EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015000041 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC108928325
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 3027 bases
Position: chrKV410777.1:171030-174056
Accession: 108928325
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015000017	RVT_1	PF00078.27	7.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015000041	-	3027	XM_018742249	ENSSFOP00015000017	968 (aa)	XP_018597765	-

Gene Model

Click here to download ENSSFOG00015000041's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015000041's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015000041	-	93	100.000	ENSSFOG00015009840	-	86	100.000
ENSSFOG00015000041	-	94	99.670	ENSSFOG00015018491	-	99	99.670

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015000041	-	78	40.921	ENSACLG00000020851	-	99	40.921	Astatotilapia_calliptera
ENSSFOG00015000041	-	96	41.295	ENSAMXG00000030324	-	87	41.295	Astyanax_mexicanus
ENSSFOG00015000041	-	97	44.030	ENSAMXG00000039541	-	82	44.030	Astyanax_mexicanus
ENSSFOG00015000041	-	99	66.144	ENSAMXG00000034228	-	81	66.144	Astyanax_mexicanus
ENSSFOG00015000041	-	96	54.642	ENSAMXG00000035203	-	83	54.642	Astyanax_mexicanus
ENSSFOG00015000041	-	96	40.426	ENSMZEG00005018493	-	86	40.426	Maylandia_zebra
ENSSFOG00015000041	-	71	58.153	ENSORLG00015002388	-	87	58.153	Oryzias_latipes_hsok
ENSSFOG00015000041	-	86	56.465	ENSOMEG00000023989	-	91	56.465	Oryzias_melastigma
ENSSFOG00015000041	-	97	43.631	ENSSLDG00000012549	-	90	43.723	Seriola_lalandi_dorsalis
ENSSFOG00015000041	-	96	42.444	ENSTNIG00000000569	-	83	42.444	Tetraodon_nigroviridis