EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015000550 (Gene tree)
Gene ID: 108920212
Gene Symbol: ssb
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 6207 bases
Position: chrKV411287.1:1756971-1763177
Accession: 108920212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015000741	RRM_1	PF00076.22	6e-10	1	1
ENSSFOP00015000741	RRM_3	PF08777.11	1.2e-28	1	1
ENSSFOP00015000741	La	PF05383.17	5.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015000769	-	4091	XM_018728809	ENSSFOP00015000741	405 (aa)	XP_018584325	A0A1W4Y7A2

Gene Model

Click here to download ENSSFOG00015000550's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015000550's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015000550	ssb	100	64.407	ENSG00000138385	SSB	100	70.833	Homo_sapiens
ENSSFOG00015000550	ssb	99	68.395	ENSAPOG00000003448	ssb	100	68.395	Acanthochromis_polyacanthus
ENSSFOG00015000550	ssb	100	61.848	ENSAMEG00000010507	SSB	99	61.848	Ailuropoda_melanoleuca
ENSSFOG00015000550	ssb	91	69.542	ENSACIG00000001738	ssb	97	69.272	Amphilophus_citrinellus
ENSSFOG00015000550	ssb	99	69.136	ENSAOCG00000020398	ssb	100	69.136	Amphiprion_ocellaris
ENSSFOG00015000550	ssb	99	69.383	ENSAPEG00000020395	ssb	100	69.383	Amphiprion_percula
ENSSFOG00015000550	ssb	99	70.443	ENSATEG00000016884	ssb	100	70.443	Anabas_testudineus
ENSSFOG00015000550	ssb	100	59.953	ENSAPLG00000006109	SSB	99	58.920	Anas_platyrhynchos
ENSSFOG00015000550	ssb	100	60.096	ENSACAG00000017008	SSB	99	60.870	Anolis_carolinensis
ENSSFOG00015000550	ssb	100	56.724	ENSANAG00000027195	-	99	57.284	Aotus_nancymaae
ENSSFOG00015000550	ssb	99	63.704	ENSACLG00000010798	ssb	100	64.691	Astatotilapia_calliptera
ENSSFOG00015000550	ssb	99	65.770	ENSAMXG00000012606	ssb	100	67.237	Astyanax_mexicanus
ENSSFOG00015000550	ssb	100	64.146	ENSBTAG00000008716	SSB	99	63.659	Bos_taurus
ENSSFOG00015000550	ssb	74	35.197	WBGene00016653	C44E4.4	76	35.197	Caenorhabditis_elegans
ENSSFOG00015000550	ssb	100	64.059	ENSCJAG00000045073	SSB	99	63.570	Callithrix_jacchus
ENSSFOG00015000550	ssb	100	64.059	ENSCAFG00000012418	SSB	99	63.570	Canis_familiaris
ENSSFOG00015000550	ssb	100	64.059	ENSCAFG00020002900	SSB	99	63.570	Canis_lupus_dingo
ENSSFOG00015000550	ssb	100	59.413	ENSCHIG00000022196	-	99	57.245	Capra_hircus
ENSSFOG00015000550	ssb	100	64.634	ENSCHIG00000022624	-	99	64.146	Capra_hircus
ENSSFOG00015000550	ssb	100	64.548	ENSTSYG00000000097	SSB	99	64.059	Carlito_syrichta
ENSSFOG00015000550	ssb	100	65.037	ENSCPOG00000003338	SSB	99	64.548	Cavia_porcellus
ENSSFOG00015000550	ssb	100	64.792	ENSCCAG00000035147	SSB	99	64.303	Cebus_capucinus
ENSSFOG00015000550	ssb	72	61.224	ENSCATG00000036701	SSB	84	60.544	Cercocebus_atys
ENSSFOG00015000550	ssb	99	48.020	ENSCATG00000042909	-	98	46.667	Cercocebus_atys
ENSSFOG00015000550	ssb	100	65.122	ENSCLAG00000015617	-	99	64.634	Chinchilla_lanigera
ENSSFOG00015000550	ssb	100	64.548	ENSCSAG00000015200	SSB	89	64.059	Chlorocebus_sabaeus
ENSSFOG00015000550	ssb	98	59.204	ENSCSAG00000018390	-	100	58.706	Chlorocebus_sabaeus
ENSSFOG00015000550	ssb	100	65.037	ENSCHOG00000007763	SSB	99	64.548	Choloepus_hoffmanni
ENSSFOG00015000550	ssb	100	67.312	ENSCPBG00000006519	SSB	99	67.070	Chrysemys_picta_bellii
ENSSFOG00015000550	ssb	100	56.968	ENSCANG00000033240	-	99	55.990	Colobus_angolensis_palliatus
ENSSFOG00015000550	ssb	100	64.548	ENSCANG00000027695	SSB	99	64.059	Colobus_angolensis_palliatus
ENSSFOG00015000550	ssb	93	51.842	ENSCANG00000028838	-	90	47.895	Colobus_angolensis_palliatus
ENSSFOG00015000550	ssb	100	58.596	ENSCGRG00001024831	Ssb	99	58.680	Cricetulus_griseus_chok1gshd
ENSSFOG00015000550	ssb	100	58.596	ENSCGRG00000005387	Ssb	99	58.680	Cricetulus_griseus_crigri
ENSSFOG00015000550	ssb	99	67.160	ENSCSEG00000011599	ssb	100	67.160	Cynoglossus_semilaevis
ENSSFOG00015000550	ssb	99	66.830	ENSCVAG00000021558	ssb	100	66.830	Cyprinodon_variegatus
ENSSFOG00015000550	ssb	99	66.420	ENSDARG00000029252	ssb	100	66.422	Danio_rerio
ENSSFOG00015000550	ssb	100	64.548	ENSDNOG00000013450	SSB	99	64.059	Dasypus_novemcinctus
ENSSFOG00015000550	ssb	100	60.145	ENSDORG00000005543	Ssb	99	59.268	Dipodomys_ordii
ENSSFOG00015000550	ssb	83	33.616	FBgn0011638	La	78	32.923	Drosophila_melanogaster
ENSSFOG00015000550	ssb	91	48.378	ENSEBUG00000001237	ssb	94	47.297	Eptatretus_burgeri
ENSSFOG00015000550	ssb	99	65.111	ENSEASG00005022835	SSB	99	64.619	Equus_asinus_asinus
ENSSFOG00015000550	ssb	100	65.037	ENSECAG00000018495	SSB	99	64.548	Equus_caballus
ENSSFOG00015000550	ssb	75	53.268	ENSEEUG00000008077	SSB	77	51.815	Erinaceus_europaeus
ENSSFOG00015000550	ssb	99	74.010	ENSELUG00000020929	ssb	100	74.010	Esox_lucius
ENSSFOG00015000550	ssb	100	64.548	ENSFCAG00000011601	SSB	99	64.059	Felis_catus
ENSSFOG00015000550	ssb	99	63.235	ENSFALG00000000930	SSB	99	63.235	Ficedula_albicollis
ENSSFOG00015000550	ssb	100	65.526	ENSFDAG00000000598	SSB	99	65.037	Fukomys_damarensis
ENSSFOG00015000550	ssb	73	66.113	ENSFHEG00000003268	ssb	94	65.359	Fundulus_heteroclitus
ENSSFOG00015000550	ssb	98	64.039	ENSGMOG00000002664	ssb	99	62.963	Gadus_morhua
ENSSFOG00015000550	ssb	99	64.059	ENSGALG00000009677	SSB	99	61.858	Gallus_gallus
ENSSFOG00015000550	ssb	99	66.504	ENSGAFG00000002749	ssb	100	67.157	Gambusia_affinis
ENSSFOG00015000550	ssb	99	64.078	ENSGACG00000005107	ssb	100	63.835	Gasterosteus_aculeatus
ENSSFOG00015000550	ssb	100	67.312	ENSGAGG00000007807	SSB	99	66.828	Gopherus_agassizii
ENSSFOG00015000550	ssb	100	54.878	ENSGGOG00000024891	-	99	54.034	Gorilla_gorilla
ENSSFOG00015000550	ssb	55	62.009	ENSGGOG00000023471	-	98	59.016	Gorilla_gorilla
ENSSFOG00015000550	ssb	99	63.457	ENSHBUG00000006584	ssb	100	64.444	Haplochromis_burtoni
ENSSFOG00015000550	ssb	99	59.902	ENSHGLG00000004478	-	99	59.268	Heterocephalus_glaber_female
ENSSFOG00015000550	ssb	100	64.337	ENSHGLG00000017580	-	99	63.614	Heterocephalus_glaber_female
ENSSFOG00015000550	ssb	95	59.439	ENSHGLG00000005832	-	99	57.908	Heterocephalus_glaber_female
ENSSFOG00015000550	ssb	100	57.627	ENSHGLG00100008767	-	99	56.724	Heterocephalus_glaber_male
ENSSFOG00015000550	ssb	100	64.337	ENSHGLG00100003084	-	99	63.614	Heterocephalus_glaber_male
ENSSFOG00015000550	ssb	98	64.160	ENSHCOG00000019011	ssb	99	63.728	Hippocampus_comes
ENSSFOG00015000550	ssb	99	67.892	ENSIPUG00000003681	SSB	100	67.883	Ictalurus_punctatus
ENSSFOG00015000550	ssb	100	64.634	ENSSTOG00000008416	SSB	99	64.146	Ictidomys_tridecemlineatus
ENSSFOG00015000550	ssb	89	51.105	ENSJJAG00000016250	-	94	49.171	Jaculus_jaculus
ENSSFOG00015000550	ssb	100	57.845	ENSJJAG00000023158	-	99	56.808	Jaculus_jaculus
ENSSFOG00015000550	ssb	99	67.734	ENSKMAG00000017317	ssb	100	67.734	Kryptolebias_marmoratus
ENSSFOG00015000550	ssb	99	69.877	ENSLBEG00000017345	ssb	100	69.877	Labrus_bergylta
ENSSFOG00015000550	ssb	100	61.017	ENSLACG00000014056	SSB	99	61.594	Latimeria_chalumnae
ENSSFOG00015000550	ssb	99	78.856	ENSLOCG00000007933	ssb	99	78.856	Lepisosteus_oculatus
ENSSFOG00015000550	ssb	72	50.171	ENSLAFG00000026721	-	96	48.805	Loxodonta_africana
ENSSFOG00015000550	ssb	100	56.479	ENSLAFG00000028909	-	99	55.501	Loxodonta_africana
ENSSFOG00015000550	ssb	100	62.353	ENSLAFG00000000867	-	99	60.849	Loxodonta_africana
ENSSFOG00015000550	ssb	88	57.382	ENSMFAG00000041478	-	90	58.642	Macaca_fascicularis
ENSSFOG00015000550	ssb	100	64.548	ENSMFAG00000039066	SSB	99	64.059	Macaca_fascicularis
ENSSFOG00015000550	ssb	100	55.501	ENSMMUG00000011724	-	96	54.815	Macaca_mulatta
ENSSFOG00015000550	ssb	99	47.277	ENSMMUG00000039889	-	99	46.173	Macaca_mulatta
ENSSFOG00015000550	ssb	100	64.548	ENSMMUG00000023051	SSB	99	64.059	Macaca_mulatta
ENSSFOG00015000550	ssb	88	57.382	ENSMNEG00000034698	-	90	58.642	Macaca_nemestrina
ENSSFOG00015000550	ssb	100	55.448	ENSMNEG00000028321	SSB	82	72.973	Macaca_nemestrina
ENSSFOG00015000550	ssb	100	64.548	ENSMLEG00000035717	SSB	99	64.059	Mandrillus_leucophaeus
ENSSFOG00015000550	ssb	100	44.743	ENSMLEG00000042644	-	98	42.222	Mandrillus_leucophaeus
ENSSFOG00015000550	ssb	99	69.704	ENSMAMG00000004800	ssb	100	69.704	Mastacembelus_armatus
ENSSFOG00015000550	ssb	99	63.704	ENSMZEG00005005749	ssb	100	64.691	Maylandia_zebra
ENSSFOG00015000550	ssb	99	63.570	ENSMGAG00000010328	SSB	95	67.513	Meleagris_gallopavo
ENSSFOG00015000550	ssb	98	59.701	ENSMICG00000033304	-	94	60.484	Microcebus_murinus
ENSSFOG00015000550	ssb	99	65.356	ENSMICG00000028252	-	99	64.865	Microcebus_murinus
ENSSFOG00015000550	ssb	100	52.451	ENSMODG00000019271	-	99	51.961	Monodelphis_domestica
ENSSFOG00015000550	ssb	100	60.766	ENSMODG00000008227	-	99	60.048	Monodelphis_domestica
ENSSFOG00015000550	ssb	100	49.512	ENSMODG00000007027	-	99	50.244	Monodelphis_domestica
ENSSFOG00015000550	ssb	89	71.978	ENSMALG00000008045	ssb	90	71.698	Monopterus_albus
ENSSFOG00015000550	ssb	100	58.019	MGP_CAROLIEiJ_G0023629	-	96	68.421	Mus_caroli
ENSSFOG00015000550	ssb	100	57.311	ENSMUSG00000068882	Ssb	96	68.421	Mus_musculus
ENSSFOG00015000550	ssb	100	57.311	MGP_PahariEiJ_G0025081	-	100	66.486	Mus_pahari
ENSSFOG00015000550	ssb	100	57.311	MGP_SPRETEiJ_G0024551	Ssb	96	68.421	Mus_spretus
ENSSFOG00015000550	ssb	100	65.281	ENSMPUG00000000785	SSB	99	64.792	Mustela_putorius_furo
ENSSFOG00015000550	ssb	100	62.322	ENSMLUG00000016316	SSB	99	62.085	Myotis_lucifugus
ENSSFOG00015000550	ssb	99	63.951	ENSNBRG00000012661	ssb	100	64.938	Neolamprologus_brichardi
ENSSFOG00015000550	ssb	83	52.802	ENSNLEG00000028754	-	76	51.385	Nomascus_leucogenys
ENSSFOG00015000550	ssb	100	64.303	ENSNLEG00000004958	SSB	99	63.814	Nomascus_leucogenys
ENSSFOG00015000550	ssb	61	69.076	ENSMEUG00000001650	-	100	69.076	Notamacropus_eugenii
ENSSFOG00015000550	ssb	94	64.042	ENSODEG00000004202	-	99	63.780	Octodon_degus
ENSSFOG00015000550	ssb	99	65.764	ENSONIG00000008776	ssb	100	65.764	Oreochromis_niloticus
ENSSFOG00015000550	ssb	100	63.570	ENSOANG00000008543	SSB	99	64.059	Ornithorhynchus_anatinus
ENSSFOG00015000550	ssb	100	64.792	ENSOCUG00000010396	SSB	99	64.548	Oryctolagus_cuniculus
ENSSFOG00015000550	ssb	99	66.010	ENSORLG00000017208	ssb	100	65.271	Oryzias_latipes
ENSSFOG00015000550	ssb	99	65.764	ENSORLG00020022574	ssb	100	65.025	Oryzias_latipes_hni
ENSSFOG00015000550	ssb	99	66.256	ENSORLG00015016592	ssb	100	65.517	Oryzias_latipes_hsok
ENSSFOG00015000550	ssb	99	68.069	ENSOMEG00000003193	ssb	100	68.069	Oryzias_melastigma
ENSSFOG00015000550	ssb	100	60.706	ENSOGAG00000029768	SSB	99	60.235	Otolemur_garnettii
ENSSFOG00015000550	ssb	100	64.878	ENSOARG00000002906	SSB	99	64.390	Ovis_aries
ENSSFOG00015000550	ssb	92	52.139	ENSPPAG00000006189	-	95	49.465	Pan_paniscus
ENSSFOG00015000550	ssb	100	64.407	ENSPPAG00000042673	SSB	99	63.923	Pan_paniscus
ENSSFOG00015000550	ssb	100	54.146	ENSPPAG00000032427	-	100	63.566	Pan_paniscus
ENSSFOG00015000550	ssb	100	64.548	ENSPPRG00000006599	SSB	99	64.059	Panthera_pardus
ENSSFOG00015000550	ssb	100	64.548	ENSPTIG00000011021	SSB	97	64.059	Panthera_tigris_altaica
ENSSFOG00015000550	ssb	100	64.407	ENSPTRG00000012620	SSB	99	63.923	Pan_troglodytes
ENSSFOG00015000550	ssb	100	51.100	ENSPTRG00000042880	-	99	48.662	Pan_troglodytes
ENSSFOG00015000550	ssb	95	43.959	ENSPANG00000031877	-	91	42.597	Papio_anubis
ENSSFOG00015000550	ssb	100	64.548	ENSPANG00000007440	SSB	99	64.059	Papio_anubis
ENSSFOG00015000550	ssb	99	48.020	ENSPANG00000034126	-	98	45.833	Papio_anubis
ENSSFOG00015000550	ssb	100	83.990	ENSPKIG00000019325	ssb	100	84.483	Paramormyrops_kingsleyae
ENSSFOG00015000550	ssb	100	66.586	ENSPSIG00000002265	SSB	93	66.344	Pelodiscus_sinensis
ENSSFOG00015000550	ssb	86	61.605	ENSPMGG00000020075	ssb	91	61.605	Periophthalmus_magnuspinnatus
ENSSFOG00015000550	ssb	97	47.368	ENSPMAG00000002982	ssb	99	45.561	Petromyzon_marinus
ENSSFOG00015000550	ssb	100	63.081	ENSPCIG00000028591	-	99	63.081	Phascolarctos_cinereus
ENSSFOG00015000550	ssb	99	66.749	ENSPFOG00000009650	ssb	100	66.749	Poecilia_formosa
ENSSFOG00015000550	ssb	99	66.749	ENSPLAG00000020498	ssb	100	66.749	Poecilia_latipinna
ENSSFOG00015000550	ssb	99	66.995	ENSPMEG00000001051	ssb	100	66.995	Poecilia_mexicana
ENSSFOG00015000550	ssb	91	69.169	ENSPREG00000003708	ssb	98	69.169	Poecilia_reticulata
ENSSFOG00015000550	ssb	100	64.303	ENSPPYG00000012919	SSB	99	63.814	Pongo_abelii
ENSSFOG00015000550	ssb	95	62.371	ENSPCAG00000010276	SSB	99	62.371	Procavia_capensis
ENSSFOG00015000550	ssb	100	57.702	ENSPCOG00000023189	-	99	57.213	Propithecus_coquereli
ENSSFOG00015000550	ssb	100	62.347	ENSPCOG00000015741	-	99	61.858	Propithecus_coquereli
ENSSFOG00015000550	ssb	87	67.042	ENSPVAG00000006615	SSB	99	66.197	Pteropus_vampyrus
ENSSFOG00015000550	ssb	99	63.704	ENSPNYG00000006444	ssb	100	64.691	Pundamilia_nyererei
ENSSFOG00015000550	ssb	99	69.363	ENSPNAG00000011708	ssb	100	69.586	Pygocentrus_nattereri
ENSSFOG00015000550	ssb	100	58.394	ENSRNOG00000011606	AABR07061825.1	99	57.740	Rattus_norvegicus
ENSSFOG00015000550	ssb	100	57.783	ENSRNOG00000007998	Ssb	99	56.429	Rattus_norvegicus
ENSSFOG00015000550	ssb	94	56.136	ENSRBIG00000041232	-	98	55.875	Rhinopithecus_bieti
ENSSFOG00015000550	ssb	90	58.197	ENSRBIG00000041608	-	98	56.557	Rhinopithecus_bieti
ENSSFOG00015000550	ssb	99	47.901	ENSRBIG00000029918	-	98	44.444	Rhinopithecus_bieti
ENSSFOG00015000550	ssb	100	55.206	ENSRBIG00000041972	SSB	88	73.043	Rhinopithecus_bieti
ENSSFOG00015000550	ssb	90	61.475	ENSRROG00000034102	-	89	60.929	Rhinopithecus_roxellana
ENSSFOG00015000550	ssb	99	53.333	ENSRROG00000007149	-	99	49.630	Rhinopithecus_roxellana
ENSSFOG00015000550	ssb	98	55.890	ENSRROG00000031684	-	99	55.639	Rhinopithecus_roxellana
ENSSFOG00015000550	ssb	100	64.548	ENSRROG00000040346	SSB	99	64.059	Rhinopithecus_roxellana
ENSSFOG00015000550	ssb	100	64.548	ENSSBOG00000027204	SSB	99	64.059	Saimiri_boliviensis_boliviensis
ENSSFOG00015000550	ssb	100	63.325	ENSSHAG00000018062	SSB	99	63.814	Sarcophilus_harrisii
ENSSFOG00015000550	ssb	99	63.772	ENSSMAG00000013885	ssb	99	70.620	Scophthalmus_maximus
ENSSFOG00015000550	ssb	99	70.936	ENSSDUG00000020117	ssb	100	70.936	Seriola_dumerili
ENSSFOG00015000550	ssb	99	68.069	ENSSLDG00000002525	ssb	100	68.069	Seriola_lalandi_dorsalis
ENSSFOG00015000550	ssb	95	57.623	ENSSARG00000007747	SSB	99	56.589	Sorex_araneus
ENSSFOG00015000550	ssb	100	67.233	ENSSPUG00000012112	SSB	99	66.990	Sphenodon_punctatus
ENSSFOG00015000550	ssb	99	68.148	ENSSPAG00000005696	ssb	100	68.148	Stegastes_partitus
ENSSFOG00015000550	ssb	94	61.198	ENSSSCG00000015938	SSB	94	59.474	Sus_scrofa
ENSSFOG00015000550	ssb	99	62.439	ENSTGUG00000007942	SSB	99	62.439	Taeniopygia_guttata
ENSSFOG00015000550	ssb	99	66.667	ENSTRUG00000017839	ssb	100	66.667	Takifugu_rubripes
ENSSFOG00015000550	ssb	90	65.405	ENSTNIG00000000915	ssb	100	65.135	Tetraodon_nigroviridis
ENSSFOG00015000550	ssb	82	73.043	ENSTBEG00000009056	SSB	82	73.043	Tupaia_belangeri
ENSSFOG00015000550	ssb	100	64.303	ENSTTRG00000002152	SSB	99	63.081	Tursiops_truncatus
ENSSFOG00015000550	ssb	91	67.116	ENSUAMG00000027833	SSB	97	66.577	Ursus_americanus
ENSSFOG00015000550	ssb	100	64.303	ENSUMAG00000013907	SSB	99	63.814	Ursus_maritimus
ENSSFOG00015000550	ssb	100	64.548	ENSVPAG00000007183	SSB	99	64.059	Vicugna_pacos
ENSSFOG00015000550	ssb	100	64.059	ENSVVUG00000016573	SSB	77	63.457	Vulpes_vulpes
ENSSFOG00015000550	ssb	99	56.876	ENSXETG00000025402	ssb	99	56.876	Xenopus_tropicalis
ENSSFOG00015000550	ssb	91	66.846	ENSXCOG00000019109	ssb	93	70.635	Xiphophorus_couchianus
ENSSFOG00015000550	ssb	99	66.015	ENSXMAG00000004888	ssb	100	66.015	Xiphophorus_maculatus