EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015000417 (Gene tree)
Gene ID: 108925756
Gene Symbol: rbpms
Alias: HERMES
Full Name: RNA binding protein%2C mRNA processing factor
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 21487 bases
Position: chrKV410846.1:1280196-1301682
Accession: 108925756
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015000488	RRM_1	PF00076.22	5.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015000516	-	756	XM_018737980	ENSSFOP00015000488	194 (aa)	XP_018593496	A0A1W4YYY7

Gene Model

Click here to download ENSSFOG00015000417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015000417's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015000417	rbpms	96	67.692	ENSSFOG00015010476	rbpms2b	99	70.330
ENSSFOG00015000417	rbpms	96	68.557	ENSSFOG00015022055	rbpms2	97	70.619
ENSSFOG00015000417	rbpms	97	85.106	ENSSFOG00015017481	-	99	85.106

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015000417	rbpms	99	82.474	ENSG00000157110	RBPMS	97	85.455	Homo_sapiens
ENSSFOG00015000417	rbpms	100	90.206	ENSAPOG00000022304	RBPMS	100	90.206	Acanthochromis_polyacanthus
ENSSFOG00015000417	rbpms	84	85.455	ENSAMEG00000001522	RBPMS	75	85.455	Ailuropoda_melanoleuca
ENSSFOG00015000417	rbpms	63	90.984	ENSACIG00000011395	RBPMS	66	90.984	Amphilophus_citrinellus
ENSSFOG00015000417	rbpms	100	90.206	ENSAOCG00000007731	RBPMS	100	90.206	Amphiprion_ocellaris
ENSSFOG00015000417	rbpms	100	90.206	ENSAPEG00000023543	RBPMS	100	90.206	Amphiprion_percula
ENSSFOG00015000417	rbpms	100	90.722	ENSATEG00000018184	RBPMS	100	90.722	Anabas_testudineus
ENSSFOG00015000417	rbpms	100	81.218	ENSACAG00000003012	RBPMS	100	81.218	Anolis_carolinensis
ENSSFOG00015000417	rbpms	99	82.474	ENSANAG00000028150	RBPMS	99	82.474	Aotus_nancymaae
ENSSFOG00015000417	rbpms	100	90.206	ENSACLG00000002926	RBPMS	100	90.206	Astatotilapia_calliptera
ENSSFOG00015000417	rbpms	97	88.830	ENSAMXG00000033491	rbpms	97	88.830	Astyanax_mexicanus
ENSSFOG00015000417	rbpms	100	82.143	ENSBTAG00000033727	RBPMS	81	82.486	Bos_taurus
ENSSFOG00015000417	rbpms	99	82.474	ENSCJAG00000012366	RBPMS	99	82.474	Callithrix_jacchus
ENSSFOG00015000417	rbpms	90	82.857	ENSCAFG00000006503	RBPMS	80	82.857	Canis_familiaris
ENSSFOG00015000417	rbpms	90	82.857	ENSCAFG00020001031	RBPMS	80	82.857	Canis_lupus_dingo
ENSSFOG00015000417	rbpms	100	75.127	ENSCHIG00000027156	RBPMS	100	75.127	Capra_hircus
ENSSFOG00015000417	rbpms	57	90.000	ENSTSYG00000013982	RBPMS	83	90.000	Carlito_syrichta
ENSSFOG00015000417	rbpms	99	82.990	ENSCPOG00000038597	RBPMS	99	82.990	Cavia_porcellus
ENSSFOG00015000417	rbpms	99	82.474	ENSCCAG00000033226	RBPMS	99	82.474	Cebus_capucinus
ENSSFOG00015000417	rbpms	99	82.474	ENSCATG00000036486	RBPMS	99	82.474	Cercocebus_atys
ENSSFOG00015000417	rbpms	89	87.356	ENSCLAG00000001518	RBPMS	100	87.356	Chinchilla_lanigera
ENSSFOG00015000417	rbpms	90	82.857	ENSCSAG00000015838	RBPMS	80	82.857	Chlorocebus_sabaeus
ENSSFOG00015000417	rbpms	79	88.387	ENSCHOG00000008745	RBPMS	79	88.387	Choloepus_hoffmanni
ENSSFOG00015000417	rbpms	100	81.538	ENSCPBG00000013437	RBPMS	100	81.538	Chrysemys_picta_bellii
ENSSFOG00015000417	rbpms	89	87.356	ENSCANG00000034997	RBPMS	100	87.356	Colobus_angolensis_palliatus
ENSSFOG00015000417	rbpms	100	78.173	ENSCGRG00001002814	Rbpms	100	81.726	Cricetulus_griseus_chok1gshd
ENSSFOG00015000417	rbpms	89	82.857	ENSCGRG00000006095	Rbpms	100	86.857	Cricetulus_griseus_crigri
ENSSFOG00015000417	rbpms	100	90.722	ENSCSEG00000002777	rbpms	99	92.265	Cynoglossus_semilaevis
ENSSFOG00015000417	rbpms	100	90.206	ENSCVAG00000013975	RBPMS	100	90.206	Cyprinodon_variegatus
ENSSFOG00015000417	rbpms	87	69.822	ENSDARG00000099396	rbpms	100	69.822	Danio_rerio
ENSSFOG00015000417	rbpms	90	83.051	ENSDNOG00000008126	RBPMS	81	83.051	Dasypus_novemcinctus
ENSSFOG00015000417	rbpms	90	83.429	ENSETEG00000017582	RBPMS	80	83.429	Echinops_telfairi
ENSSFOG00015000417	rbpms	79	88.387	ENSEASG00005016962	RBPMS	78	88.387	Equus_asinus_asinus
ENSSFOG00015000417	rbpms	90	83.429	ENSECAG00000020735	RBPMS	78	88.387	Equus_caballus
ENSSFOG00015000417	rbpms	100	87.629	ENSELUG00000009787	rbpms	100	87.629	Esox_lucius
ENSSFOG00015000417	rbpms	99	47.938	ENSFCAG00000022292	-	93	48.469	Felis_catus
ENSSFOG00015000417	rbpms	99	82.990	ENSFCAG00000025639	-	99	82.990	Felis_catus
ENSSFOG00015000417	rbpms	89	87.356	ENSFDAG00000012078	RBPMS	100	87.356	Fukomys_damarensis
ENSSFOG00015000417	rbpms	100	90.722	ENSFHEG00000000618	rbpms	100	90.722	Fundulus_heteroclitus
ENSSFOG00015000417	rbpms	77	54.667	ENSGMOG00000009646	-	100	54.667	Gadus_morhua
ENSSFOG00015000417	rbpms	100	90.206	ENSGAFG00000016566	RBPMS	100	90.206	Gambusia_affinis
ENSSFOG00015000417	rbpms	100	80.412	ENSGACG00000019471	rbpms	100	80.412	Gasterosteus_aculeatus
ENSSFOG00015000417	rbpms	59	86.087	ENSGAGG00000023634	RBPMS	53	83.740	Gopherus_agassizii
ENSSFOG00015000417	rbpms	100	90.206	ENSHBUG00000005888	RBPMS	100	90.206	Haplochromis_burtoni
ENSSFOG00015000417	rbpms	99	82.474	ENSHGLG00000002303	RBPMS	99	82.474	Heterocephalus_glaber_female
ENSSFOG00015000417	rbpms	89	87.356	ENSHGLG00100008787	RBPMS	100	87.356	Heterocephalus_glaber_male
ENSSFOG00015000417	rbpms	97	90.957	ENSHCOG00000005774	rbpms	98	90.957	Hippocampus_comes
ENSSFOG00015000417	rbpms	100	84.103	ENSIPUG00000012459	RBPMS	100	84.103	Ictalurus_punctatus
ENSSFOG00015000417	rbpms	99	82.990	ENSSTOG00000026546	RBPMS	99	82.990	Ictidomys_tridecemlineatus
ENSSFOG00015000417	rbpms	99	82.474	ENSJJAG00000014024	Rbpms	99	82.474	Jaculus_jaculus
ENSSFOG00015000417	rbpms	89	74.857	ENSKMAG00000006377	RBPMS	88	77.714	Kryptolebias_marmoratus
ENSSFOG00015000417	rbpms	100	89.691	ENSLBEG00000027989	RBPMS	97	94.798	Labrus_bergylta
ENSSFOG00015000417	rbpms	90	92.000	ENSLOCG00000013199	RBPMS	96	92.000	Lepisosteus_oculatus
ENSSFOG00015000417	rbpms	90	82.486	ENSLAFG00000000209	RBPMS	81	82.486	Loxodonta_africana
ENSSFOG00015000417	rbpms	99	82.474	ENSMFAG00000036911	RBPMS	99	82.474	Macaca_fascicularis
ENSSFOG00015000417	rbpms	99	82.474	ENSMMUG00000000458	RBPMS	99	82.474	Macaca_mulatta
ENSSFOG00015000417	rbpms	99	82.474	ENSMNEG00000043805	RBPMS	99	82.474	Macaca_nemestrina
ENSSFOG00015000417	rbpms	89	87.356	ENSMLEG00000015635	RBPMS	100	87.356	Mandrillus_leucophaeus
ENSSFOG00015000417	rbpms	68	89.313	ENSMAMG00000004604	RBPMS	71	86.765	Mastacembelus_armatus
ENSSFOG00015000417	rbpms	100	90.206	ENSMZEG00005000698	RBPMS	100	92.737	Maylandia_zebra
ENSSFOG00015000417	rbpms	90	85.143	ENSMGAG00000005088	RBPMS	90	85.143	Meleagris_gallopavo
ENSSFOG00015000417	rbpms	100	78.173	ENSMAUG00000018892	Rbpms	100	81.726	Mesocricetus_auratus
ENSSFOG00015000417	rbpms	99	79.381	ENSMICG00000001295	RBPMS	99	82.474	Microcebus_murinus
ENSSFOG00015000417	rbpms	100	78.173	ENSMOCG00000014009	Rbpms	100	81.726	Microtus_ochrogaster
ENSSFOG00015000417	rbpms	82	91.824	ENSMMOG00000012036	RBPMS	67	91.824	Mola_mola
ENSSFOG00015000417	rbpms	97	84.127	ENSMODG00000019006	RBPMS	92	82.474	Monodelphis_domestica
ENSSFOG00015000417	rbpms	100	87.629	ENSMALG00000003261	RBPMS	100	87.629	Monopterus_albus
ENSSFOG00015000417	rbpms	100	78.680	MGP_CAROLIEiJ_G0030970	Rbpms	100	82.234	Mus_caroli
ENSSFOG00015000417	rbpms	100	78.680	ENSMUSG00000031586	Rbpms	100	82.234	Mus_musculus
ENSSFOG00015000417	rbpms	99	78.974	MGP_PahariEiJ_G0021439	Rbpms	99	82.564	Mus_pahari
ENSSFOG00015000417	rbpms	100	78.680	MGP_SPRETEiJ_G0032087	Rbpms	100	82.234	Mus_spretus
ENSSFOG00015000417	rbpms	84	85.455	ENSMPUG00000011314	RBPMS	75	85.455	Mustela_putorius_furo
ENSSFOG00015000417	rbpms	100	82.653	ENSMLUG00000009391	RBPMS	100	84.177	Myotis_lucifugus
ENSSFOG00015000417	rbpms	90	82.857	ENSNGAG00000011141	Rbpms	80	82.857	Nannospalax_galili
ENSSFOG00015000417	rbpms	92	92.737	ENSNBRG00000003313	RBPMS	100	92.737	Neolamprologus_brichardi
ENSSFOG00015000417	rbpms	99	82.474	ENSNLEG00000036183	-	99	82.474	Nomascus_leucogenys
ENSSFOG00015000417	rbpms	67	82.308	ENSOPRG00000013151	RBPMS	59	82.308	Ochotona_princeps
ENSSFOG00015000417	rbpms	99	82.474	ENSODEG00000006700	RBPMS	99	82.474	Octodon_degus
ENSSFOG00015000417	rbpms	90	94.828	ENSONIG00000007546	RBPMS	100	94.828	Oreochromis_niloticus
ENSSFOG00015000417	rbpms	90	82.857	ENSOCUG00000008572	RBPMS	80	82.857	Oryctolagus_cuniculus
ENSSFOG00015000417	rbpms	100	89.691	ENSORLG00000004135	-	100	89.691	Oryzias_latipes
ENSSFOG00015000417	rbpms	100	89.691	ENSORLG00020016179	RBPMS	100	89.691	Oryzias_latipes_hni
ENSSFOG00015000417	rbpms	100	89.691	ENSORLG00015013770	RBPMS	100	89.691	Oryzias_latipes_hsok
ENSSFOG00015000417	rbpms	100	90.722	ENSOMEG00000005044	RBPMS	100	90.722	Oryzias_melastigma
ENSSFOG00015000417	rbpms	92	81.564	ENSOGAG00000030298	RBPMS	80	81.564	Otolemur_garnettii
ENSSFOG00015000417	rbpms	66	81.395	ENSOARG00000010366	RBPMS	90	81.395	Ovis_aries
ENSSFOG00015000417	rbpms	89	87.356	ENSPPAG00000033108	RBPMS	100	87.356	Pan_paniscus
ENSSFOG00015000417	rbpms	99	82.990	ENSPPRG00000004836	RBPMS	99	82.990	Panthera_pardus
ENSSFOG00015000417	rbpms	89	87.356	ENSPTIG00000015964	RBPMS	89	87.356	Panthera_tigris_altaica
ENSSFOG00015000417	rbpms	99	82.474	ENSPTRG00000020135	RBPMS	99	82.474	Pan_troglodytes
ENSSFOG00015000417	rbpms	99	82.474	ENSPANG00000008143	RBPMS	99	82.474	Papio_anubis
ENSSFOG00015000417	rbpms	100	91.237	ENSPKIG00000000535	-	100	91.237	Paramormyrops_kingsleyae
ENSSFOG00015000417	rbpms	97	87.766	ENSPKIG00000004836	rbpms	99	87.766	Paramormyrops_kingsleyae
ENSSFOG00015000417	rbpms	89	86.207	ENSPSIG00000006136	RBPMS	99	86.207	Pelodiscus_sinensis
ENSSFOG00015000417	rbpms	82	93.711	ENSPMGG00000018012	RBPMS	74	93.711	Periophthalmus_magnuspinnatus
ENSSFOG00015000417	rbpms	100	78.283	ENSPEMG00000021130	Rbpms	100	81.313	Peromyscus_maniculatus_bairdii
ENSSFOG00015000417	rbpms	92	85.000	ENSPCIG00000019298	-	65	87.742	Phascolarctos_cinereus
ENSSFOG00015000417	rbpms	100	90.206	ENSPFOG00000017158	RBPMS	100	90.206	Poecilia_formosa
ENSSFOG00015000417	rbpms	100	90.206	ENSPLAG00000010767	RBPMS	100	90.206	Poecilia_latipinna
ENSSFOG00015000417	rbpms	100	90.206	ENSPMEG00000009788	RBPMS	100	90.206	Poecilia_mexicana
ENSSFOG00015000417	rbpms	100	90.206	ENSPREG00000016959	RBPMS	100	90.206	Poecilia_reticulata
ENSSFOG00015000417	rbpms	90	82.857	ENSPPYG00000018487	RBPMS	80	82.857	Pongo_abelii
ENSSFOG00015000417	rbpms	57	90.000	ENSPCAG00000013493	-	100	90.000	Procavia_capensis
ENSSFOG00015000417	rbpms	69	83.582	ENSPCOG00000015948	RBPMS	75	85.385	Propithecus_coquereli
ENSSFOG00015000417	rbpms	90	83.051	ENSPVAG00000001661	RBPMS	81	83.051	Pteropus_vampyrus
ENSSFOG00015000417	rbpms	100	90.206	ENSPNYG00000001172	RBPMS	100	92.737	Pundamilia_nyererei
ENSSFOG00015000417	rbpms	97	90.426	ENSPNAG00000029160	RBPMS	97	90.426	Pygocentrus_nattereri
ENSSFOG00015000417	rbpms	92	76.923	ENSRNOG00000013328	Rbpms	88	80.769	Rattus_norvegicus
ENSSFOG00015000417	rbpms	89	87.356	ENSRBIG00000038218	RBPMS	100	87.356	Rhinopithecus_bieti
ENSSFOG00015000417	rbpms	99	82.474	ENSRROG00000042518	RBPMS	99	82.474	Rhinopithecus_roxellana
ENSSFOG00015000417	rbpms	99	81.959	ENSSBOG00000026670	RBPMS	99	81.959	Saimiri_boliviensis_boliviensis
ENSSFOG00015000417	rbpms	90	87.429	ENSSHAG00000010114	RBPMS	90	87.429	Sarcophilus_harrisii
ENSSFOG00015000417	rbpms	100	90.722	ENSSMAG00000010871	rbpms	100	90.722	Scophthalmus_maximus
ENSSFOG00015000417	rbpms	100	90.206	ENSSDUG00000010894	RBPMS	100	90.206	Seriola_dumerili
ENSSFOG00015000417	rbpms	100	90.206	ENSSLDG00000012916	RBPMS	100	90.206	Seriola_lalandi_dorsalis
ENSSFOG00015000417	rbpms	90	79.096	ENSSARG00000000274	RBPMS	81	79.096	Sorex_araneus
ENSSFOG00015000417	rbpms	93	82.967	ENSSPUG00000017525	RBPMS	70	82.967	Sphenodon_punctatus
ENSSFOG00015000417	rbpms	95	70.811	ENSSPAG00000004777	rbpms	82	87.313	Stegastes_partitus
ENSSFOG00015000417	rbpms	99	82.990	ENSSSCG00000015846	RBPMS	99	82.990	Sus_scrofa
ENSSFOG00015000417	rbpms	97	82.011	ENSTGUG00000001776	RBPMS	99	82.011	Taeniopygia_guttata
ENSSFOG00015000417	rbpms	100	88.660	ENSTRUG00000000041	RBPMS	100	88.660	Takifugu_rubripes
ENSSFOG00015000417	rbpms	90	82.955	ENSTTRG00000012451	RBPMS	81	82.955	Tursiops_truncatus
ENSSFOG00015000417	rbpms	60	86.207	ENSUAMG00000026353	RBPMS	76	86.207	Ursus_americanus
ENSSFOG00015000417	rbpms	84	86.503	ENSUMAG00000007347	RBPMS	76	87.821	Ursus_maritimus
ENSSFOG00015000417	rbpms	79	88.387	ENSVPAG00000010991	RBPMS	79	88.387	Vicugna_pacos
ENSSFOG00015000417	rbpms	99	82.474	ENSVVUG00000019770	RBPMS	99	82.474	Vulpes_vulpes
ENSSFOG00015000417	rbpms	89	87.356	ENSXETG00000011290	rbpms	100	87.356	Xenopus_tropicalis
ENSSFOG00015000417	rbpms	90	89.080	ENSXCOG00000002436	RBPMS	90	89.080	Xiphophorus_couchianus
ENSSFOG00015000417	rbpms	100	90.206	ENSXMAG00000027637	RBPMS	100	90.206	Xiphophorus_maculatus