EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015000839 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 15444 bases
Position: chrKV411071.1:6007923-6023366
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015001133	AF-4	PF05110.13	1e-111	1	1
ENSSFOP00015001140	AF-4	PF05110.13	1.1e-111	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015001164	-	1699	-	ENSSFOP00015001133	389 (aa)	-	-
ENSSFOT00015001171	-	1671	-	ENSSFOP00015001140	396 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015000839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015000839's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015000839	-	90	34.474	ENSSFOG00015009105	-	90	33.613

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015000839	-	100	62.035	ENSG00000072364	AFF4	85	67.969	Homo_sapiens
ENSSFOG00015000839	-	89	63.388	ENSACIG00000010592	-	98	66.575	Amphilophus_citrinellus
ENSSFOG00015000839	-	66	33.591	ENSAPLG00000016085	-	92	32.595	Anas_platyrhynchos
ENSSFOG00015000839	-	100	60.902	ENSCPOG00000001814	AFF4	99	66.116	Cavia_porcellus
ENSSFOG00015000839	-	99	35.337	ENSCPOG00000006346	AFF3	64	56.061	Cavia_porcellus
ENSSFOG00015000839	-	100	62.035	ENSCCAG00000030353	AFF4	96	63.966	Cebus_capucinus
ENSSFOG00015000839	-	99	33.990	ENSCLAG00000017100	AFF3	60	62.903	Chinchilla_lanigera
ENSSFOG00015000839	-	89	64.722	ENSCPBG00000016549	-	99	64.624	Chrysemys_picta_bellii
ENSSFOG00015000839	-	67	36.594	ENSGAGG00000003871	-	73	37.681	Gopherus_agassizii
ENSSFOG00015000839	-	90	41.361	ENSGAGG00000025416	-	98	40.838	Gopherus_agassizii
ENSSFOG00015000839	-	99	35.294	ENSSTOG00000012140	AFF3	56	61.290	Ictidomys_tridecemlineatus
ENSSFOG00015000839	-	100	62.750	ENSSTOG00000026695	AFF4	99	67.769	Ictidomys_tridecemlineatus
ENSSFOG00015000839	-	99	35.351	ENSJJAG00000013155	Aff3	60	62.903	Jaculus_jaculus
ENSSFOG00015000839	-	99	36.449	ENSLACG00000008183	-	51	40.161	Latimeria_chalumnae
ENSSFOG00015000839	-	75	34.043	ENSLACG00000003828	-	92	36.392	Latimeria_chalumnae
ENSSFOG00015000839	-	66	35.985	ENSMGAG00000014794	-	76	34.211	Meleagris_gallopavo
ENSSFOG00015000839	-	78	60.772	ENSMICG00000030374	-	88	60.952	Microcebus_murinus
ENSSFOG00015000839	-	100	63.659	MGP_CAROLIEiJ_G0016331	Aff4	99	69.421	Mus_caroli
ENSSFOG00015000839	-	100	63.409	ENSMUSG00000049470	Aff4	99	68.595	Mus_musculus
ENSSFOG00015000839	-	99	34.063	ENSMUSG00000037138	Aff3	51	58.065	Mus_musculus
ENSSFOG00015000839	-	100	63.409	MGP_PahariEiJ_G0017466	Aff4	99	68.595	Mus_pahari
ENSSFOG00015000839	-	100	63.409	MGP_SPRETEiJ_G0017175	Aff4	99	68.595	Mus_spretus
ENSSFOG00015000839	-	99	36.386	ENSMLUG00000015255	AFF3	52	61.290	Myotis_lucifugus
ENSSFOG00015000839	-	99	35.784	ENSNGAG00000002408	Aff3	51	61.290	Nannospalax_galili
ENSSFOG00015000839	-	89	62.810	ENSNBRG00000006285	-	96	65.565	Neolamprologus_brichardi
ENSSFOG00015000839	-	89	64.088	ENSPMGG00000006483	-	97	65.565	Periophthalmus_magnuspinnatus
ENSSFOG00015000839	-	99	35.122	ENSPEMG00000014802	Aff3	60	56.452	Peromyscus_maniculatus_bairdii
ENSSFOG00015000839	-	100	62.035	ENSSBOG00000021562	AFF4	96	63.966	Saimiri_boliviensis_boliviensis
ENSSFOG00015000839	-	89	34.555	ENSSDUG00000013932	-	89	32.905	Seriola_dumerili
ENSSFOG00015000839	-	91	34.190	ENSSLDG00000022289	-	90	32.576	Seriola_lalandi_dorsalis
ENSSFOG00015000839	-	89	65.574	ENSSPAG00000012349	-	97	67.751	Stegastes_partitus
ENSSFOG00015000839	-	89	59.167	ENSXCOG00000006382	-	98	61.433	Xiphophorus_couchianus