EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSFOG00015000284 (Gene tree)
Gene ID
108937014
Gene Symbol
ythdf1
Alias
fb49c02|wu:fb49c02|wu:fi19h06|wu:fj87f09|wu:fp06c11|zgc:55657
Full Name
YTH N6-methyladenosine RNA binding protein 1
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Plus strand
Length
10033 bases
Position
chrKV411132.1:4130469-4140501
Accession
108937014
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015000324YTHPF04146.158.7e-4111
ENSSFOP00015000317YTHPF04146.158.9e-4111
ENSSFOP00015000337YTHPF04146.158.9e-4111
ENSSFOP00015000331YTHPF04146.159e-4111
ENSSFOP00015000343YTHPF04146.151e-4011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015000358-4171-ENSSFOP00015000331604 (aa)--
ENSSFOT00015000351-4408-ENSSFOP00015000324585 (aa)--
ENSSFOT00015000370-1758-ENSSFOP00015000343585 (aa)--
ENSSFOT00015000344-4816-ENSSFOP00015000317584 (aa)--
ENSSFOT00015000364-4141XM_018756752ENSSFOP00015000337594 (aa)XP_018612268A0A1W5AFQ9
Gene Model
Click here to download ENSSFOG00015000284's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015000284's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSFOG00015000284ythdf19960.350ENSSFOG00015001525ythdf29085.635
ENSSFOG00015000284ythdf19460.901ENSSFOG00015015445ythdf39760.688
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015000284ythdf110073.942ENSG00000149658YTHDF19974.603Homo_sapiens
ENSSFOG00015000284ythdf110078.778ENSAPOG00000010796YTHDF110079.612Acanthochromis_polyacanthus
ENSSFOG00015000284ythdf19975.523ENSAPOG00000004358ythdf19878.163Acanthochromis_polyacanthus
ENSSFOG00015000284ythdf19674.165ENSAMEG00000017323YTHDF19873.989Ailuropoda_melanoleuca
ENSSFOG00015000284ythdf19772.232ENSACIG00000011264ythdf19875.000Amphilophus_citrinellus
ENSSFOG00015000284ythdf110078.224ENSACIG00000020083YTHDF110078.057Amphilophus_citrinellus
ENSSFOG00015000284ythdf19975.645ENSAOCG00000022251ythdf19876.789Amphiprion_ocellaris
ENSSFOG00015000284ythdf110078.778ENSAOCG00000012567YTHDF110079.612Amphiprion_ocellaris
ENSSFOG00015000284ythdf110078.939ENSAPEG00000008750YTHDF110079.773Amphiprion_percula
ENSSFOG00015000284ythdf19975.645ENSAPEG00000021878ythdf19975.407Amphiprion_percula
ENSSFOG00015000284ythdf19975.689ENSATEG00000023840ythdf19975.556Anabas_testudineus
ENSSFOG00015000284ythdf110078.998ENSATEG00000005996YTHDF110078.392Anabas_testudineus
ENSSFOG00015000284ythdf19577.798ENSAPLG00000005985YTHDF19975.306Anas_platyrhynchos
ENSSFOG00015000284ythdf110075.254ENSACAG00000005560YTHDF110075.763Anolis_carolinensis
ENSSFOG00015000284ythdf110062.098ENSANAG00000021022-10060.847Aotus_nancymaae
ENSSFOG00015000284ythdf110073.559ENSANAG00000034786-10073.905Aotus_nancymaae
ENSSFOG00015000284ythdf110077.634ENSACLG00000025518YTHDF110077.544Astatotilapia_calliptera
ENSSFOG00015000284ythdf110071.501ENSBTAG00000010383YTHDF110072.762Bos_taurus
ENSSFOG00015000284ythdf110074.068ENSCJAG00000010056YTHDF110072.881Callithrix_jacchus
ENSSFOG00015000284ythdf18974.809ENSCAFG00000012772YTHDF19974.237Canis_familiaris
ENSSFOG00015000284ythdf18974.809ENSCAFG00020001214YTHDF19974.237Canis_lupus_dingo
ENSSFOG00015000284ythdf110071.164ENSCHIG00000026494YTHDF19973.192Capra_hircus
ENSSFOG00015000284ythdf19674.869ENSTSYG00000033436YTHDF19974.737Carlito_syrichta
ENSSFOG00015000284ythdf19573.750ENSCAPG00000002544YTHDF19472.500Cavia_aperea
ENSSFOG00015000284ythdf110072.203ENSCPOG00000010202YTHDF110072.373Cavia_porcellus
ENSSFOG00015000284ythdf110072.203ENSCCAG00000024650YTHDF110072.542Cebus_capucinus
ENSSFOG00015000284ythdf110074.068ENSCATG00000033272YTHDF110073.051Cercocebus_atys
ENSSFOG00015000284ythdf110073.898ENSCLAG00000005989YTHDF110073.649Chinchilla_lanigera
ENSSFOG00015000284ythdf110074.068ENSCSAG00000016266YTHDF110073.051Chlorocebus_sabaeus
ENSSFOG00015000284ythdf110075.804ENSCPBG00000027183YTHDF110075.593Chrysemys_picta_bellii
ENSSFOG00015000284ythdf19576.199ENSCANG00000029082YTHDF19874.423Colobus_angolensis_palliatus
ENSSFOG00015000284ythdf110074.407ENSCGRG00001016568Ythdf110073.729Cricetulus_griseus_chok1gshd
ENSSFOG00015000284ythdf19576.554ENSCGRG00000009207Ythdf19975.133Cricetulus_griseus_crigri
ENSSFOG00015000284ythdf19774.132ENSCSEG00000020623YTHDF19977.138Cynoglossus_semilaevis
ENSSFOG00015000284ythdf110078.571ENSCVAG00000014378YTHDF110078.896Cyprinodon_variegatus
ENSSFOG00015000284ythdf19973.171ENSCVAG00000017940ythdf19874.609Cyprinodon_variegatus
ENSSFOG00015000284ythdf110078.226ENSDARG00000016447ythdf110079.708Danio_rerio
ENSSFOG00015000284ythdf110073.729ENSDNOG00000043590YTHDF110073.898Dasypus_novemcinctus
ENSSFOG00015000284ythdf19573.835ENSDORG00000002879Ythdf19473.656Dipodomys_ordii
ENSSFOG00015000284ythdf17664.539ENSETEG00000017860-9564.179Echinops_telfairi
ENSSFOG00015000284ythdf110072.712ENSEASG00005023186YTHDF110072.542Equus_asinus_asinus
ENSSFOG00015000284ythdf19674.735ENSECAG00000019475YTHDF110073.905Equus_caballus
ENSSFOG00015000284ythdf19075.000ENSEEUG00000007461YTHDF110075.141Erinaceus_europaeus
ENSSFOG00015000284ythdf19975.559ENSELUG00000022768ythdf19976.537Esox_lucius
ENSSFOG00015000284ythdf19973.635ENSELUG00000001906YTHDF19975.862Esox_lucius
ENSSFOG00015000284ythdf110072.373ENSFCAG00000008917YTHDF110072.542Felis_catus
ENSSFOG00015000284ythdf110075.085ENSFALG00000010463YTHDF110075.593Ficedula_albicollis
ENSSFOG00015000284ythdf110073.390ENSFDAG00000019602YTHDF110072.542Fukomys_damarensis
ENSSFOG00015000284ythdf19975.041ENSFHEG00000023218ythdf19974.099Fundulus_heteroclitus
ENSSFOG00015000284ythdf110078.837ENSFHEG00000002540YTHDF19979.646Fundulus_heteroclitus
ENSSFOG00015000284ythdf110075.593ENSGALG00000005745YTHDF110076.381Gallus_gallus
ENSSFOG00015000284ythdf110078.296ENSGAFG00000021100YTHDF110078.317Gambusia_affinis
ENSSFOG00015000284ythdf110077.213ENSGACG00000002613YTHDF110076.568Gasterosteus_aculeatus
ENSSFOG00015000284ythdf19977.371ENSGACG00000012014ythdf19976.382Gasterosteus_aculeatus
ENSSFOG00015000284ythdf110075.635ENSGAGG00000003007YTHDF110075.254Gopherus_agassizii
ENSSFOG00015000284ythdf110074.281ENSGGOG00000008340YTHDF110072.712Gorilla_gorilla
ENSSFOG00015000284ythdf110077.796ENSHBUG00000004875YTHDF110077.706Haplochromis_burtoni
ENSSFOG00015000284ythdf19975.896ENSHBUG00000011284ythdf19976.068Haplochromis_burtoni
ENSSFOG00015000284ythdf110073.051ENSHGLG00000006585YTHDF110072.203Heterocephalus_glaber_female
ENSSFOG00015000284ythdf110073.051ENSHGLG00100004683YTHDF110072.203Heterocephalus_glaber_male
ENSSFOG00015000284ythdf110077.814ENSHCOG00000011303YTHDF110078.102Hippocampus_comes
ENSSFOG00015000284ythdf19974.141ENSHCOG00000008866ythdf19975.084Hippocampus_comes
ENSSFOG00015000284ythdf110078.049ENSIPUG00000000425Ythdf110078.361Ictalurus_punctatus
ENSSFOG00015000284ythdf19574.423ENSSTOG00000023001YTHDF19974.245Ictidomys_tridecemlineatus
ENSSFOG00015000284ythdf19576.199ENSJJAG00000013589Ythdf19973.890Jaculus_jaculus
ENSSFOG00015000284ythdf110079.321ENSKMAG00000017472YTHDF19980.531Kryptolebias_marmoratus
ENSSFOG00015000284ythdf19975.698ENSKMAG00000005595ythdf19974.783Kryptolebias_marmoratus
ENSSFOG00015000284ythdf19974.593ENSLBEG00000014105ythdf19975.203Labrus_bergylta
ENSSFOG00015000284ythdf110076.886ENSLBEG00000012068YTHDF110076.499Labrus_bergylta
ENSSFOG00015000284ythdf19475.360ENSLACG00000014195YTHDF19875.769Latimeria_chalumnae
ENSSFOG00015000284ythdf110081.695ENSLOCG00000005020ythdf110082.034Lepisosteus_oculatus
ENSSFOG00015000284ythdf110074.576ENSLAFG00000008884YTHDF110072.881Loxodonta_africana
ENSSFOG00015000284ythdf110074.068ENSMFAG00000042868YTHDF110073.051Macaca_fascicularis
ENSSFOG00015000284ythdf110074.068ENSMMUG00000009227YTHDF110073.051Macaca_mulatta
ENSSFOG00015000284ythdf110074.068ENSMNEG00000030851YTHDF110073.051Macaca_nemestrina
ENSSFOG00015000284ythdf19576.565ENSMLEG00000009252YTHDF19974.600Mandrillus_leucophaeus
ENSSFOG00015000284ythdf110078.998ENSMAMG00000011072YTHDF110077.868Mastacembelus_armatus
ENSSFOG00015000284ythdf19974.267ENSMAMG00000024255ythdf19973.052Mastacembelus_armatus
ENSSFOG00015000284ythdf110077.796ENSMZEG00005023596YTHDF110077.706Maylandia_zebra
ENSSFOG00015000284ythdf19975.856ENSMZEG00005026397ythdf19977.083Maylandia_zebra
ENSSFOG00015000284ythdf19577.620ENSMGAG00000006139YTHDF19876.021Meleagris_gallopavo
ENSSFOG00015000284ythdf110074.576ENSMAUG00000017660Ythdf110073.898Mesocricetus_auratus
ENSSFOG00015000284ythdf110073.559ENSMICG00000032266YTHDF110072.203Microcebus_murinus
ENSSFOG00015000284ythdf110073.898ENSMOCG00000013573Ythdf110073.051Microtus_ochrogaster
ENSSFOG00015000284ythdf19773.090ENSMMOG00000017500ythdf19775.253Mola_mola
ENSSFOG00015000284ythdf19976.733ENSMMOG00000020467YTHDF19976.596Mola_mola
ENSSFOG00015000284ythdf18977.143ENSMODG00000016842YTHDF110075.763Monodelphis_domestica
ENSSFOG00015000284ythdf19973.752ENSMALG00000015672ythdf110074.037Monopterus_albus
ENSSFOG00015000284ythdf110078.514ENSMALG00000022209YTHDF110077.922Monopterus_albus
ENSSFOG00015000284ythdf110073.729MGP_CAROLIEiJ_G0024790Ythdf110073.051Mus_caroli
ENSSFOG00015000284ythdf110073.729ENSMUSG00000038848Ythdf110073.051Mus_musculus
ENSSFOG00015000284ythdf110073.390MGP_PahariEiJ_G0026237Ythdf110072.712Mus_pahari
ENSSFOG00015000284ythdf110073.729MGP_SPRETEiJ_G0025715Ythdf110073.051Mus_spretus
ENSSFOG00015000284ythdf18972.433ENSMPUG00000008111YTHDF110071.619Mustela_putorius_furo
ENSSFOG00015000284ythdf19575.758ENSMLUG00000002241YTHDF19675.269Myotis_lucifugus
ENSSFOG00015000284ythdf110074.915ENSNGAG00000000334Ythdf110073.898Nannospalax_galili
ENSSFOG00015000284ythdf110076.549ENSNBRG00000015321YTHDF110076.884Neolamprologus_brichardi
ENSSFOG00015000284ythdf19773.199ENSNBRG00000008213ythdf19875.630Neolamprologus_brichardi
ENSSFOG00015000284ythdf19369.217ENSOPRG00000001758-9968.556Ochotona_princeps
ENSSFOG00015000284ythdf19759.649ENSODEG00000000074-10060.642Octodon_degus
ENSSFOG00015000284ythdf110071.695ENSODEG00000004380-10072.804Octodon_degus
ENSSFOG00015000284ythdf19773.658ENSONIG00000016799ythdf19975.635Oreochromis_niloticus
ENSSFOG00015000284ythdf110075.593ENSOANG00000003723YTHDF110075.593Ornithorhynchus_anatinus
ENSSFOG00015000284ythdf19974.551ENSORLG00000014665YTHDF19973.333Oryzias_latipes
ENSSFOG00015000284ythdf110077.977ENSORLG00000009739YTHDF110078.140Oryzias_latipes
ENSSFOG00015000284ythdf19975.163ENSORLG00020000307ythdf19973.453Oryzias_latipes_hni
ENSSFOG00015000284ythdf110077.778ENSORLG00020001332YTHDF110078.105Oryzias_latipes_hni
ENSSFOG00015000284ythdf19975.327ENSORLG00015006302ythdf19973.616Oryzias_latipes_hsok
ENSSFOG00015000284ythdf110077.814ENSORLG00015018321YTHDF110077.977Oryzias_latipes_hsok
ENSSFOG00015000284ythdf19975.163ENSOMEG00000002941YTHDF19974.055Oryzias_melastigma
ENSSFOG00015000284ythdf110078.571ENSOMEG00000011843YTHDF110078.431Oryzias_melastigma
ENSSFOG00015000284ythdf110072.373ENSOGAG00000000480YTHDF110072.203Otolemur_garnettii
ENSSFOG00015000284ythdf19671.002ENSOARG00000011639YTHDF19870.000Ovis_aries
ENSSFOG00015000284ythdf19576.786ENSPPAG00000023277YTHDF19974.067Pan_paniscus
ENSSFOG00015000284ythdf110072.712ENSPPRG00000020805YTHDF110073.559Panthera_pardus
ENSSFOG00015000284ythdf18282.573ENSPTIG00000017355YTHDF19582.158Panthera_tigris_altaica
ENSSFOG00015000284ythdf110074.281ENSPTRG00000013730YTHDF110072.712Pan_troglodytes
ENSSFOG00015000284ythdf110074.068ENSPANG00000021472YTHDF110073.051Papio_anubis
ENSSFOG00015000284ythdf19973.289ENSPKIG00000005427ythdf110072.712Paramormyrops_kingsleyae
ENSSFOG00015000284ythdf19978.163ENSPKIG00000005026YTHDF19878.957Paramormyrops_kingsleyae
ENSSFOG00015000284ythdf19576.868ENSPSIG00000005529YTHDF19875.979Pelodiscus_sinensis
ENSSFOG00015000284ythdf19579.046ENSPMGG00000009101YTHDF19978.756Periophthalmus_magnuspinnatus
ENSSFOG00015000284ythdf19276.335ENSPMGG00000015328ythdf19776.732Periophthalmus_magnuspinnatus
ENSSFOG00015000284ythdf19576.199ENSPEMG00000020199Ythdf19975.318Peromyscus_maniculatus_bairdii
ENSSFOG00015000284ythdf19777.153ENSPCIG00000017170YTHDF110076.336Phascolarctos_cinereus
ENSSFOG00015000284ythdf19976.268ENSPFOG00000005405ythdf19974.875Poecilia_formosa
ENSSFOG00015000284ythdf110078.296ENSPLAG00000006298YTHDF110078.317Poecilia_latipinna
ENSSFOG00015000284ythdf19976.268ENSPLAG00000006653ythdf19975.652Poecilia_latipinna
ENSSFOG00015000284ythdf19975.123ENSPMEG00000023753ythdf19975.347Poecilia_mexicana
ENSSFOG00015000284ythdf110078.457ENSPMEG00000020969-10078.479Poecilia_mexicana
ENSSFOG00015000284ythdf19974.754ENSPREG00000002173ythdf19975.652Poecilia_reticulata
ENSSFOG00015000284ythdf19778.218ENSPREG00000017662YTHDF19878.224Poecilia_reticulata
ENSSFOG00015000284ythdf18489.552ENSPPYG00000011226YTHDF19989.552Pongo_abelii
ENSSFOG00015000284ythdf18772.266ENSPCAG00000002452YTHDF110071.128Procavia_capensis
ENSSFOG00015000284ythdf110074.068ENSPCOG00000025969YTHDF110072.881Propithecus_coquereli
ENSSFOG00015000284ythdf19669.735ENSPVAG00000017568YTHDF19969.912Pteropus_vampyrus
ENSSFOG00015000284ythdf110077.796ENSPNYG00000002266YTHDF110077.706Pundamilia_nyererei
ENSSFOG00015000284ythdf19975.896ENSPNYG00000014007ythdf19977.083Pundamilia_nyererei
ENSSFOG00015000284ythdf110079.288ENSPNAG00000012447ythdf110080.719Pygocentrus_nattereri
ENSSFOG00015000284ythdf110073.729ENSRNOG00000027015Ythdf110073.390Rattus_norvegicus
ENSSFOG00015000284ythdf110073.390ENSRBIG00000044959YTHDF110072.542Rhinopithecus_bieti
ENSSFOG00015000284ythdf110073.390ENSRROG00000033014YTHDF110072.542Rhinopithecus_roxellana
ENSSFOG00015000284ythdf19575.806ENSSBOG00000027278YTHDF110073.333Saimiri_boliviensis_boliviensis
ENSSFOG00015000284ythdf19577.224ENSSHAG00000010430YTHDF18974.783Sarcophilus_harrisii
ENSSFOG00015000284ythdf17189.333ENSSMAG00000013715ythdf19181.707Scophthalmus_maximus
ENSSFOG00015000284ythdf19783.643ENSSMAG00000007635YTHDF19879.322Scophthalmus_maximus
ENSSFOG00015000284ythdf110075.748ENSSDUG00000015823YTHDF19977.336Seriola_dumerili
ENSSFOG00015000284ythdf19975.362ENSSDUG00000000435ythdf19877.990Seriola_dumerili
ENSSFOG00015000284ythdf19975.481ENSSLDG00000024948ythdf19974.716Seriola_lalandi_dorsalis
ENSSFOG00015000284ythdf110076.471ENSSLDG00000001054YTHDF19494.527Seriola_lalandi_dorsalis
ENSSFOG00015000284ythdf18976.952ENSSPUG00000015143YTHDF110076.806Sphenodon_punctatus
ENSSFOG00015000284ythdf19974.801ENSSPAG00000014989ythdf19974.434Stegastes_partitus
ENSSFOG00015000284ythdf110078.296ENSSPAG00000003666YTHDF110078.352Stegastes_partitus
ENSSFOG00015000284ythdf110070.558ENSSSCG00000040086YTHDF110071.791Sus_scrofa
ENSSFOG00015000284ythdf19577.442ENSTGUG00000007565YTHDF19976.021Taeniopygia_guttata
ENSSFOG00015000284ythdf19774.711ENSTRUG00000005049YTHDF19976.884Takifugu_rubripes
ENSSFOG00015000284ythdf19975.124ENSTRUG00000004288ythdf19975.712Takifugu_rubripes
ENSSFOG00015000284ythdf110074.329ENSTNIG00000003975YTHDF19975.916Tetraodon_nigroviridis
ENSSFOG00015000284ythdf19973.898ENSTNIG00000012490ythdf19975.874Tetraodon_nigroviridis
ENSSFOG00015000284ythdf19970.840ENSTTRG00000001804YTHDF19972.583Tursiops_truncatus
ENSSFOG00015000284ythdf19575.223ENSUAMG00000011021YTHDF110074.476Ursus_americanus
ENSSFOG00015000284ythdf18974.242ENSUMAG00000022290YTHDF110074.286Ursus_maritimus
ENSSFOG00015000284ythdf18974.618ENSVVUG00000015275YTHDF19974.046Vulpes_vulpes
ENSSFOG00015000284ythdf19576.157ENSXETG00000027086ythdf19775.801Xenopus_tropicalis
ENSSFOG00015000284ythdf19476.814ENSXCOG00000002490ythdf19476.523Xiphophorus_couchianus
ENSSFOG00015000284ythdf19877.467ENSXCOG00000008115YTHDF19977.537Xiphophorus_couchianus
ENSSFOG00015000284ythdf110078.457ENSXMAG00000015644YTHDF19979.823Xiphophorus_maculatus
ENSSFOG00015000284ythdf19975.041ENSXMAG00000008525ythdf19975.499Xiphophorus_maculatus

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