EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015000763 (Gene tree)
Gene ID: 108931978
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: tRNA-splicing ligase RtcB homolog
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 10081 bases
Position: chrKV410976.1:60096-70176
Accession: 108931978
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015001105	RtcB	PF01139.17	1.6e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015001136	-	1518	XM_018748099	ENSSFOP00015001105	505 (aa)	XP_018603615	A0A1W4ZS82

Gene Model

Click here to download ENSSFOG00015000763's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015000763's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015000763	rtcb	100	94.257	ENSSFOG00015011572	RTCB	100	94.257

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015000763	rtcb	100	93.069	ENSG00000100220	RTCB	100	93.069	Homo_sapiens
ENSSFOG00015000763	rtcb	100	96.436	ENSAPOG00000006040	rtcb	100	96.436	Acanthochromis_polyacanthus
ENSSFOG00015000763	rtcb	100	93.069	ENSAMEG00000016152	RTCB	100	93.069	Ailuropoda_melanoleuca
ENSSFOG00015000763	rtcb	100	91.485	ENSACIG00000009083	rtcb	100	91.485	Amphilophus_citrinellus
ENSSFOG00015000763	rtcb	100	96.238	ENSAOCG00000005662	rtcb	100	97.826	Amphiprion_ocellaris
ENSSFOG00015000763	rtcb	100	96.238	ENSAPEG00000024701	rtcb	100	96.238	Amphiprion_percula
ENSSFOG00015000763	rtcb	96	91.376	ENSAPEG00000024653	rtcb	100	91.376	Amphiprion_percula
ENSSFOG00015000763	rtcb	100	95.050	ENSATEG00000000618	rtcb	100	95.050	Anabas_testudineus
ENSSFOG00015000763	rtcb	100	89.981	ENSACAG00000014817	RTCB	100	89.981	Anolis_carolinensis
ENSSFOG00015000763	rtcb	100	78.614	ENSANAG00000018191	-	91	78.614	Aotus_nancymaae
ENSSFOG00015000763	rtcb	72	94.444	ENSANAG00000023724	-	84	94.444	Aotus_nancymaae
ENSSFOG00015000763	rtcb	100	94.851	ENSACLG00000008367	rtcb	100	96.522	Astatotilapia_calliptera
ENSSFOG00015000763	rtcb	100	95.248	ENSAMXG00000042320	rtcb	100	95.248	Astyanax_mexicanus
ENSSFOG00015000763	rtcb	100	92.871	ENSBTAG00000011070	RTCB	100	92.871	Bos_taurus
ENSSFOG00015000763	rtcb	100	74.653	WBGene00008877	rtcb-1	100	74.653	Caenorhabditis_elegans
ENSSFOG00015000763	rtcb	100	93.069	ENSCJAG00000006128	RTCB	100	93.069	Callithrix_jacchus
ENSSFOG00015000763	rtcb	100	88.911	ENSCAFG00000010789	-	100	88.911	Canis_familiaris
ENSSFOG00015000763	rtcb	100	93.069	ENSCAFG00000001785	RTCB	100	93.069	Canis_familiaris
ENSSFOG00015000763	rtcb	87	89.091	ENSCAFG00020018953	-	99	89.091	Canis_lupus_dingo
ENSSFOG00015000763	rtcb	100	93.069	ENSCAFG00020004890	-	100	93.069	Canis_lupus_dingo
ENSSFOG00015000763	rtcb	100	93.069	ENSCHIG00000027009	-	100	93.069	Capra_hircus
ENSSFOG00015000763	rtcb	100	93.069	ENSTSYG00000012320	RTCB	100	93.069	Carlito_syrichta
ENSSFOG00015000763	rtcb	94	93.082	ENSCAPG00000011647	RTCB	96	93.082	Cavia_aperea
ENSSFOG00015000763	rtcb	100	93.069	ENSCCAG00000000618	RTCB	100	93.069	Cebus_capucinus
ENSSFOG00015000763	rtcb	100	92.673	ENSCATG00000033424	RTCB	100	92.673	Cercocebus_atys
ENSSFOG00015000763	rtcb	100	92.871	ENSCLAG00000007997	RTCB	100	92.871	Chinchilla_lanigera
ENSSFOG00015000763	rtcb	100	92.673	ENSCSAG00000008351	RTCB	100	92.673	Chlorocebus_sabaeus
ENSSFOG00015000763	rtcb	100	79.208	ENSCHOG00000009123	RTCB	100	79.208	Choloepus_hoffmanni
ENSSFOG00015000763	rtcb	100	92.475	ENSCPBG00000023184	RTCB	100	92.475	Chrysemys_picta_bellii
ENSSFOG00015000763	rtcb	100	82.376	ENSCING00000003830	-	100	82.376	Ciona_intestinalis
ENSSFOG00015000763	rtcb	100	82.970	ENSCSAVG00000008124	-	100	82.005	Ciona_savignyi
ENSSFOG00015000763	rtcb	100	89.109	ENSCANG00000001891	RTCB	100	89.109	Colobus_angolensis_palliatus
ENSSFOG00015000763	rtcb	100	93.069	ENSCGRG00001011173	Rtcb	100	93.069	Cricetulus_griseus_chok1gshd
ENSSFOG00015000763	rtcb	93	94.055	ENSCGRG00000009587	-	96	94.055	Cricetulus_griseus_crigri
ENSSFOG00015000763	rtcb	100	94.653	ENSCSEG00000003986	rtcb	100	94.653	Cynoglossus_semilaevis
ENSSFOG00015000763	rtcb	82	95.192	ENSCVAG00000000569	rtcb	95	95.192	Cyprinodon_variegatus
ENSSFOG00015000763	rtcb	100	96.040	ENSDARG00000101047	rtcb	100	96.040	Danio_rerio
ENSSFOG00015000763	rtcb	80	88.943	ENSDNOG00000012425	RTCB	99	88.943	Dasypus_novemcinctus
ENSSFOG00015000763	rtcb	100	92.871	ENSDORG00000010855	Rtcb	100	92.871	Dipodomys_ordii
ENSSFOG00015000763	rtcb	99	84.095	FBgn0032781	RtcB	99	84.095	Drosophila_melanogaster
ENSSFOG00015000763	rtcb	100	87.327	ENSETEG00000001988	RTCB	100	87.327	Echinops_telfairi
ENSSFOG00015000763	rtcb	100	85.743	ENSEBUG00000014235	rtcb	100	85.743	Eptatretus_burgeri
ENSSFOG00015000763	rtcb	100	93.267	ENSEASG00005019059	RTCB	100	93.267	Equus_asinus_asinus
ENSSFOG00015000763	rtcb	100	93.267	ENSECAG00000023998	RTCB	100	93.267	Equus_caballus
ENSSFOG00015000763	rtcb	88	84.978	ENSEEUG00000006251	RTCB	99	84.978	Erinaceus_europaeus
ENSSFOG00015000763	rtcb	100	82.420	ENSELUG00000009275	rtcb	100	82.420	Esox_lucius
ENSSFOG00015000763	rtcb	100	93.069	ENSFCAG00000026480	RTCB	100	93.069	Felis_catus
ENSSFOG00015000763	rtcb	100	92.871	ENSFALG00000013334	RTCB	100	92.871	Ficedula_albicollis
ENSSFOG00015000763	rtcb	100	92.871	ENSFDAG00000018150	RTCB	100	92.871	Fukomys_damarensis
ENSSFOG00015000763	rtcb	100	94.851	ENSFHEG00000009595	rtcb	100	94.851	Fundulus_heteroclitus
ENSSFOG00015000763	rtcb	100	92.079	ENSGMOG00000018882	rtcb	100	92.079	Gadus_morhua
ENSSFOG00015000763	rtcb	100	92.673	ENSGALG00000012611	RTCB	100	92.673	Gallus_gallus
ENSSFOG00015000763	rtcb	100	94.851	ENSGAFG00000004198	rtcb	100	94.851	Gambusia_affinis
ENSSFOG00015000763	rtcb	100	95.050	ENSGACG00000000586	rtcb	100	95.050	Gasterosteus_aculeatus
ENSSFOG00015000763	rtcb	93	92.340	ENSGAGG00000019133	RTCB	98	92.340	Gopherus_agassizii
ENSSFOG00015000763	rtcb	100	93.069	ENSGGOG00000011402	RTCB	100	93.069	Gorilla_gorilla
ENSSFOG00015000763	rtcb	100	94.851	ENSHBUG00000020571	rtcb	100	94.851	Haplochromis_burtoni
ENSSFOG00015000763	rtcb	93	66.737	ENSHGLG00000001066	-	99	66.737	Heterocephalus_glaber_female
ENSSFOG00015000763	rtcb	100	92.871	ENSHGLG00000004492	RTCB	100	92.871	Heterocephalus_glaber_female
ENSSFOG00015000763	rtcb	100	92.871	ENSHGLG00100008965	RTCB	100	92.871	Heterocephalus_glaber_male
ENSSFOG00015000763	rtcb	100	93.688	ENSHCOG00000006450	rtcb	100	93.688	Hippocampus_comes
ENSSFOG00015000763	rtcb	100	94.653	ENSIPUG00000015443	rtcb	100	94.653	Ictalurus_punctatus
ENSSFOG00015000763	rtcb	100	93.069	ENSSTOG00000003878	RTCB	100	93.069	Ictidomys_tridecemlineatus
ENSSFOG00015000763	rtcb	100	93.069	ENSJJAG00000010667	Rtcb	100	93.069	Jaculus_jaculus
ENSSFOG00015000763	rtcb	100	95.446	ENSKMAG00000013178	rtcb	100	95.446	Kryptolebias_marmoratus
ENSSFOG00015000763	rtcb	100	95.446	ENSLBEG00000010566	RTCB	100	95.446	Labrus_bergylta
ENSSFOG00015000763	rtcb	100	94.257	ENSLBEG00000000214	rtcb	100	94.257	Labrus_bergylta
ENSSFOG00015000763	rtcb	100	93.267	ENSLACG00000013033	RTCB	100	93.267	Latimeria_chalumnae
ENSSFOG00015000763	rtcb	100	95.644	ENSLOCG00000016515	rtcb	99	95.644	Lepisosteus_oculatus
ENSSFOG00015000763	rtcb	100	92.673	ENSLAFG00000002082	RTCB	100	92.673	Loxodonta_africana
ENSSFOG00015000763	rtcb	100	92.673	ENSMFAG00000034419	RTCB	100	92.673	Macaca_fascicularis
ENSSFOG00015000763	rtcb	100	92.673	ENSMMUG00000006720	RTCB	100	92.673	Macaca_mulatta
ENSSFOG00015000763	rtcb	100	92.673	ENSMNEG00000040669	RTCB	100	92.673	Macaca_nemestrina
ENSSFOG00015000763	rtcb	100	92.673	ENSMLEG00000040505	RTCB	100	92.673	Mandrillus_leucophaeus
ENSSFOG00015000763	rtcb	100	95.050	ENSMAMG00000020676	rtcb	100	95.050	Mastacembelus_armatus
ENSSFOG00015000763	rtcb	100	94.851	ENSMZEG00005018942	rtcb	100	94.851	Maylandia_zebra
ENSSFOG00015000763	rtcb	100	92.308	ENSMGAG00000012805	RTCB	100	92.308	Meleagris_gallopavo
ENSSFOG00015000763	rtcb	60	98.230	ENSMAUG00000008301	Rtcb	100	98.230	Mesocricetus_auratus
ENSSFOG00015000763	rtcb	100	93.069	ENSMICG00000013303	-	100	93.069	Microcebus_murinus
ENSSFOG00015000763	rtcb	100	73.861	ENSMICG00000036677	-	100	73.861	Microcebus_murinus
ENSSFOG00015000763	rtcb	100	93.465	ENSMOCG00000002440	Rtcb	100	93.465	Microtus_ochrogaster
ENSSFOG00015000763	rtcb	100	96.040	ENSMMOG00000005987	rtcb	100	96.040	Mola_mola
ENSSFOG00015000763	rtcb	100	92.871	ENSMODG00000001414	RTCB	100	92.871	Monodelphis_domestica
ENSSFOG00015000763	rtcb	100	95.446	ENSMALG00000007603	rtcb	100	95.446	Monopterus_albus
ENSSFOG00015000763	rtcb	100	93.267	MGP_CAROLIEiJ_G0015689	Rtcb	100	93.267	Mus_caroli
ENSSFOG00015000763	rtcb	100	93.267	ENSMUSG00000001783	Rtcb	100	93.267	Mus_musculus
ENSSFOG00015000763	rtcb	100	93.267	MGP_PahariEiJ_G0031396	Rtcb	100	93.267	Mus_pahari
ENSSFOG00015000763	rtcb	100	93.267	MGP_SPRETEiJ_G0016507	Rtcb	100	93.267	Mus_spretus
ENSSFOG00015000763	rtcb	100	93.069	ENSMPUG00000012285	RTCB	100	93.069	Mustela_putorius_furo
ENSSFOG00015000763	rtcb	100	90.533	ENSMLUG00000007803	RTCB	100	90.533	Myotis_lucifugus
ENSSFOG00015000763	rtcb	75	97.333	ENSNGAG00000005093	Rtcb	100	97.333	Nannospalax_galili
ENSSFOG00015000763	rtcb	100	95.050	ENSNBRG00000017202	rtcb	100	95.050	Neolamprologus_brichardi
ENSSFOG00015000763	rtcb	100	93.069	ENSNLEG00000004960	RTCB	100	93.069	Nomascus_leucogenys
ENSSFOG00015000763	rtcb	100	69.703	ENSMEUG00000007809	-	100	69.703	Notamacropus_eugenii
ENSSFOG00015000763	rtcb	73	97.500	ENSOPRG00000003488	RTCB	79	97.500	Ochotona_princeps
ENSSFOG00015000763	rtcb	82	98.113	ENSODEG00000013033	-	100	98.113	Octodon_degus
ENSSFOG00015000763	rtcb	100	61.782	ENSODEG00000005042	-	100	61.782	Octodon_degus
ENSSFOG00015000763	rtcb	100	95.842	ENSONIG00000007474	rtcb	100	95.842	Oreochromis_niloticus
ENSSFOG00015000763	rtcb	100	92.673	ENSOANG00000005524	RTCB	100	92.673	Ornithorhynchus_anatinus
ENSSFOG00015000763	rtcb	93	92.553	ENSOCUG00000008270	RTCB	96	92.553	Oryctolagus_cuniculus
ENSSFOG00015000763	rtcb	100	95.446	ENSORLG00000020093	rtcb	100	95.446	Oryzias_latipes
ENSSFOG00015000763	rtcb	100	95.446	ENSORLG00020003706	rtcb	99	96.632	Oryzias_latipes_hni
ENSSFOG00015000763	rtcb	100	95.644	ENSORLG00015002968	rtcb	100	95.644	Oryzias_latipes_hsok
ENSSFOG00015000763	rtcb	100	95.050	ENSOMEG00000021278	rtcb	100	95.050	Oryzias_melastigma
ENSSFOG00015000763	rtcb	100	92.871	ENSOGAG00000001425	RTCB	100	92.871	Otolemur_garnettii
ENSSFOG00015000763	rtcb	100	93.069	ENSOARG00000018008	RTCB	100	93.069	Ovis_aries
ENSSFOG00015000763	rtcb	100	93.069	ENSPPAG00000028667	RTCB	100	93.069	Pan_paniscus
ENSSFOG00015000763	rtcb	100	93.069	ENSPPRG00000004038	RTCB	100	93.069	Panthera_pardus
ENSSFOG00015000763	rtcb	94	89.263	ENSPTIG00000020499	RTCB	97	90.316	Panthera_tigris_altaica
ENSSFOG00015000763	rtcb	100	93.069	ENSPTRG00000014287	RTCB	100	93.069	Pan_troglodytes
ENSSFOG00015000763	rtcb	100	92.673	ENSPANG00000016035	RTCB	100	92.673	Papio_anubis
ENSSFOG00015000763	rtcb	100	95.248	ENSPKIG00000001881	rtcb	100	95.248	Paramormyrops_kingsleyae
ENSSFOG00015000763	rtcb	91	93.478	ENSPSIG00000011690	RTCB	100	93.478	Pelodiscus_sinensis
ENSSFOG00015000763	rtcb	100	94.653	ENSPMGG00000016672	rtcb	100	94.653	Periophthalmus_magnuspinnatus
ENSSFOG00015000763	rtcb	100	93.267	ENSPEMG00000019548	Rtcb	100	93.267	Peromyscus_maniculatus_bairdii
ENSSFOG00015000763	rtcb	100	89.901	ENSPMAG00000005657	rtcb	100	89.901	Petromyzon_marinus
ENSSFOG00015000763	rtcb	100	92.871	ENSPCIG00000009467	RTCB	100	92.871	Phascolarctos_cinereus
ENSSFOG00015000763	rtcb	100	95.248	ENSPFOG00000003058	rtcb	100	95.248	Poecilia_formosa
ENSSFOG00015000763	rtcb	100	95.446	ENSPLAG00000017663	rtcb	100	95.446	Poecilia_latipinna
ENSSFOG00015000763	rtcb	100	95.248	ENSPMEG00000006227	rtcb	100	95.248	Poecilia_mexicana
ENSSFOG00015000763	rtcb	100	95.446	ENSPREG00000018467	rtcb	100	95.446	Poecilia_reticulata
ENSSFOG00015000763	rtcb	100	93.069	ENSPPYG00000011752	RTCB	100	93.069	Pongo_abelii
ENSSFOG00015000763	rtcb	93	76.907	ENSPCAG00000013641	RTCB	100	76.907	Procavia_capensis
ENSSFOG00015000763	rtcb	100	92.871	ENSPCOG00000017243	RTCB	100	92.871	Propithecus_coquereli
ENSSFOG00015000763	rtcb	93	92.340	ENSPVAG00000002380	RTCB	100	92.340	Pteropus_vampyrus
ENSSFOG00015000763	rtcb	100	94.851	ENSPNYG00000022760	rtcb	100	94.851	Pundamilia_nyererei
ENSSFOG00015000763	rtcb	100	95.446	ENSPNAG00000009209	rtcb	100	95.446	Pygocentrus_nattereri
ENSSFOG00015000763	rtcb	100	93.267	ENSRNOG00000004813	Rtcb	100	93.267	Rattus_norvegicus
ENSSFOG00015000763	rtcb	100	84.585	ENSRBIG00000042090	RTCB	100	84.585	Rhinopithecus_bieti
ENSSFOG00015000763	rtcb	100	88.317	ENSSBOG00000020085	-	100	88.317	Saimiri_boliviensis_boliviensis
ENSSFOG00015000763	rtcb	94	94.093	ENSSHAG00000016277	RTCB	100	94.093	Sarcophilus_harrisii
ENSSFOG00015000763	rtcb	100	92.871	ENSSMAG00000005096	rtcb	100	92.871	Scophthalmus_maximus
ENSSFOG00015000763	rtcb	100	94.257	ENSSDUG00000012605	rtcb	100	94.257	Seriola_dumerili
ENSSFOG00015000763	rtcb	100	94.257	ENSSLDG00000019458	rtcb	100	94.257	Seriola_lalandi_dorsalis
ENSSFOG00015000763	rtcb	66	97.143	ENSSARG00000004799	-	70	97.143	Sorex_araneus
ENSSFOG00015000763	rtcb	100	92.079	ENSSPUG00000012814	RTCB	100	92.079	Sphenodon_punctatus
ENSSFOG00015000763	rtcb	100	96.238	ENSSPAG00000004623	rtcb	100	96.238	Stegastes_partitus
ENSSFOG00015000763	rtcb	100	93.069	ENSSSCG00000000158	RTCB	100	93.069	Sus_scrofa
ENSSFOG00015000763	rtcb	100	92.871	ENSTGUG00000010947	RTCB	99	92.871	Taeniopygia_guttata
ENSSFOG00015000763	rtcb	91	98.043	ENSTRUG00000009880	rtcb	100	98.043	Takifugu_rubripes
ENSSFOG00015000763	rtcb	100	94.653	ENSTNIG00000002484	rtcb	100	94.653	Tetraodon_nigroviridis
ENSSFOG00015000763	rtcb	100	80.198	ENSTBEG00000004418	RTCB	100	80.198	Tupaia_belangeri
ENSSFOG00015000763	rtcb	93	92.128	ENSTTRG00000006417	RTCB	100	92.128	Tursiops_truncatus
ENSSFOG00015000763	rtcb	100	93.069	ENSUAMG00000022792	RTCB	100	93.069	Ursus_americanus
ENSSFOG00015000763	rtcb	100	93.069	ENSUMAG00000017225	RTCB	100	93.069	Ursus_maritimus
ENSSFOG00015000763	rtcb	100	92.871	ENSVPAG00000005375	RTCB	100	92.871	Vicugna_pacos
ENSSFOG00015000763	rtcb	100	93.069	ENSVVUG00000023408	RTCB	100	94.103	Vulpes_vulpes
ENSSFOG00015000763	rtcb	100	93.069	ENSXETG00000011523	rtcb	100	93.069	Xenopus_tropicalis
ENSSFOG00015000763	rtcb	100	95.050	ENSXMAG00000002855	rtcb	100	95.050	Xiphophorus_maculatus