EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015000132 (Gene tree)
Gene ID: 108933782
Gene Symbol: arid4b
Alias: BCAA|BRCAA1|RBP1L1|SAP180
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 68464 bases
Position: chrKV411038.1:3022538-3091001
Accession: 108933782
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015000091	Tudor-knot	PF11717.8	1.1e-10	1	1
ENSSFOP00015000105	Tudor-knot	PF11717.8	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015000129	-	6116	XM_018751096	ENSSFOP00015000105	1279 (aa)	XP_018606612	A0A1W4ZSF6
ENSSFOT00015000115	-	6452	-	ENSSFOP00015000091	1279 (aa)	-	A0A1W4ZSF6

Gene Model

Click here to download ENSSFOG00015000132's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015000132's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015000132	arid4b	75	49.696	ENSSFOG00015008923	tomm20a	100	48.335

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015000132	arid4b	55	57.584	ENSG00000054267	ARID4B	94	68.352	Homo_sapiens
ENSSFOG00015000132	arid4b	99	62.653	ENSAPOG00000010823	tomm20a	100	61.754	Acanthochromis_polyacanthus
ENSSFOG00015000132	arid4b	90	79.907	ENSACIG00000006313	tomm20a	99	79.907	Amphilophus_citrinellus
ENSSFOG00015000132	arid4b	99	62.385	ENSAOCG00000003330	tomm20a	100	61.492	Amphiprion_ocellaris
ENSSFOG00015000132	arid4b	99	62.375	ENSAPEG00000024018	tomm20a	100	61.480	Amphiprion_percula
ENSSFOG00015000132	arid4b	99	61.521	ENSATEG00000014930	tomm20a	100	61.302	Anabas_testudineus
ENSSFOG00015000132	arid4b	55	57.450	ENSANAG00000038088	ARID4B	54	57.580	Aotus_nancymaae
ENSSFOG00015000132	arid4b	90	72.300	ENSACLG00000023521	tomm20a	99	70.657	Astatotilapia_calliptera
ENSSFOG00015000132	arid4b	95	54.078	ENSAMXG00000003657	tomm20a	99	54.610	Astyanax_mexicanus
ENSSFOG00015000132	arid4b	54	58.503	ENSBTAG00000000222	ARID4B	54	58.020	Bos_taurus
ENSSFOG00015000132	arid4b	55	57.781	ENSCJAG00000018055	ARID4B	100	49.889	Callithrix_jacchus
ENSSFOG00015000132	arid4b	54	58.887	ENSCAFG00000011439	ARID4B	54	57.858	Canis_familiaris
ENSSFOG00015000132	arid4b	54	58.299	ENSCAFG00020027130	ARID4B	53	57.243	Canis_lupus_dingo
ENSSFOG00015000132	arid4b	54	55.405	ENSCHIG00000020742	ARID4B	53	54.659	Capra_hircus
ENSSFOG00015000132	arid4b	55	57.450	ENSCCAG00000021520	ARID4B	54	57.580	Cebus_capucinus
ENSSFOG00015000132	arid4b	55	57.275	ENSCATG00000042166	ARID4B	54	57.858	Cercocebus_atys
ENSSFOG00015000132	arid4b	55	57.507	ENSCSAG00000010069	ARID4B	54	57.719	Chlorocebus_sabaeus
ENSSFOG00015000132	arid4b	51	59.593	ENSCGRG00001014397	Arid4b	54	58.252	Cricetulus_griseus_chok1gshd
ENSSFOG00015000132	arid4b	51	59.562	ENSCGRG00000004910	Arid4b	54	58.217	Cricetulus_griseus_crigri
ENSSFOG00015000132	arid4b	99	58.837	ENSCSEG00000012928	tomm20a	100	58.652	Cynoglossus_semilaevis
ENSSFOG00015000132	arid4b	95	59.571	ENSCVAG00000003244	tomm20a	100	60.152	Cyprinodon_variegatus
ENSSFOG00015000132	arid4b	100	59.545	ENSDARG00000090656	tomm20a	100	58.757	Danio_rerio
ENSSFOG00015000132	arid4b	55	58.543	ENSDORG00000006422	Arid4b	100	49.075	Dipodomys_ordii
ENSSFOG00015000132	arid4b	53	59.828	ENSEASG00005000677	ARID4B	53	60.029	Equus_asinus_asinus
ENSSFOG00015000132	arid4b	53	58.807	ENSECAG00000017836	ARID4B	53	57.644	Equus_caballus
ENSSFOG00015000132	arid4b	50	85.366	ENSEEUG00000005378	ARID4B	50	85.366	Erinaceus_europaeus
ENSSFOG00015000132	arid4b	65	47.006	ENSELUG00000018441	tomm20a	90	45.205	Esox_lucius
ENSSFOG00015000132	arid4b	54	58.231	ENSFCAG00000030096	ARID4B	54	57.682	Felis_catus
ENSSFOG00015000132	arid4b	99	61.221	ENSFHEG00000003798	tomm20a	100	60.300	Fundulus_heteroclitus
ENSSFOG00015000132	arid4b	91	61.328	ENSGMOG00000018747	tomm20a	92	62.044	Gadus_morhua
ENSSFOG00015000132	arid4b	99	59.617	ENSGACG00000004298	tomm20a	100	59.201	Gasterosteus_aculeatus
ENSSFOG00015000132	arid4b	55	57.796	ENSGGOG00000022080	ARID4B	54	58.020	Gorilla_gorilla
ENSSFOG00015000132	arid4b	99	61.879	ENSHBUG00000020369	tomm20a	100	61.567	Haplochromis_burtoni
ENSSFOG00015000132	arid4b	54	58.379	ENSHGLG00000012546	ARID4B	54	58.298	Heterocephalus_glaber_female
ENSSFOG00015000132	arid4b	54	58.379	ENSHGLG00100015436	ARID4B	54	58.298	Heterocephalus_glaber_male
ENSSFOG00015000132	arid4b	88	78.744	ENSHCOG00000010376	tomm20a	95	78.019	Hippocampus_comes
ENSSFOG00015000132	arid4b	51	60.619	ENSJJAG00000021368	Arid4b	54	57.836	Jaculus_jaculus
ENSSFOG00015000132	arid4b	89	60.488	ENSKMAG00000010987	tomm20a	98	80.992	Kryptolebias_marmoratus
ENSSFOG00015000132	arid4b	54	58.345	ENSLAFG00000014295	ARID4B	54	58.298	Loxodonta_africana
ENSSFOG00015000132	arid4b	55	57.507	ENSMFAG00000044016	ARID4B	54	57.719	Macaca_fascicularis
ENSSFOG00015000132	arid4b	55	57.507	ENSMMUG00000007141	ARID4B	54	57.719	Macaca_mulatta
ENSSFOG00015000132	arid4b	54	57.510	ENSMLEG00000033583	ARID4B	54	57.725	Mandrillus_leucophaeus
ENSSFOG00015000132	arid4b	94	59.533	ENSMAMG00000017134	tomm20a	99	59.010	Mastacembelus_armatus
ENSSFOG00015000132	arid4b	99	62.385	ENSMZEG00005009879	tomm20a	100	61.643	Maylandia_zebra
ENSSFOG00015000132	arid4b	100	50.110	ENSMICG00000016358	ARID4B	100	50.147	Microcebus_murinus
ENSSFOG00015000132	arid4b	90	77.494	ENSMMOG00000000561	tomm20a	100	74.569	Mola_mola
ENSSFOG00015000132	arid4b	100	49.599	ENSMODG00000008417	ARID4B	58	56.371	Monodelphis_domestica
ENSSFOG00015000132	arid4b	99	62.000	ENSMALG00000005205	tomm20a	100	60.909	Monopterus_albus
ENSSFOG00015000132	arid4b	55	57.162	MGP_CAROLIEiJ_G0018236	Arid4b	54	58.391	Mus_caroli
ENSSFOG00015000132	arid4b	55	57.713	ENSMUSG00000039219	Arid4b	54	58.611	Mus_musculus
ENSSFOG00015000132	arid4b	51	59.275	MGP_PahariEiJ_G0019286	Arid4b	54	58.554	Mus_pahari
ENSSFOG00015000132	arid4b	100	49.673	MGP_SPRETEiJ_G0019094	Arid4b	100	50.110	Mus_spretus
ENSSFOG00015000132	arid4b	54	57.938	ENSMPUG00000002906	ARID4B	54	57.682	Mustela_putorius_furo
ENSSFOG00015000132	arid4b	54	58.276	ENSNGAG00000014629	Arid4b	54	57.858	Nannospalax_galili
ENSSFOG00015000132	arid4b	90	77.389	ENSNBRG00000019684	tomm20a	99	79.254	Neolamprologus_brichardi
ENSSFOG00015000132	arid4b	55	57.775	ENSNLEG00000002665	ARID4B	54	57.997	Nomascus_leucogenys
ENSSFOG00015000132	arid4b	54	58.356	ENSODEG00000005373	ARID4B	54	58.496	Octodon_degus
ENSSFOG00015000132	arid4b	55	57.620	ENSOCUG00000006605	ARID4B	99	49.631	Oryctolagus_cuniculus
ENSSFOG00015000132	arid4b	100	61.048	ENSORLG00000012510	tomm20a	100	59.153	Oryzias_latipes
ENSSFOG00015000132	arid4b	92	76.978	ENSORLG00020013988	tomm20a	100	79.616	Oryzias_latipes_hni
ENSSFOG00015000132	arid4b	92	77.590	ENSORLG00015022835	tomm20a	100	79.759	Oryzias_latipes_hsok
ENSSFOG00015000132	arid4b	100	60.942	ENSOMEG00000000521	tomm20a	100	59.358	Oryzias_melastigma
ENSSFOG00015000132	arid4b	54	58.579	ENSOARG00000003481	ARID4B	53	57.793	Ovis_aries
ENSSFOG00015000132	arid4b	55	57.718	ENSPPAG00000031651	ARID4B	54	57.719	Pan_paniscus
ENSSFOG00015000132	arid4b	54	58.424	ENSPPRG00000013739	ARID4B	54	57.402	Panthera_pardus
ENSSFOG00015000132	arid4b	54	58.345	ENSPTIG00000012520	ARID4B	55	57.542	Panthera_tigris_altaica
ENSSFOG00015000132	arid4b	55	57.718	ENSPTRG00000002129	ARID4B	54	57.939	Pan_troglodytes
ENSSFOG00015000132	arid4b	55	56.258	ENSPANG00000013611	ARID4B	54	56.983	Papio_anubis
ENSSFOG00015000132	arid4b	57	57.030	ENSPCIG00000029756	ARID4B	57	56.601	Phascolarctos_cinereus
ENSSFOG00015000132	arid4b	99	60.793	ENSPFOG00000019430	tomm20a	100	60.883	Poecilia_formosa
ENSSFOG00015000132	arid4b	99	60.793	ENSPLAG00000010554	tomm20a	100	60.720	Poecilia_latipinna
ENSSFOG00015000132	arid4b	99	59.417	ENSPMEG00000003093	tomm20a	100	57.991	Poecilia_mexicana
ENSSFOG00015000132	arid4b	99	60.627	ENSPREG00000007996	tomm20a	100	59.880	Poecilia_reticulata
ENSSFOG00015000132	arid4b	55	57.584	ENSPPYG00000000098	ARID4B	54	57.939	Pongo_abelii
ENSSFOG00015000132	arid4b	93	53.430	ENSPVAG00000015159	ARID4B	93	53.237	Pteropus_vampyrus
ENSSFOG00015000132	arid4b	99	58.456	ENSPNYG00000013988	tomm20a	100	58.976	Pundamilia_nyererei
ENSSFOG00015000132	arid4b	100	60.784	ENSPNAG00000000523	tomm20a	93	60.135	Pygocentrus_nattereri
ENSSFOG00015000132	arid4b	55	57.507	ENSRROG00000045203	ARID4B	54	57.719	Rhinopithecus_roxellana
ENSSFOG00015000132	arid4b	57	55.654	ENSSHAG00000015214	ARID4B	100	50.256	Sarcophilus_harrisii
ENSSFOG00015000132	arid4b	99	59.217	ENSSMAG00000010430	tomm20a	100	59.867	Scophthalmus_maximus
ENSSFOG00015000132	arid4b	99	62.691	ENSSDUG00000003019	tomm20a	100	61.696	Seriola_dumerili
ENSSFOG00015000132	arid4b	99	62.021	ENSSPAG00000007358	tomm20a	100	60.939	Stegastes_partitus
ENSSFOG00015000132	arid4b	55	58.146	ENSSSCG00000010156	ARID4B	61	58.172	Sus_scrofa
ENSSFOG00015000132	arid4b	57	54.628	ENSTRUG00000002893	tomm20a	85	54.453	Takifugu_rubripes
ENSSFOG00015000132	arid4b	69	66.262	ENSTBEG00000003961	ARID4B	66	70.297	Tupaia_belangeri
ENSSFOG00015000132	arid4b	55	57.143	ENSTTRG00000002228	ARID4B	54	57.322	Tursiops_truncatus
ENSSFOG00015000132	arid4b	66	57.971	ENSVPAG00000006841	ARID4B	66	58.407	Vicugna_pacos
ENSSFOG00015000132	arid4b	53	56.449	ENSVVUG00000008154	ARID4B	53	55.413	Vulpes_vulpes
ENSSFOG00015000132	arid4b	100	48.561	ENSXETG00000024651	arid4b	51	58.485	Xenopus_tropicalis
ENSSFOG00015000132	arid4b	99	61.239	ENSXMAG00000006538	tomm20a	100	60.781	Xiphophorus_maculatus