EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015000766 (Gene tree)
Gene ID: 108928605
Gene Symbol: sfswap
Alias: sfrs8|srsf8|zgc:56184
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 17152 bases
Position: chrKV410891.1:89471-106622
Accession: 108928605
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015001020	DRY_EERY	PF09750.9	1.4e-26	1	1
ENSSFOP00015001036	DRY_EERY	PF09750.9	1.4e-26	1	1
ENSSFOP00015001020	Surp	PF01805.20	1.3e-28	1	2
ENSSFOP00015001020	Surp	PF01805.20	1.3e-28	2	2
ENSSFOP00015001036	Surp	PF01805.20	1.4e-28	1	2
ENSSFOP00015001036	Surp	PF01805.20	1.4e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015001051	-	5537	XM_018742598	ENSSFOP00015001020	932 (aa)	XP_018598114	-
ENSSFOT00015001067	-	4656	-	ENSSFOP00015001036	948 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015000766's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015000766's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015000766	sfswap	97	58.577	ENSG00000061936	SFSWAP	96	56.567	Homo_sapiens
ENSSFOG00015000766	sfswap	69	69.102	ENSAPOG00000005784	sfswap	67	76.190	Acanthochromis_polyacanthus
ENSSFOG00015000766	sfswap	97	57.203	ENSAMEG00000013818	SFSWAP	96	57.569	Ailuropoda_melanoleuca
ENSSFOG00015000766	sfswap	70	70.669	ENSAOCG00000016469	sfswap	66	69.512	Amphiprion_ocellaris
ENSSFOG00015000766	sfswap	70	70.669	ENSAPEG00000004965	sfswap	66	69.512	Amphiprion_percula
ENSSFOG00015000766	sfswap	70	69.499	ENSATEG00000021053	sfswap	69	69.347	Anabas_testudineus
ENSSFOG00015000766	sfswap	97	58.115	ENSANAG00000001518	SFSWAP	96	56.341	Aotus_nancymaae
ENSSFOG00015000766	sfswap	70	68.902	ENSACLG00000020159	sfswap	69	69.055	Astatotilapia_calliptera
ENSSFOG00015000766	sfswap	100	61.615	ENSAMXG00000008657	sfswap	97	62.767	Astyanax_mexicanus
ENSSFOG00015000766	sfswap	97	57.712	ENSBTAG00000000439	SFSWAP	96	57.247	Bos_taurus
ENSSFOG00015000766	sfswap	97	58.290	ENSCJAG00000003613	SFSWAP	96	56.386	Callithrix_jacchus
ENSSFOG00015000766	sfswap	97	57.474	ENSCAFG00000006625	SFSWAP	96	57.476	Canis_familiaris
ENSSFOG00015000766	sfswap	88	52.426	ENSCAFG00020011254	SFSWAP	99	51.861	Canis_lupus_dingo
ENSSFOG00015000766	sfswap	50	54.717	ENSCPOG00000005280	SFSWAP	96	57.098	Cavia_porcellus
ENSSFOG00015000766	sfswap	97	55.411	ENSCCAG00000037255	SFSWAP	96	56.580	Cebus_capucinus
ENSSFOG00015000766	sfswap	97	57.293	ENSCATG00000031094	SFSWAP	96	56.861	Cercocebus_atys
ENSSFOG00015000766	sfswap	97	57.305	ENSCLAG00000008380	SFSWAP	96	57.293	Chinchilla_lanigera
ENSSFOG00015000766	sfswap	89	61.354	ENSCHOG00000003578	SFSWAP	87	67.188	Choloepus_hoffmanni
ENSSFOG00015000766	sfswap	97	54.289	ENSCPBG00000024757	SFSWAP	95	58.021	Chrysemys_picta_bellii
ENSSFOG00015000766	sfswap	70	67.117	ENSCSEG00000003773	sfswap	67	66.817	Cynoglossus_semilaevis
ENSSFOG00015000766	sfswap	99	59.553	ENSDARG00000005980	sfswap	97	61.411	Danio_rerio
ENSSFOG00015000766	sfswap	81	57.444	ENSDNOG00000018742	SFSWAP	100	53.133	Dasypus_novemcinctus
ENSSFOG00015000766	sfswap	77	80.263	ENSETEG00000016657	-	83	50.102	Echinops_telfairi
ENSSFOG00015000766	sfswap	85	37.554	ENSEBUG00000016748	SFSWAP	72	39.013	Eptatretus_burgeri
ENSSFOG00015000766	sfswap	97	58.639	ENSEASG00005016502	SFSWAP	96	57.203	Equus_asinus_asinus
ENSSFOG00015000766	sfswap	95	57.495	ENSECAG00000007657	SFSWAP	95	56.350	Equus_caballus
ENSSFOG00015000766	sfswap	81	55.860	ENSEEUG00000001713	SFSWAP	70	49.916	Erinaceus_europaeus
ENSSFOG00015000766	sfswap	100	58.651	ENSELUG00000010942	sfswap	97	61.162	Esox_lucius
ENSSFOG00015000766	sfswap	97	59.015	ENSFCAG00000010778	SFSWAP	96	58.307	Felis_catus
ENSSFOG00015000766	sfswap	97	56.164	ENSFALG00000009577	SFSWAP	95	57.262	Ficedula_albicollis
ENSSFOG00015000766	sfswap	97	59.688	ENSFDAG00000017235	SFSWAP	96	57.878	Fukomys_damarensis
ENSSFOG00015000766	sfswap	71	65.588	ENSGAFG00000006272	sfswap	70	66.667	Gambusia_affinis
ENSSFOG00015000766	sfswap	74	76.190	ENSGACG00000017647	sfswap	71	63.663	Gasterosteus_aculeatus
ENSSFOG00015000766	sfswap	97	51.515	ENSGAGG00000002611	SFSWAP	67	60.895	Gopherus_agassizii
ENSSFOG00015000766	sfswap	70	68.493	ENSHBUG00000005629	sfswap	68	68.645	Haplochromis_burtoni
ENSSFOG00015000766	sfswap	50	56.298	ENSHGLG00000019216	SFSWAP	96	57.497	Heterocephalus_glaber_female
ENSSFOG00015000766	sfswap	50	55.810	ENSHGLG00100019350	SFSWAP	96	57.497	Heterocephalus_glaber_male
ENSSFOG00015000766	sfswap	69	66.365	ENSHCOG00000009475	sfswap	67	65.913	Hippocampus_comes
ENSSFOG00015000766	sfswap	96	62.039	ENSIPUG00000010598	sfswap	96	63.518	Ictalurus_punctatus
ENSSFOG00015000766	sfswap	97	57.652	ENSSTOG00000000773	SFSWAP	96	57.188	Ictidomys_tridecemlineatus
ENSSFOG00015000766	sfswap	99	55.368	ENSJJAG00000006609	Sfswap	96	55.613	Jaculus_jaculus
ENSSFOG00015000766	sfswap	69	65.809	ENSKMAG00000013168	sfswap	66	64.873	Kryptolebias_marmoratus
ENSSFOG00015000766	sfswap	69	66.971	ENSLBEG00000010239	sfswap	70	66.565	Labrus_bergylta
ENSSFOG00015000766	sfswap	72	58.179	ENSLACG00000018678	SFSWAP	69	56.857	Latimeria_chalumnae
ENSSFOG00015000766	sfswap	100	59.018	ENSLOCG00000006202	sfswap	69	65.896	Lepisosteus_oculatus
ENSSFOG00015000766	sfswap	95	57.433	ENSMFAG00000037352	SFSWAP	81	56.416	Macaca_fascicularis
ENSSFOG00015000766	sfswap	97	58.559	ENSMMUG00000020343	SFSWAP	96	56.950	Macaca_mulatta
ENSSFOG00015000766	sfswap	97	58.559	ENSMNEG00000041002	SFSWAP	96	56.950	Macaca_nemestrina
ENSSFOG00015000766	sfswap	73	67.914	ENSMAMG00000006631	sfswap	96	59.852	Mastacembelus_armatus
ENSSFOG00015000766	sfswap	70	68.902	ENSMZEG00005017834	SFSWAP	66	69.055	Maylandia_zebra
ENSSFOG00015000766	sfswap	97	55.304	ENSMOCG00000014390	Sfswap	96	56.670	Microtus_ochrogaster
ENSSFOG00015000766	sfswap	88	59.726	ENSMODG00000015581	SFSWAP	93	52.593	Monodelphis_domestica
ENSSFOG00015000766	sfswap	97	57.773	ENSMPUG00000002218	SFSWAP	96	57.778	Mustela_putorius_furo
ENSSFOG00015000766	sfswap	86	52.626	ENSMLUG00000011296	SFSWAP	73	61.460	Myotis_lucifugus
ENSSFOG00015000766	sfswap	97	59.811	ENSNGAG00000018167	Sfswap	96	57.232	Nannospalax_galili
ENSSFOG00015000766	sfswap	67	67.823	ENSNBRG00000020857	sfswap	67	68.362	Neolamprologus_brichardi
ENSSFOG00015000766	sfswap	97	56.172	ENSNLEG00000008386	SFSWAP	96	55.848	Nomascus_leucogenys
ENSSFOG00015000766	sfswap	67	82.353	ENSMEUG00000009556	-	70	83.019	Notamacropus_eugenii
ENSSFOG00015000766	sfswap	85	62.500	ENSOPRG00000006983	-	75	62.338	Ochotona_princeps
ENSSFOG00015000766	sfswap	50	55.854	ENSODEG00000008020	SFSWAP	96	57.712	Octodon_degus
ENSSFOG00015000766	sfswap	85	67.111	ENSONIG00000003757	sfswap	75	68.195	Oreochromis_niloticus
ENSSFOG00015000766	sfswap	70	67.071	ENSORLG00000010983	sfswap	67	67.069	Oryzias_latipes
ENSSFOG00015000766	sfswap	70	66.161	ENSORLG00020010779	sfswap	67	66.616	Oryzias_latipes_hni
ENSSFOG00015000766	sfswap	70	67.527	ENSORLG00015023093	sfswap	67	66.465	Oryzias_latipes_hsok
ENSSFOG00015000766	sfswap	70	68.196	ENSOMEG00000022065	sfswap	67	68.817	Oryzias_melastigma
ENSSFOG00015000766	sfswap	97	55.920	ENSPPRG00000017318	SFSWAP	66	62.591	Panthera_pardus
ENSSFOG00015000766	sfswap	95	53.461	ENSPTIG00000004304	SFSWAP	95	53.355	Panthera_tigris_altaica
ENSSFOG00015000766	sfswap	55	69.459	ENSPTRG00000005640	SFSWAP	96	54.679	Pan_troglodytes
ENSSFOG00015000766	sfswap	97	57.293	ENSPANG00000019737	SFSWAP	96	56.861	Papio_anubis
ENSSFOG00015000766	sfswap	100	69.158	ENSPKIG00000008327	sfswap	96	70.563	Paramormyrops_kingsleyae
ENSSFOG00015000766	sfswap	85	70.091	ENSPCIG00000006062	SFSWAP	93	55.100	Phascolarctos_cinereus
ENSSFOG00015000766	sfswap	70	66.058	ENSPFOG00000019657	sfswap	68	67.071	Poecilia_formosa
ENSSFOG00015000766	sfswap	70	66.058	ENSPLAG00000008513	sfswap	68	67.071	Poecilia_latipinna
ENSSFOG00015000766	sfswap	70	66.362	ENSPMEG00000008716	sfswap	68	67.071	Poecilia_mexicana
ENSSFOG00015000766	sfswap	70	65.449	ENSPREG00000006692	sfswap	69	65.789	Poecilia_reticulata
ENSSFOG00015000766	sfswap	52	64.155	ENSPCAG00000004977	-	56	62.028	Procavia_capensis
ENSSFOG00015000766	sfswap	84	63.340	ENSPVAG00000014918	SFSWAP	79	62.525	Pteropus_vampyrus
ENSSFOG00015000766	sfswap	100	61.876	ENSPNAG00000007073	sfswap	97	62.630	Pygocentrus_nattereri
ENSSFOG00015000766	sfswap	97	56.545	ENSRNOG00000000931	Sfswap	96	57.663	Rattus_norvegicus
ENSSFOG00015000766	sfswap	97	56.350	ENSRBIG00000036330	SFSWAP	96	56.077	Rhinopithecus_bieti
ENSSFOG00015000766	sfswap	97	55.455	ENSSBOG00000026217	SFSWAP	96	56.191	Saimiri_boliviensis_boliviensis
ENSSFOG00015000766	sfswap	70	67.576	ENSSMAG00000018718	sfswap	66	67.727	Scophthalmus_maximus
ENSSFOG00015000766	sfswap	70	70.106	ENSSDUG00000021680	sfswap	71	69.909	Seriola_dumerili
ENSSFOG00015000766	sfswap	70	70.258	ENSSLDG00000010835	sfswap	70	70.909	Seriola_lalandi_dorsalis
ENSSFOG00015000766	sfswap	74	63.750	ENSSARG00000000424	SFSWAP	83	63.107	Sorex_araneus
ENSSFOG00015000766	sfswap	88	53.311	ENSSPUG00000010272	SFSWAP	69	56.271	Sphenodon_punctatus
ENSSFOG00015000766	sfswap	70	70.687	ENSSPAG00000014310	sfswap	70	72.727	Stegastes_partitus
ENSSFOG00015000766	sfswap	97	57.773	ENSSSCG00000009744	SFSWAP	96	57.203	Sus_scrofa
ENSSFOG00015000766	sfswap	97	56.590	ENSTGUG00000004623	SFSWAP	98	57.023	Taeniopygia_guttata
ENSSFOG00015000766	sfswap	87	69.730	ENSTTRG00000013478	SFSWAP	87	70.541	Tursiops_truncatus
ENSSFOG00015000766	sfswap	97	56.963	ENSUAMG00000016807	SFSWAP	96	57.631	Ursus_americanus
ENSSFOG00015000766	sfswap	84	54.676	ENSUMAG00000002957	SFSWAP	71	60.503	Ursus_maritimus
ENSSFOG00015000766	sfswap	97	57.474	ENSVVUG00000010753	SFSWAP	96	57.476	Vulpes_vulpes
ENSSFOG00015000766	sfswap	97	50.100	ENSXETG00000009350	sfswap	87	58.466	Xenopus_tropicalis
ENSSFOG00015000766	sfswap	70	66.966	ENSXMAG00000009020	sfswap	68	67.519	Xiphophorus_maculatus