	ENSACLG00000001368	-	87	47.619	Astatotilapia_calliptera
ENSSDUG00000023765	-	66	46.809	ENSACLG00000006718	-	86	46.552	Astatotilapia_calliptera
ENSSDUG00000023765	-	66	45.238	ENSAMXG00000034934	-	78	45.238	Astyanax_mexicanus
ENSSDUG00000023765	-	86	48.413	ENSAMXG00000007973	-	95	48.413	Astyanax_mexicanus
ENSSDUG00000023765	-	63	43.103	ENSCSEG00000019599	-	62	43.103	Cynoglossus_semilaevis
ENSSDUG00000023765	-	67	42.241	ENSCSEG00000019848	-	53	42.241	Cynoglossus_semilaevis
ENSSDUG00000023765	-	77	50.000	ENSCVAG00000019097	-	69	50.000	Cyprinodon_variegatus
ENSSDUG00000023765	-	97	42.478	ENSCVAG00000020968	-	61	42.478	Cyprinodon_variegatus
ENSSDUG00000023765	-	65	49.180	ENSCVAG00000010887	-	50	49.180	Cyprinodon_variegatus
ENSSDUG00000023765	-	68	52.113	ENSELUG00000004677	-	61	52.113	Esox_lucius
ENSSDUG00000023765	-	71	42.361	ENSFHEG00000013228	-	51	42.361	Fundulus_heteroclitus
ENSSDUG00000023765	-	96	49.296	ENSFHEG00000003460	-	71	49.296	Fundulus_heteroclitus
ENSSDUG00000023765	-	72	52.817	ENSGMOG00000009187	ZNF626	77	52.817	Gadus_morhua
ENSSDUG00000023765	-	76	57.143	ENSGMOG00000017518	-	65	57.143	Gadus_morhua
ENSSDUG00000023765	-	78	50.000	ENSGAFG00000001481	-	80	50.394	Gambusia_affinis
ENSSDUG00000023765	-	65	41.593	ENSGAFG00000007532	-	70	41.593	Gambusia_affinis
ENSSDUG00000023765	-	82	45.926	ENSGAGG00000015232	-	64	45.926	Gopherus_agassizii
ENSSDUG00000023765	-	96	52.113	ENSHBUG00000019377	-	74	52.113	Haplochromis_burtoni
ENSSDUG00000023765	-	74	41.593	ENSHBUG00000009274	-	92	41.593	Haplochromis_burtoni
ENSSDUG00000023765	-	69	47.619	ENSHBUG00000020527	-	90	47.619	Haplochromis_burtoni
ENSSDUG00000023765	-	66	48.551	ENSHBUG00000011944	-	79	45.455	Haplochromis_burtoni
ENSSDUG00000023765	-	69	43.023	ENSHBUG00000020544	-	89	43.023	Haplochromis_burtoni
ENSSDUG00000023765	-	66	46.099	ENSHBUG00000017924	-	50	46.099	Haplochromis_burtoni
ENSSDUG00000023765	-	79	47.273	ENSHBUG00000013065	-	62	47.273	Haplochromis_burtoni
ENSSDUG00000023765	-	66	46.154	ENSHBUG00000017251	-	98	46.154	Haplochromis_burtoni
ENSSDUG00000023765	-	67	49.123	ENSIPUG00000022266	ZNF135	61	49.123	Ictalurus_punctatus
ENSSDUG00000023765	-	66	48.855	ENSKMAG00000000802	-	73	48.855	Kryptolebias_marmoratus
ENSSDUG00000023765	-	86	52.857	ENSKMAG00000017903	-	60	52.857	Kryptolebias_marmoratus
ENSSDUG00000023765	-	84	50.000	ENSKMAG00000015304	-	68	50.000	Kryptolebias_marmoratus
ENSSDUG00000023765	-	67	47.748	ENSLBEG00000008850	-	51	47.748	Labrus_bergylta
ENSSDUG00000023765	-	64	52.577	ENSLBEG00000008909	-	76	52.577	Labrus_bergylta
ENSSDUG00000023765	-	93	55.844	ENSLBEG00000026457	-	99	48.649	Labrus_bergylta
ENSSDUG00000023765	-	91	48.252	ENSLOCG00000017422	-	84	48.252	Lepisosteus_oculatus
ENSSDUG00000023765	-	67	46.667	ENSMAMG00000015434	-	69	46.667	Mastacembelus_armatus
ENSSDUG00000023765	-	91	50.345	ENSMAMG00000010902	-	67	50.345	Mastacembelus_armatus
ENSSDUG00000023765	-	74	48.214	ENSMAMG00000002083	-	93	41.477	Mastacembelus_armatus
ENSSDUG00000023765	-	67	40.698	ENSMZEG00005003951	-	77	40.698	Maylandia_zebra
ENSSDUG00000023765	-	78	47.273	ENSMZEG00005011812	-	62	47.273	Maylandia_zebra
ENSSDUG00000023765	-	85	43.704	ENSMZEG00005012676	-	89	43.704	Maylandia_zebra
ENSSDUG00000023765	-	79	45.714	ENSMZEG00005022884	-	94	45.714	Maylandia_zebra
ENSSDUG00000023765	-	70	53.061	ENSMZEG00005023565	-	68	50.000	Maylandia_zebra
ENSSDUG00000023765	-	78	47.917	ENSMZEG00005020568	-	80	47.917	Maylandia_zebra
ENSSDUG00000023765	-	72	45.217	ENSMZEG00005027551	-	89	46.154	Maylandia_zebra
ENSSDUG00000023765	-	67	46.154	ENSMZEG00005028563	-	85	46.154	Maylandia_zebra
ENSSDUG00000023765	-	66	47.826	ENSMZEG00005025965	-	79	46.552	Maylandia_zebra
ENSSDUG00000023765	-	66	46.099	ENSMZEG00005011431	-	84	44.444	Maylandia_zebra
ENSSDUG00000023765	-	68	52.113	ENSMZEG00005018502	-	61	52.113	Maylandia_zebra
ENSSDUG00000023765	-	67	46.341	ENSMZEG00005025125	-	97	46.341	Maylandia_zebra
ENSSDUG00000023765	-	71	46.000	ENSMZEG00005025006	-	88	46.000	Maylandia_zebra
ENSSDUG00000023765	-	67	45.600	ENSMZEG00005025725	-	96	45.600	Maylandia_zebra
ENSSDUG00000023765	-	67	49.541	ENSMMOG00000009252	-	64	49.541	Mola_mola
ENSSDUG00000023765	-	97	42.754	ENSMMOG00000005437	-	68	42.754	Mola_mola
ENSSDUG00000023765	-	68	94.048	ENSMALG00000010959	-	90	76.101	Monopterus_albus
ENSSDUG00000023765	-	70	44.706	ENSMALG00000002956	-	95	44.706	Monopterus_albus
ENSSDUG00000023765	-	67	49.655	ENSMALG00000011756	-	69	49.655	Monopterus_albus
ENSSDUG00000023765	-	67	47.552	ENSMALG00000005696	-	53	47.552	Monopterus_albus
ENSSDUG00000023765	-	67	45.690	ENSNBRG00000019004	-	82	44.853	Neolamprologus_brichardi
ENSSDUG00000023765	-	85	50.538	ENSNBRG00000016639	-	52	50.538	Neolamprologus_brichardi
ENSSDUG00000023765	-	66	47.273	ENSNBRG00000004792	-	52	46.099	Neolamprologus_brichardi
ENSSDUG00000023765	-	68	52.113	ENSNBRG00000024179	-	61	52.113	Neolamprologus_brichardi
ENSSDUG00000023765	-	69	47.674	ENSNBRG00000004723	-	87	47.674	Neolamprologus_brichardi
ENSSDUG00000023765	-	74	53.571	ENSONIG00000014012	-	92	53.571	Oreochromis_niloticus
ENSSDUG00000023765	-	70	49.324	ENSONIG00000012374	-	99	49.324	Oreochromis_niloticus
ENSSDUG00000023765	-	84	50.400	ENSONIG00000020667	-	97	50.400	Oreochromis_niloticus
ENSSDUG00000023765	-	66	51.471	ENSONIG00000008297	-	93	51.471	Oreochromis_niloticus
ENSSDUG00000023765	-	66	46.789	ENSONIG00000001986	-	96	46.789	Oreochromis_niloticus
ENSSDUG00000023765	-	70	45.614	ENSONIG00000015024	-	82	45.614	Oreochromis_niloticus
ENSSDUG00000023765	-	66	53.731	ENSONIG00000019139	-	98	53.731	Oreochromis_niloticus
ENSSDUG00000023765	-	68	50.350	ENSOMEG00000015179	-	65	50.350	Oryzias_melastigma
ENSSDUG00000023765	-	78	46.875	ENSPKIG00000015951	-	70	46.875	Paramormyrops_kingsleyae
ENSSDUG00000023765	-	66	43.243	ENSPMGG00000020606	-	93	43.243	Periophthalmus_magnuspinnatus
ENSSDUG00000023765	-	78	48.739	ENSPMGG00000008518	-	95	48.739	Periophthalmus_magnuspinnatus
ENSSDUG00000023765	-	77	49.296	ENSPFOG00000000667	-	67	49.296	Poecilia_formosa
ENSSDUG00000023765	-	75	49.306	ENSPFOG00000018771	-	62	49.306	Poecilia_formosa
ENSSDUG00000023765	-	79	49.296	ENSPLAG00000013745	-	85	50.667	Poecilia_latipinna
ENSSDUG00000023765	-	70	43.966	ENSPLAG00000005106	-	70	43.966	Poecilia_latipinna
ENSSDUG00000023765	-	67	50.735	ENSPMEG00000022651	-	61	50.735	Poecilia_mexicana
ENSSDUG00000023765	-	67	43.902	ENSPMEG00000020864	-	85	43.902	Poecilia_mexicana
ENSSDUG00000023765	-	95	45.455	ENSPNYG00000019325	-	90	45.455	Pundamilia_nyererei
ENSSDUG00000023765	-	71	46.324	ENSPNYG00000003834	-	87	46.324	Pundamilia_nyererei
ENSSDUG00000023765	-	67	47.518	ENSPNYG00000011024	-	57	47.518	Pundamilia_nyererei
ENSSDUG00000023765	-	73	44.667	ENSPNYG00000020737	-	93	44.667	Pundamilia_nyererei
ENSSDUG00000023765	-	66	46.099	ENSPNYG00000016157	-	50	46.099	Pundamilia_nyererei
ENSSDUG00000023765	-	71	45.833	ENSPNAG00000011660	-	53	45.833	Pygocentrus_nattereri
ENSSDUG00000023765	-	67	49.550	ENSPNAG00000010850	-	77	49.550	Pygocentrus_nattereri
ENSSDUG00000023765	-	67	56.140	ENSPNAG00000025882	-	61	56.140	Pygocentrus_nattereri
ENSSDUG00000023765	-	73	53.741	ENSSFOG00015006083	-	59	53.741	Scleropages_formosus
ENSSDUG00000023765	-	70	87.500	ENSSMAG00000013663	-	97	82.468	Scophthalmus_maximus
ENSSDUG00000023765	-	66	45.783	ENSSMAG00000004429	-	82	45.783	Scophthalmus_maximus
ENSSDUG00000023765	-	98	52.857	ENSSMAG00000013828	-	73	52.857	Scophthalmus_maximus
ENSSDUG00000023765	-	95	48.551	ENSSMAG00000006155	-	63	48.551	Scophthalmus_maximus
ENSSDUG00000023765	-	91	52.857	ENSSLDG00000021278	-	69	52.857	Seriola_lalandi_dorsalis
ENSSDUG00000023765	-	67	47.368	ENSSPAG00000007691	-	75	47.368	Stegastes_partitus
ENSSDUG00000023765	-	67	58.065	ENSSPAG00000008950	-	68	53.012	Stegastes_partitus
ENSSDUG00000023765	-	91	52.113	ENSSPAG00000007403	-	92	52.113	Stegastes_partitus
ENSSDUG00000023765	-	66	53.153	ENSTGUG00000018254	-	99	53.153	Taeniopygia_guttata
ENSSDUG00000023765	-	65	47.518	ENSTGUG00000018439	-	100	47.518	Taeniopygia_guttata
ENSSDUG00000023765	-	66	48.507	ENSTGUG00000015549	-	100	48.507	Taeniopygia_guttata
ENSSDUG00000023765	-	91	45.882	ENSTRUG00000023354	-	57	45.882	Takifugu_rubripes
ENSSDUG00000023765	-	67	49.074	ENSTRUG00000023491	-	57	49.074	Takifugu_rubripes
ENSSDUG00000023765	-	72	49.296	ENSTNIG00000002344	-	100	49.296	Tetraodon_nigroviridis
ENSSDUG00000023765	-	71	45.455	ENSXCOG00000013306	-	63	45.455	Xiphophorus_couchianus
ENSSDUG00000023765	-	81	47.959	ENSXCOG00000011372	-	89	47.959	Xiphophorus_couchianus
ENSSDUG00000023765	-	60	48.438	ENSXCOG00000020769	-	94	48.438	Xiphophorus_couchianus
ENSSDUG00000023765	-	73	49.324	ENSXMAG00000024973	-	67	49.324	Xiphophorus_maculatus
ENSSDUG00000023765	-	75	51.136	ENSXMAG00000022894	-	53	51.136	Xiphophorus_maculatus
ENSSDUG00000023765	-	77	41.975	ENSXMAG00000025174	-	50	41.975	Xiphophorus_maculatus