EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSFOG00015000248 (Gene tree)
Gene ID
108925744
Gene Symbol
cnot3
Alias
fb73b06|fc17h07|wu:fb73b06|wu:fc17h07|zgc:92813
Full Name
CCR4-NOT transcription complex subunit 3
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Plus strand
Length
11770 bases
Position
chrKV410779.1:1516303-1528072
Accession
108925744
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015000275Not3PF04065.159.4e-9611
ENSSFOP00015000294Not3PF04065.159.4e-9611
ENSSFOP00015000257Not3PF04065.151e-9511
ENSSFOP00015000265Not3PF04065.151e-9511
ENSSFOP00015000275NOT2_3_5PF04153.186.5e-4011
ENSSFOP00015000265NOT2_3_5PF04153.187.1e-4011
ENSSFOP00015000257NOT2_3_5PF04153.182.3e-3911
ENSSFOP00015000294NOT2_3_5PF04153.185.5e-2811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015000284-3149-ENSSFOP00015000257927 (aa)--
ENSSFOT00015000292-6202XM_018737963ENSSFOP00015000265930 (aa)XP_018593479A0A1W4YPI8
ENSSFOT00015000321-2679-ENSSFOP00015000294892 (aa)--
ENSSFOT00015000302-6088XM_018737970ENSSFOP00015000275892 (aa)XP_018593486A0A1W4YYX4
Gene Model
Click here to download ENSSFOG00015000248's gene model file
Pathways
Pathway IDPathway NameSource
sfm03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015000248's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSFOG00015000248cnot310075.109ENSSFOG00015019203-10073.268
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015000248cnot36990.032ENSG00000088038CNOT310095.361Homo_sapiens
ENSSFOG00015000248cnot35593.502ENSAPOG00000015002cnot3b10092.166Acanthochromis_polyacanthus
ENSSFOG00015000248cnot35874.312ENSAPOG00000015499CNOT39282.918Acanthochromis_polyacanthus
ENSSFOG00015000248cnot37390.354ENSAMEG00000004528CNOT38591.803Ailuropoda_melanoleuca
ENSSFOG00015000248cnot36793.750ENSACIG00000003652cnot3b9893.750Amphilophus_citrinellus
ENSSFOG00015000248cnot38492.857ENSACIG00000006635cnot3a9694.444Amphilophus_citrinellus
ENSSFOG00015000248cnot39764.939ENSAOCG00000018385-9679.904Amphiprion_ocellaris
ENSSFOG00015000248cnot35158.848ENSAOCG00000023769cnot3a9968.675Amphiprion_ocellaris
ENSSFOG00015000248cnot35068.627ENSAPEG00000006624cnot3a10071.164Amphiprion_percula
ENSSFOG00015000248cnot39768.066ENSAPEG00000002640cnot3b9694.907Amphiprion_percula
ENSSFOG00015000248cnot310069.707ENSATEG00000022737cnot3a10069.989Anabas_testudineus
ENSSFOG00015000248cnot310071.368ENSATEG00000015777cnot3b10071.686Anabas_testudineus
ENSSFOG00015000248cnot38091.558ENSACAG00000016085CNOT310091.803Anolis_carolinensis
ENSSFOG00015000248cnot37190.032ENSANAG00000025756CNOT38591.475Aotus_nancymaae
ENSSFOG00015000248cnot310071.567ENSACLG00000016702cnot3b10071.123Astatotilapia_calliptera
ENSSFOG00015000248cnot310069.770ENSACLG00000021136cnot3a10070.378Astatotilapia_calliptera
ENSSFOG00015000248cnot310070.860ENSAMXG00000009447cnot3b9594.595Astyanax_mexicanus
ENSSFOG00015000248cnot310069.222ENSAMXG00000012359cnot3a10070.086Astyanax_mexicanus
ENSSFOG00015000248cnot37190.354ENSBTAG00000014900CNOT39591.475Bos_taurus
ENSSFOG00015000248cnot37190.032ENSCJAG00000001094CNOT38591.475Callithrix_jacchus
ENSSFOG00015000248cnot37990.032ENSCAFG00000002699CNOT38591.475Canis_familiaris
ENSSFOG00015000248cnot37990.032ENSCAFG00020018359CNOT38591.475Canis_lupus_dingo
ENSSFOG00015000248cnot37190.032ENSTSYG00000008058CNOT38591.475Carlito_syrichta
ENSSFOG00015000248cnot38090.354ENSCAPG00000009533CNOT38591.475Cavia_aperea
ENSSFOG00015000248cnot38090.354ENSCPOG00000020741CNOT38591.475Cavia_porcellus
ENSSFOG00015000248cnot37190.032ENSCCAG00000036290CNOT38591.475Cebus_capucinus
ENSSFOG00015000248cnot37990.032ENSCATG00000030324CNOT38591.475Cercocebus_atys
ENSSFOG00015000248cnot37690.354ENSCLAG00000003302CNOT310086.585Chinchilla_lanigera
ENSSFOG00015000248cnot36990.032ENSCSAG00000001900CNOT39091.475Chlorocebus_sabaeus
ENSSFOG00015000248cnot37191.558ENSCPBG00000011655CNOT38892.131Chrysemys_picta_bellii
ENSSFOG00015000248cnot36781.707ENSCING00000000293-5981.707Ciona_intestinalis
ENSSFOG00015000248cnot36990.032ENSCANG00000013408CNOT39091.475Colobus_angolensis_palliatus
ENSSFOG00015000248cnot38090.354ENSCGRG00001000855Cnot38591.803Cricetulus_griseus_chok1gshd
ENSSFOG00015000248cnot310067.880ENSCSEG00000003574cnot3a10069.668Cynoglossus_semilaevis
ENSSFOG00015000248cnot38982.949ENSCSEG00000016892cnot3b9782.949Cynoglossus_semilaevis
ENSSFOG00015000248cnot310069.264ENSCVAG00000022122cnot3b10070.229Cyprinodon_variegatus
ENSSFOG00015000248cnot310069.121ENSCVAG00000008168cnot3a10067.275Cyprinodon_variegatus
ENSSFOG00015000248cnot310072.647ENSDARG00000019842cnot3b10070.939Danio_rerio
ENSSFOG00015000248cnot310069.273ENSDARG00000007135cnot3a10069.674Danio_rerio
ENSSFOG00015000248cnot36989.711ENSDNOG00000045972CNOT38591.148Dasypus_novemcinctus
ENSSFOG00015000248cnot37190.032ENSDORG00000008021Cnot310081.609Dipodomys_ordii
ENSSFOG00015000248cnot35066.667FBgn0033029Not35066.667Drosophila_melanogaster
ENSSFOG00015000248cnot351100.000ENSETEG00000006305CNOT360100.000Echinops_telfairi
ENSSFOG00015000248cnot36990.032ENSEASG00005021591CNOT38491.475Equus_asinus_asinus
ENSSFOG00015000248cnot36990.032ENSECAG00000023181CNOT38491.475Equus_caballus
ENSSFOG00015000248cnot310068.382ENSELUG00000014743cnot3a10068.376Esox_lucius
ENSSFOG00015000248cnot310070.607ENSELUG00000000953cnot3b10070.620Esox_lucius
ENSSFOG00015000248cnot38381.356ENSFCAG00000014042CNOT39091.475Felis_catus
ENSSFOG00015000248cnot310069.383ENSFHEG00000023166cnot3a10085.556Fundulus_heteroclitus
ENSSFOG00015000248cnot310070.194ENSFHEG00000001696cnot3b10070.043Fundulus_heteroclitus
ENSSFOG00015000248cnot39465.814ENSGMOG00000005365cnot3a9866.014Gadus_morhua
ENSSFOG00015000248cnot38982.432ENSGAFG00000003459cnot3b10069.783Gambusia_affinis
ENSSFOG00015000248cnot35255.010ENSGACG00000011489cnot3a9865.585Gasterosteus_aculeatus
ENSSFOG00015000248cnot36089.474ENSGACG00000009395cnot3b7489.474Gasterosteus_aculeatus
ENSSFOG00015000248cnot39165.875ENSGAGG00000012677CNOT38790.367Gopherus_agassizii
ENSSFOG00015000248cnot36990.032ENSGGOG00000012996CNOT38591.475Gorilla_gorilla
ENSSFOG00015000248cnot310069.770ENSHBUG00000005275cnot3a10070.378Haplochromis_burtoni
ENSSFOG00015000248cnot39189.545ENSHBUG00000019699cnot3b9889.545Haplochromis_burtoni
ENSSFOG00015000248cnot37483.721ENSHGLG00000008821CNOT39191.475Heterocephalus_glaber_female
ENSSFOG00015000248cnot36284.615ENSHGLG00100006181CNOT310081.609Heterocephalus_glaber_male
ENSSFOG00015000248cnot38787.671ENSHCOG00000020968cnot3a10070.227Hippocampus_comes
ENSSFOG00015000248cnot310066.957ENSIPUG00000009046cnot3b10066.630Ictalurus_punctatus
ENSSFOG00015000248cnot310065.338ENSIPUG00000000167cnot310079.556Ictalurus_punctatus
ENSSFOG00015000248cnot37190.032ENSSTOG00000028248CNOT38591.475Ictidomys_tridecemlineatus
ENSSFOG00015000248cnot37490.354ENSJJAG00000014594Cnot310081.609Jaculus_jaculus
ENSSFOG00015000248cnot310069.399ENSKMAG00000004863cnot3a10081.159Kryptolebias_marmoratus
ENSSFOG00015000248cnot310070.423ENSKMAG00000018723cnot3b10072.030Kryptolebias_marmoratus
ENSSFOG00015000248cnot37791.284ENSLBEG00000017296cnot3a8891.284Labrus_bergylta
ENSSFOG00015000248cnot39770.960ENSLBEG00000018278cnot3b10069.478Labrus_bergylta
ENSSFOG00015000248cnot37191.318ENSLACG00000009742CNOT39692.787Latimeria_chalumnae
ENSSFOG00015000248cnot35999.401ENSLOCG00000000005cnot3b8896.703Lepisosteus_oculatus
ENSSFOG00015000248cnot37189.103ENSLAFG00000022133CNOT38590.523Loxodonta_africana
ENSSFOG00015000248cnot38975.000ENSMFAG00000040073CNOT38591.475Macaca_fascicularis
ENSSFOG00015000248cnot37292.437ENSMMUG00000009698CNOT310098.039Macaca_mulatta
ENSSFOG00015000248cnot37990.032ENSMNEG00000036750CNOT38591.475Macaca_nemestrina
ENSSFOG00015000248cnot37990.032ENSMLEG00000036579CNOT38491.475Mandrillus_leucophaeus
ENSSFOG00015000248cnot35861.062ENSMAMG00000019397cnot3a10071.104Mastacembelus_armatus
ENSSFOG00015000248cnot310070.285ENSMAMG00000019357cnot3b10073.212Mastacembelus_armatus
ENSSFOG00015000248cnot310072.013ENSMZEG00005002466cnot3b10071.888Maylandia_zebra
ENSSFOG00015000248cnot310069.770ENSMZEG00005016304cnot3a10070.378Maylandia_zebra
ENSSFOG00015000248cnot39372.326ENSMAUG00000014996Cnot38591.803Mesocricetus_auratus
ENSSFOG00015000248cnot37089.241ENSMICG00000002370CNOT38491.475Microcebus_murinus
ENSSFOG00015000248cnot352100.000ENSMOCG00000013249Cnot363100.000Microtus_ochrogaster
ENSSFOG00015000248cnot310068.048ENSMMOG00000016446cnot3a10068.398Mola_mola
ENSSFOG00015000248cnot36992.050ENSMMOG00000013086cnot3b9791.667Mola_mola
ENSSFOG00015000248cnot36192.434ENSMODG00000004066CNOT37492.131Monodelphis_domestica
ENSSFOG00015000248cnot310069.989ENSMALG00000009204cnot3a10070.588Monopterus_albus
ENSSFOG00015000248cnot35890.783ENSMALG00000004936cnot3b7390.783Monopterus_albus
ENSSFOG00015000248cnot38090.354MGP_CAROLIEiJ_G0029095Cnot310097.000Mus_caroli
ENSSFOG00015000248cnot38090.354ENSMUSG00000035632Cnot310097.000Mus_musculus
ENSSFOG00015000248cnot39371.163MGP_PahariEiJ_G0020964Cnot310097.000Mus_pahari
ENSSFOG00015000248cnot38090.354MGP_SPRETEiJ_G0030148Cnot310097.000Mus_spretus
ENSSFOG00015000248cnot37990.354ENSMPUG00000010352CNOT39291.475Mustela_putorius_furo
ENSSFOG00015000248cnot38090.032ENSNGAG00000013266Cnot38591.475Nannospalax_galili
ENSSFOG00015000248cnot39377.031ENSNBRG00000003336cnot3b9590.265Neolamprologus_brichardi
ENSSFOG00015000248cnot310065.484ENSNBRG00000002401cnot3a10068.541Neolamprologus_brichardi
ENSSFOG00015000248cnot36990.032ENSNLEG00000006272CNOT38491.475Nomascus_leucogenys
ENSSFOG00015000248cnot39371.628ENSODEG00000000705CNOT310089.873Octodon_degus
ENSSFOG00015000248cnot310071.688ENSONIG00000007047cnot3b10072.366Oreochromis_niloticus
ENSSFOG00015000248cnot310070.099ENSONIG00000006568cnot3a10070.011Oreochromis_niloticus
ENSSFOG00015000248cnot37881.638ENSOCUG00000007691CNOT38591.475Oryctolagus_cuniculus
ENSSFOG00015000248cnot35758.011ENSORLG00000011174cnot3a10069.264Oryzias_latipes
ENSSFOG00015000248cnot35760.180ENSORLG00000005982cnot3b10072.216Oryzias_latipes
ENSSFOG00015000248cnot310071.212ENSORLG00020005779cnot3b10072.108Oryzias_latipes_hni
ENSSFOG00015000248cnot35757.827ENSORLG00020008009cnot3a10068.898Oryzias_latipes_hni
ENSSFOG00015000248cnot35760.108ENSORLG00015019021cnot3b10071.398Oryzias_latipes_hsok
ENSSFOG00015000248cnot35758.011ENSORLG00015013729cnot3a10069.231Oryzias_latipes_hsok
ENSSFOG00015000248cnot310070.982ENSOMEG00000015557cnot3b10071.041Oryzias_melastigma
ENSSFOG00015000248cnot310069.598ENSOMEG00000010309cnot3a10069.438Oryzias_melastigma
ENSSFOG00015000248cnot38481.638ENSOGAG00000006945CNOT38591.475Otolemur_garnettii
ENSSFOG00015000248cnot36990.032ENSPPAG00000002748CNOT38591.475Pan_paniscus
ENSSFOG00015000248cnot38381.356ENSPPRG00000011705CNOT39091.475Panthera_pardus
ENSSFOG00015000248cnot37380.165ENSPTIG00000008781CNOT39391.946Panthera_tigris_altaica
ENSSFOG00015000248cnot36990.032ENSPTRG00000011444CNOT38591.475Pan_troglodytes
ENSSFOG00015000248cnot36990.032ENSPTRG00000046717-8591.475Pan_troglodytes
ENSSFOG00015000248cnot37990.032ENSPANG00000009375CNOT38591.475Papio_anubis
ENSSFOG00015000248cnot310077.143ENSPKIG00000011733CNOT310077.354Paramormyrops_kingsleyae
ENSSFOG00015000248cnot37198.718ENSPKIG00000015967-9994.024Paramormyrops_kingsleyae
ENSSFOG00015000248cnot39862.611ENSPMGG00000022539cnot3b9962.860Periophthalmus_magnuspinnatus
ENSSFOG00015000248cnot38481.638ENSPEMG00000024185Cnot38591.803Peromyscus_maniculatus_bairdii
ENSSFOG00015000248cnot37092.105ENSPCIG00000023018CNOT39091.803Phascolarctos_cinereus
ENSSFOG00015000248cnot310070.499ENSPFOG00000007168cnot3b10070.174Poecilia_formosa
ENSSFOG00015000248cnot37690.066ENSPFOG00000008693cnot3a9288.141Poecilia_formosa
ENSSFOG00015000248cnot35759.375ENSPLAG00000013324cnot3a10068.581Poecilia_latipinna
ENSSFOG00015000248cnot310070.499ENSPLAG00000013457cnot3b10070.174Poecilia_latipinna
ENSSFOG00015000248cnot310070.607ENSPMEG00000010184cnot3b10070.282Poecilia_mexicana
ENSSFOG00015000248cnot35759.158ENSPMEG00000017718cnot3a10068.398Poecilia_mexicana
ENSSFOG00015000248cnot39964.565ENSPREG00000000662cnot3b9765.567Poecilia_reticulata
ENSSFOG00015000248cnot36894.872ENSPREG00000007592cnot3a9988.672Poecilia_reticulata
ENSSFOG00015000248cnot310057.701ENSPPYG00000010372CNOT38591.148Pongo_abelii
ENSSFOG00015000248cnot35294.068ENSPCAG00000011999CNOT35694.068Procavia_capensis
ENSSFOG00015000248cnot37089.241ENSPCOG00000017673CNOT38991.475Propithecus_coquereli
ENSSFOG00015000248cnot38482.709ENSPVAG00000015564CNOT38590.820Pteropus_vampyrus
ENSSFOG00015000248cnot310069.660ENSPNYG00000002282cnot3a10070.270Pundamilia_nyererei
ENSSFOG00015000248cnot39178.082ENSPNYG00000003358cnot3b9878.082Pundamilia_nyererei
ENSSFOG00015000248cnot310073.753ENSPNAG00000027459cnot3b10074.102Pygocentrus_nattereri
ENSSFOG00015000248cnot38884.099ENSPNAG00000017679cnot3a10070.043Pygocentrus_nattereri
ENSSFOG00015000248cnot37690.354ENSRNOG00000053234Cnot38591.803Rattus_norvegicus
ENSSFOG00015000248cnot37690.032ENSRBIG00000031025CNOT39091.475Rhinopithecus_bieti
ENSSFOG00015000248cnot37690.032ENSRROG00000003872CNOT39191.475Rhinopithecus_roxellana
ENSSFOG00015000248cnot38278.776ENSSBOG00000030268CNOT38591.475Saimiri_boliviensis_boliviensis
ENSSFOG00015000248cnot35759.232ENSSMAG00000013235cnot3a10069.173Scophthalmus_maximus
ENSSFOG00015000248cnot310069.716ENSSMAG00000016031cnot3b10071.474Scophthalmus_maximus
ENSSFOG00015000248cnot310071.744ENSSDUG00000003428cnot3b10074.070Seriola_dumerili
ENSSFOG00015000248cnot38294.872ENSSDUG00000008181cnot3a10087.356Seriola_dumerili
ENSSFOG00015000248cnot35357.752ENSSLDG00000014733cnot3a9969.667Seriola_lalandi_dorsalis
ENSSFOG00015000248cnot310071.849ENSSLDG00000014376cnot3b10074.176Seriola_lalandi_dorsalis
ENSSFOG00015000248cnot38484.046ENSSPUG00000008510CNOT38992.131Sphenodon_punctatus
ENSSFOG00015000248cnot310074.466ENSSPAG00000001429cnot3b10074.679Stegastes_partitus
ENSSFOG00015000248cnot38491.016ENSSPAG00000003858cnot3a9091.016Stegastes_partitus
ENSSFOG00015000248cnot37190.032ENSSSCG00000003264CNOT38491.475Sus_scrofa
ENSSFOG00015000248cnot310070.044ENSTRUG00000015732cnot3a10070.229Takifugu_rubripes
ENSSFOG00015000248cnot39991.935ENSTRUG00000007248cnot3b9191.935Takifugu_rubripes
ENSSFOG00015000248cnot39467.122ENSTNIG00000005663cnot3b10067.963Tetraodon_nigroviridis
ENSSFOG00015000248cnot39465.545ENSTNIG00000008082cnot3a10066.590Tetraodon_nigroviridis
ENSSFOG00015000248cnot37390.354ENSUAMG00000005234CNOT39091.803Ursus_americanus
ENSSFOG00015000248cnot35891.007ENSUMAG00000010934CNOT38891.339Ursus_maritimus
ENSSFOG00015000248cnot38090.032ENSVVUG00000008239CNOT38991.475Vulpes_vulpes
ENSSFOG00015000248cnot310059.935ENSXETG00000003166cnot38890.615Xenopus_tropicalis
ENSSFOG00015000248cnot39766.592ENSXCOG00000018976cnot3b9966.102Xiphophorus_couchianus
ENSSFOG00015000248cnot39088.128ENSXCOG00000019460cnot3a10085.714Xiphophorus_couchianus
ENSSFOG00015000248cnot310068.886ENSXMAG00000012273cnot3a10068.108Xiphophorus_maculatus
ENSSFOG00015000248cnot310069.762ENSXMAG00000014176cnot3b10069.412Xiphophorus_maculatus

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