EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015000573 (Gene tree)
Gene ID: 108928025
Gene Symbol: gars
Alias: metronome|mrn|si:dkey-276i5.1|wu:fb02f03
Full Name: glycyl-tRNA synthetase
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 12940 bases
Position: chrKV410882.1:1279760-1292699
Accession: 108928025
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015000849	HGTP_anticodon	PF03129.20	2.6e-23	1	1
ENSSFOP00015000834	HGTP_anticodon	PF03129.20	3e-23	1	1
ENSSFOP00015000834	tRNA-synt_2b	PF00587.25	3.7e-10	1	1
ENSSFOP00015000849	tRNA-synt_2b	PF00587.25	3.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015000877	-	2280	-	ENSSFOP00015000849	759 (aa)	-	-
ENSSFOT00015000862	-	3134	XM_018741767	ENSSFOP00015000834	763 (aa)	XP_018597283	A0A1W4Z9A1

Gene Model

Click here to download ENSSFOG00015000573's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015000573's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015000573	gars	90	86.569	ENSG00000106105	GARS	93	86.569	Homo_sapiens
ENSSFOG00015000573	gars	89	82.794	ENSAPOG00000020089	gars	99	82.794	Acanthochromis_polyacanthus
ENSSFOG00015000573	gars	100	83.833	ENSAPOG00000019999	gars	92	90.462	Acanthochromis_polyacanthus
ENSSFOG00015000573	gars	90	86.715	ENSAMEG00000006652	GARS	93	86.715	Ailuropoda_melanoleuca
ENSSFOG00015000573	gars	100	83.225	ENSACIG00000020744	gars	92	90.262	Amphilophus_citrinellus
ENSSFOG00015000573	gars	89	85.059	ENSACIG00000020797	gars	99	85.059	Amphilophus_citrinellus
ENSSFOG00015000573	gars	100	84.355	ENSAOCG00000009108	gars	92	91.040	Amphiprion_ocellaris
ENSSFOG00015000573	gars	67	87.255	ENSAOCG00000002479	gars	100	87.255	Amphiprion_ocellaris
ENSSFOG00015000573	gars	90	82.969	ENSAPEG00000018903	gars	100	82.969	Amphiprion_percula
ENSSFOG00015000573	gars	100	83.963	ENSAPEG00000018850	gars	92	90.607	Amphiprion_percula
ENSSFOG00015000573	gars	100	82.794	ENSATEG00000008784	gars	100	90.440	Anabas_testudineus
ENSSFOG00015000573	gars	61	88.578	ENSAPLG00000015638	-	100	88.578	Anas_platyrhynchos
ENSSFOG00015000573	gars	90	85.860	ENSACAG00000005601	GARS	100	85.860	Anolis_carolinensis
ENSSFOG00015000573	gars	90	86.423	ENSANAG00000022536	GARS	100	86.423	Aotus_nancymaae
ENSSFOG00015000573	gars	100	83.377	ENSACLG00000027174	gars	95	85.636	Astatotilapia_calliptera
ENSSFOG00015000573	gars	89	84.218	ENSACLG00000027158	gars	99	84.218	Astatotilapia_calliptera
ENSSFOG00015000573	gars	99	78.808	ENSAMXG00000014895	gars	96	91.290	Astyanax_mexicanus
ENSSFOG00015000573	gars	90	85.839	ENSBTAG00000018972	GARS	93	85.839	Bos_taurus
ENSSFOG00015000573	gars	98	53.217	WBGene00001744	gars-1	99	56.696	Caenorhabditis_elegans
ENSSFOG00015000573	gars	90	86.423	ENSCJAG00000008595	GARS	93	86.423	Callithrix_jacchus
ENSSFOG00015000573	gars	90	86.988	ENSCAFG00000003086	GARS	86	86.483	Canis_familiaris
ENSSFOG00015000573	gars	90	86.988	ENSCAFG00020004272	GARS	99	86.988	Canis_lupus_dingo
ENSSFOG00015000573	gars	90	85.401	ENSCHIG00000016912	GARS	100	86.039	Capra_hircus
ENSSFOG00015000573	gars	90	86.861	ENSTSYG00000008538	GARS	93	86.861	Carlito_syrichta
ENSSFOG00015000573	gars	82	68.153	ENSCAPG00000007526	GARS	100	68.153	Cavia_aperea
ENSSFOG00015000573	gars	88	84.593	ENSCPOG00000007547	GARS	93	84.593	Cavia_porcellus
ENSSFOG00015000573	gars	90	86.569	ENSCCAG00000011512	GARS	93	86.569	Cebus_capucinus
ENSSFOG00015000573	gars	91	85.426	ENSCATG00000036699	GARS	94	85.426	Cercocebus_atys
ENSSFOG00015000573	gars	91	85.983	ENSCLAG00000007985	GARS	97	85.983	Chinchilla_lanigera
ENSSFOG00015000573	gars	91	85.426	ENSCSAG00000014588	GARS	94	85.426	Chlorocebus_sabaeus
ENSSFOG00015000573	gars	90	74.599	ENSCHOG00000003253	GARS	92	74.599	Choloepus_hoffmanni
ENSSFOG00015000573	gars	87	87.087	ENSCPBG00000019482	GARS	91	87.087	Chrysemys_picta_bellii
ENSSFOG00015000573	gars	88	63.501	ENSCING00000008937	-	99	63.501	Ciona_intestinalis
ENSSFOG00015000573	gars	91	85.281	ENSCANG00000027727	GARS	94	85.281	Colobus_angolensis_palliatus
ENSSFOG00015000573	gars	91	85.079	ENSCGRG00001020450	Gars	99	81.744	Cricetulus_griseus_chok1gshd
ENSSFOG00015000573	gars	87	86.937	ENSCGRG00000008342	Gars	94	86.937	Cricetulus_griseus_crigri
ENSSFOG00015000573	gars	89	77.729	ENSCSEG00000017654	gars	98	77.729	Cynoglossus_semilaevis
ENSSFOG00015000573	gars	100	84.334	ENSCSEG00000017671	gars	95	86.475	Cynoglossus_semilaevis
ENSSFOG00015000573	gars	100	83.442	ENSCVAG00000007149	gars	91	90.776	Cyprinodon_variegatus
ENSSFOG00015000573	gars	90	90.698	ENSDARG00000059070	gars	99	90.698	Danio_rerio
ENSSFOG00015000573	gars	90	87.153	ENSDNOG00000046478	GARS	100	87.557	Dasypus_novemcinctus
ENSSFOG00015000573	gars	90	85.401	ENSDORG00000002672	Gars	94	85.401	Dipodomys_ordii
ENSSFOG00015000573	gars	92	59.433	FBgn0027088	GlyRS	99	61.185	Drosophila_melanogaster
ENSSFOG00015000573	gars	82	83.784	ENSETEG00000012196	GARS	98	83.784	Echinops_telfairi
ENSSFOG00015000573	gars	63	80.208	ENSEBUG00000002254	gars	89	80.208	Eptatretus_burgeri
ENSSFOG00015000573	gars	63	74.948	ENSEBUG00000002654	gars	87	74.948	Eptatretus_burgeri
ENSSFOG00015000573	gars	90	87.153	ENSEASG00005000388	GARS	93	87.153	Equus_asinus_asinus
ENSSFOG00015000573	gars	90	87.299	ENSECAG00000019373	GARS	93	87.299	Equus_caballus
ENSSFOG00015000573	gars	99	83.007	ENSELUG00000003692	gars	96	84.783	Esox_lucius
ENSSFOG00015000573	gars	90	86.569	ENSFCAG00000011415	GARS	81	86.569	Felis_catus
ENSSFOG00015000573	gars	81	87.013	ENSFALG00000006550	GARS	100	87.013	Ficedula_albicollis
ENSSFOG00015000573	gars	87	86.316	ENSFDAG00000014466	GARS	100	86.316	Fukomys_damarensis
ENSSFOG00015000573	gars	100	83.485	ENSFHEG00000013189	gars	95	86.202	Fundulus_heteroclitus
ENSSFOG00015000573	gars	82	78.365	ENSGMOG00000008856	-	100	78.365	Gadus_morhua
ENSSFOG00015000573	gars	99	81.520	ENSGMOG00000010728	gars	93	86.494	Gadus_morhua
ENSSFOG00015000573	gars	90	86.277	ENSGALG00000005694	GARS	100	86.277	Gallus_gallus
ENSSFOG00015000573	gars	100	84.334	ENSGAFG00000005228	gars	98	86.721	Gambusia_affinis
ENSSFOG00015000573	gars	100	83.617	ENSGACG00000003410	gars	92	88.728	Gasterosteus_aculeatus
ENSSFOG00015000573	gars	81	87.844	ENSGAGG00000017755	GARS	99	87.844	Gopherus_agassizii
ENSSFOG00015000573	gars	90	86.569	ENSGGOG00000004916	GARS	93	86.569	Gorilla_gorilla
ENSSFOG00015000573	gars	100	83.639	ENSHBUG00000016481	gars	95	85.773	Haplochromis_burtoni
ENSSFOG00015000573	gars	89	83.628	ENSHBUG00000000815	gars	99	83.628	Haplochromis_burtoni
ENSSFOG00015000573	gars	90	86.423	ENSHGLG00000016342	GARS	93	86.423	Heterocephalus_glaber_female
ENSSFOG00015000573	gars	90	85.401	ENSHGLG00100006787	GARS	97	85.401	Heterocephalus_glaber_male
ENSSFOG00015000573	gars	52	62.121	ENSHCOG00000005286	gars	100	62.121	Hippocampus_comes
ENSSFOG00015000573	gars	90	85.547	ENSHCOG00000005261	gars	100	85.547	Hippocampus_comes
ENSSFOG00015000573	gars	100	77.982	ENSIPUG00000011443	gars	92	82.948	Ictalurus_punctatus
ENSSFOG00015000573	gars	90	85.549	ENSSTOG00000015493	GARS	91	85.549	Ictidomys_tridecemlineatus
ENSSFOG00015000573	gars	91	84.460	ENSJJAG00000022474	Gars	99	84.460	Jaculus_jaculus
ENSSFOG00015000573	gars	100	84.047	ENSKMAG00000010428	gars	91	91.228	Kryptolebias_marmoratus
ENSSFOG00015000573	gars	99	83.617	ENSLBEG00000019228	gars	95	86.245	Labrus_bergylta
ENSSFOG00015000573	gars	89	84.320	ENSLBEG00000019179	gars	100	84.320	Labrus_bergylta
ENSSFOG00015000573	gars	51	80.670	ENSLBEG00000013122	-	100	80.670	Labrus_bergylta
ENSSFOG00015000573	gars	68	87.692	ENSLACG00000002810	GARS	100	87.692	Latimeria_chalumnae
ENSSFOG00015000573	gars	100	84.967	ENSLOCG00000009688	gars	91	91.134	Lepisosteus_oculatus
ENSSFOG00015000573	gars	90	86.423	ENSLAFG00000002496	GARS	99	85.444	Loxodonta_africana
ENSSFOG00015000573	gars	91	85.426	ENSMFAG00000038863	GARS	94	85.426	Macaca_fascicularis
ENSSFOG00015000573	gars	91	85.426	ENSMMUG00000004719	GARS	94	85.426	Macaca_mulatta
ENSSFOG00015000573	gars	91	79.076	ENSMNEG00000043203	GARS	94	79.076	Macaca_nemestrina
ENSSFOG00015000573	gars	91	85.570	ENSMLEG00000044430	GARS	94	85.570	Mandrillus_leucophaeus
ENSSFOG00015000573	gars	91	89.451	ENSMAMG00000001894	gars	99	89.805	Mastacembelus_armatus
ENSSFOG00015000573	gars	89	84.615	ENSMZEG00005019754	gars	100	84.615	Maylandia_zebra
ENSSFOG00015000573	gars	100	83.639	ENSMZEG00005019740	gars	95	85.910	Maylandia_zebra
ENSSFOG00015000573	gars	97	81.048	ENSMGAG00000003162	GARS	93	85.818	Meleagris_gallopavo
ENSSFOG00015000573	gars	91	85.653	ENSMAUG00000016852	Gars	95	85.653	Mesocricetus_auratus
ENSSFOG00015000573	gars	90	86.569	ENSMICG00000046006	GARS	100	86.569	Microcebus_murinus
ENSSFOG00015000573	gars	91	85.021	ENSMOCG00000017680	Gars	96	85.021	Microtus_ochrogaster
ENSSFOG00015000573	gars	100	80.104	ENSMMOG00000009695	gars	95	82.289	Mola_mola
ENSSFOG00015000573	gars	100	83.333	ENSMALG00000006592	gars	88	86.520	Monopterus_albus
ENSSFOG00015000573	gars	91	85.449	MGP_CAROLIEiJ_G0028410	Gars	96	85.449	Mus_caroli
ENSSFOG00015000573	gars	91	85.509	ENSMUSG00000029777	Gars	95	85.509	Mus_musculus
ENSSFOG00015000573	gars	91	85.366	MGP_PahariEiJ_G0022160	Gars	95	85.366	Mus_pahari
ENSSFOG00015000573	gars	91	85.509	MGP_SPRETEiJ_G0029412	Gars	99	88.636	Mus_spretus
ENSSFOG00015000573	gars	90	87.007	ENSMPUG00000005116	GARS	93	87.007	Mustela_putorius_furo
ENSSFOG00015000573	gars	91	85.983	ENSMLUG00000002043	GARS	94	85.755	Myotis_lucifugus
ENSSFOG00015000573	gars	90	86.404	ENSNGAG00000021844	Gars	94	86.404	Nannospalax_galili
ENSSFOG00015000573	gars	51	83.033	ENSNBRG00000018643	gars	100	83.033	Neolamprologus_brichardi
ENSSFOG00015000573	gars	100	83.901	ENSNBRG00000018585	gars	95	86.047	Neolamprologus_brichardi
ENSSFOG00015000573	gars	90	86.569	ENSNLEG00000015152	GARS	93	86.569	Nomascus_leucogenys
ENSSFOG00015000573	gars	87	78.614	ENSMEUG00000001741	GARS	100	78.614	Notamacropus_eugenii
ENSSFOG00015000573	gars	85	85.714	ENSOPRG00000005342	GARS	80	87.218	Ochotona_princeps
ENSSFOG00015000573	gars	90	85.072	ENSODEG00000008246	GARS	87	85.072	Octodon_degus
ENSSFOG00015000573	gars	89	80.792	ENSOANG00000006262	GARS	92	80.792	Ornithorhynchus_anatinus
ENSSFOG00015000573	gars	89	86.156	ENSOCUG00000005295	GARS	99	86.156	Oryctolagus_cuniculus
ENSSFOG00015000573	gars	100	82.245	ENSORLG00000009470	gars	91	89.067	Oryzias_latipes
ENSSFOG00015000573	gars	95	83.564	ENSORLG00020013036	gars	100	87.186	Oryzias_latipes_hni
ENSSFOG00015000573	gars	100	82.853	ENSORLG00015012886	gars	92	89.535	Oryzias_latipes_hsok
ENSSFOG00015000573	gars	52	79.293	ENSOMEG00000000133	gars	100	79.949	Oryzias_melastigma
ENSSFOG00015000573	gars	96	81.929	ENSOGAG00000013321	GARS	97	82.065	Otolemur_garnettii
ENSSFOG00015000573	gars	90	85.401	ENSOARG00000008017	GARS	93	85.401	Ovis_aries
ENSSFOG00015000573	gars	90	86.861	ENSPPAG00000037266	GARS	93	86.861	Pan_paniscus
ENSSFOG00015000573	gars	90	86.569	ENSPPRG00000001917	GARS	93	86.569	Panthera_pardus
ENSSFOG00015000573	gars	89	86.892	ENSPTIG00000016096	GARS	99	86.892	Panthera_tigris_altaica
ENSSFOG00015000573	gars	90	86.861	ENSPTRG00000019042	GARS	93	86.861	Pan_troglodytes
ENSSFOG00015000573	gars	91	85.570	ENSPANG00000026231	GARS	94	85.570	Papio_anubis
ENSSFOG00015000573	gars	99	84.888	ENSPKIG00000014863	gars	92	86.694	Paramormyrops_kingsleyae
ENSSFOG00015000573	gars	87	87.838	ENSPSIG00000010935	GARS	99	88.312	Pelodiscus_sinensis
ENSSFOG00015000573	gars	51	80.711	ENSPMGG00000023648	gars	99	80.711	Periophthalmus_magnuspinnatus
ENSSFOG00015000573	gars	99	80.000	ENSPMGG00000023644	gars	94	82.401	Periophthalmus_magnuspinnatus
ENSSFOG00015000573	gars	87	86.917	ENSPEMG00000019930	Gars	100	86.917	Peromyscus_maniculatus_bairdii
ENSSFOG00015000573	gars	89	77.745	ENSPMAG00000006586	gars	98	77.745	Petromyzon_marinus
ENSSFOG00015000573	gars	90	82.994	ENSPCIG00000017010	GARS	90	82.994	Phascolarctos_cinereus
ENSSFOG00015000573	gars	100	84.595	ENSPFOG00000004593	gars	95	87.415	Poecilia_formosa
ENSSFOG00015000573	gars	100	84.856	ENSPLAG00000008038	gars	95	87.312	Poecilia_latipinna
ENSSFOG00015000573	gars	100	84.465	ENSPMEG00000005901	gars	95	87.278	Poecilia_mexicana
ENSSFOG00015000573	gars	99	84.777	ENSPREG00000020960	gars	90	90.818	Poecilia_reticulata
ENSSFOG00015000573	gars	90	85.547	ENSPPYG00000017673	GARS	93	85.547	Pongo_abelii
ENSSFOG00015000573	gars	90	84.964	ENSPCAG00000007199	GARS	92	84.738	Procavia_capensis
ENSSFOG00015000573	gars	90	83.066	ENSPCOG00000008887	GARS	92	83.066	Propithecus_coquereli
ENSSFOG00015000573	gars	90	86.861	ENSPVAG00000013565	GARS	93	86.861	Pteropus_vampyrus
ENSSFOG00015000573	gars	100	82.984	ENSPNYG00000005017	gars	95	85.089	Pundamilia_nyererei
ENSSFOG00015000573	gars	89	83.776	ENSPNYG00000004960	gars	99	83.776	Pundamilia_nyererei
ENSSFOG00015000573	gars	91	87.608	ENSPNAG00000020164	gars	93	87.608	Pygocentrus_nattereri
ENSSFOG00015000573	gars	91	85.222	ENSRNOG00000011052	Gars	96	85.222	Rattus_norvegicus
ENSSFOG00015000573	gars	91	82.540	ENSRBIG00000040287	GARS	94	82.540	Rhinopithecus_bieti
ENSSFOG00015000573	gars	91	85.137	ENSRROG00000044600	GARS	94	85.137	Rhinopithecus_roxellana
ENSSFOG00015000573	gars	79	47.956	YBR121C	GRS1	95	48.585	Saccharomyces_cerevisiae
ENSSFOG00015000573	gars	76	49.744	YPR081C	-	94	49.744	Saccharomyces_cerevisiae
ENSSFOG00015000573	gars	90	85.839	ENSSBOG00000022287	GARS	93	85.839	Saimiri_boliviensis_boliviensis
ENSSFOG00015000573	gars	90	78.374	ENSSHAG00000003419	GARS	99	78.374	Sarcophilus_harrisii
ENSSFOG00015000573	gars	100	84.424	ENSSMAG00000013672	gars	92	90.407	Scophthalmus_maximus
ENSSFOG00015000573	gars	88	84.741	ENSSMAG00000013709	gars	99	84.741	Scophthalmus_maximus
ENSSFOG00015000573	gars	89	74.041	ENSSDUG00000016758	gars	100	74.041	Seriola_dumerili
ENSSFOG00015000573	gars	100	84.293	ENSSDUG00000016795	gars	92	90.552	Seriola_dumerili
ENSSFOG00015000573	gars	100	84.293	ENSSLDG00000014279	gars	92	90.552	Seriola_lalandi_dorsalis
ENSSFOG00015000573	gars	89	85.355	ENSSLDG00000014238	gars	100	85.355	Seriola_lalandi_dorsalis
ENSSFOG00015000573	gars	67	77.323	ENSSARG00000008410	GARS	82	77.323	Sorex_araneus
ENSSFOG00015000573	gars	89	86.950	ENSSPUG00000001815	-	93	86.127	Sphenodon_punctatus
ENSSFOG00015000573	gars	100	79.112	ENSSPAG00000012003	gars	91	84.738	Stegastes_partitus
ENSSFOG00015000573	gars	90	86.423	ENSSSCG00000016677	GARS	92	86.423	Sus_scrofa
ENSSFOG00015000573	gars	87	84.328	ENSTGUG00000000364	GARS	100	84.328	Taeniopygia_guttata
ENSSFOG00015000573	gars	100	83.159	ENSTRUG00000017557	gars	96	84.783	Takifugu_rubripes
ENSSFOG00015000573	gars	95	85.282	ENSTNIG00000012738	gars	99	85.144	Tetraodon_nigroviridis
ENSSFOG00015000573	gars	84	79.624	ENSTBEG00000008972	GARS	86	79.624	Tupaia_belangeri
ENSSFOG00015000573	gars	87	85.542	ENSTTRG00000000334	GARS	99	85.542	Tursiops_truncatus
ENSSFOG00015000573	gars	90	87.153	ENSUAMG00000016756	GARS	93	87.153	Ursus_americanus
ENSSFOG00015000573	gars	88	86.377	ENSUMAG00000002158	GARS	100	87.662	Ursus_maritimus
ENSSFOG00015000573	gars	90	79.416	ENSVPAG00000009438	GARS	94	79.416	Vicugna_pacos
ENSSFOG00015000573	gars	90	86.988	ENSVVUG00000020981	GARS	88	86.483	Vulpes_vulpes
ENSSFOG00015000573	gars	89	84.928	ENSXETG00000018474	gars	92	84.928	Xenopus_tropicalis
ENSSFOG00015000573	gars	99	83.922	ENSXCOG00000010005	gars	98	85.445	Xiphophorus_couchianus
ENSSFOG00015000573	gars	99	85.059	ENSXMAG00000009402	gars	96	86.856	Xiphophorus_maculatus