EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015000946 (Gene tree)
Gene ID: 108929146
Gene Symbol: crnkl1
Alias: zgc:55327
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 7228 bases
Position: chrKV410896.1:2652725-2659952
Accession: 108929146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015001318	HAT	PF02184.16	5.4e-35	1	2
ENSSFOP00015001318	HAT	PF02184.16	5.4e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015001352	-	3786	XM_018743500	ENSSFOP00015001318	768 (aa)	XP_018599016	A0A1W4ZEP8

Gene Model

Click here to download ENSSFOG00015000946's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015000946's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015000946	crnkl1	89	85.234	ENSG00000101343	CRNKL1	96	87.009	Homo_sapiens
ENSSFOG00015000946	crnkl1	92	88.369	ENSAPOG00000009705	crnkl1	96	90.498	Acanthochromis_polyacanthus
ENSSFOG00015000946	crnkl1	88	86.156	ENSAMEG00000000270	CRNKL1	80	87.915	Ailuropoda_melanoleuca
ENSSFOG00015000946	crnkl1	92	86.060	ENSACIG00000015267	crnkl1	88	89.744	Amphilophus_citrinellus
ENSSFOG00015000946	crnkl1	92	88.369	ENSAOCG00000021964	crnkl1	88	91.704	Amphiprion_ocellaris
ENSSFOG00015000946	crnkl1	92	88.369	ENSAPEG00000015041	crnkl1	88	91.704	Amphiprion_percula
ENSSFOG00015000946	crnkl1	93	86.676	ENSATEG00000001068	crnkl1	87	90.512	Anabas_testudineus
ENSSFOG00015000946	crnkl1	89	83.358	ENSAPLG00000013105	CRNKL1	96	84.917	Anas_platyrhynchos
ENSSFOG00015000946	crnkl1	89	86.530	ENSACAG00000005284	CRNKL1	97	87.934	Anolis_carolinensis
ENSSFOG00015000946	crnkl1	82	86.984	ENSANAG00000024889	CRNKL1	99	86.984	Aotus_nancymaae
ENSSFOG00015000946	crnkl1	94	85.892	ENSACLG00000010813	crnkl1	88	91.252	Astatotilapia_calliptera
ENSSFOG00015000946	crnkl1	97	83.849	ENSAMXG00000018334	crnkl1	89	91.704	Astyanax_mexicanus
ENSSFOG00015000946	crnkl1	89	86.257	ENSBTAG00000008472	CRNKL1	96	87.915	Bos_taurus
ENSSFOG00015000946	crnkl1	83	62.986	WBGene00019762	M03F8.3	88	63.318	Caenorhabditis_elegans
ENSSFOG00015000946	crnkl1	89	85.234	ENSCJAG00000005393	CRNKL1	96	87.009	Callithrix_jacchus
ENSSFOG00015000946	crnkl1	88	86.156	ENSCAFG00000005333	CRNKL1	91	87.915	Canis_familiaris
ENSSFOG00015000946	crnkl1	89	86.257	ENSCAFG00020027488	CRNKL1	96	87.915	Canis_lupus_dingo
ENSSFOG00015000946	crnkl1	88	86.115	ENSCHIG00000013171	CRNKL1	96	87.009	Capra_hircus
ENSSFOG00015000946	crnkl1	89	85.526	ENSTSYG00000004197	CRNKL1	96	87.160	Carlito_syrichta
ENSSFOG00015000946	crnkl1	83	83.793	ENSCAPG00000010501	CRNKL1	96	85.546	Cavia_aperea
ENSSFOG00015000946	crnkl1	89	84.795	ENSCPOG00000004418	CRNKL1	96	86.405	Cavia_porcellus
ENSSFOG00015000946	crnkl1	89	85.234	ENSCCAG00000027037	CRNKL1	96	87.009	Cebus_capucinus
ENSSFOG00015000946	crnkl1	89	85.088	ENSCATG00000034247	CRNKL1	96	86.858	Cercocebus_atys
ENSSFOG00015000946	crnkl1	89	85.526	ENSCLAG00000013859	CRNKL1	96	87.160	Chinchilla_lanigera
ENSSFOG00015000946	crnkl1	89	85.088	ENSCSAG00000011434	CRNKL1	96	86.858	Chlorocebus_sabaeus
ENSSFOG00015000946	crnkl1	88	85.420	ENSCHOG00000006371	CRNKL1	81	87.160	Choloepus_hoffmanni
ENSSFOG00015000946	crnkl1	89	86.715	ENSCPBG00000023501	CRNKL1	97	88.537	Chrysemys_picta_bellii
ENSSFOG00015000946	crnkl1	86	68.524	ENSCING00000002709	-	97	68.477	Ciona_intestinalis
ENSSFOG00015000946	crnkl1	89	85.088	ENSCANG00000038789	CRNKL1	96	86.858	Colobus_angolensis_palliatus
ENSSFOG00015000946	crnkl1	89	85.819	ENSCGRG00001000687	-	96	87.462	Cricetulus_griseus_chok1gshd
ENSSFOG00015000946	crnkl1	89	85.819	ENSCGRG00001001115	-	96	87.462	Cricetulus_griseus_chok1gshd
ENSSFOG00015000946	crnkl1	89	85.819	ENSCGRG00000007854	Crnkl1	96	87.462	Cricetulus_griseus_crigri
ENSSFOG00015000946	crnkl1	98	81.686	ENSCSEG00000005594	crnkl1	84	90.498	Cynoglossus_semilaevis
ENSSFOG00015000946	crnkl1	87	89.955	ENSCVAG00000015172	crnkl1	89	90.045	Cyprinodon_variegatus
ENSSFOG00015000946	crnkl1	86	90.799	ENSDARG00000007901	crnkl1	88	90.799	Danio_rerio
ENSSFOG00015000946	crnkl1	90	85.507	ENSDNOG00000016226	CRNKL1	92	87.613	Dasypus_novemcinctus
ENSSFOG00015000946	crnkl1	86	80.902	ENSDORG00000023724	-	98	80.787	Dipodomys_ordii
ENSSFOG00015000946	crnkl1	87	80.360	ENSDORG00000030174	-	98	80.241	Dipodomys_ordii
ENSSFOG00015000946	crnkl1	89	84.348	ENSDORG00000000394	-	96	85.928	Dipodomys_ordii
ENSSFOG00015000946	crnkl1	86	68.366	FBgn0000377	crn	94	68.580	Drosophila_melanogaster
ENSSFOG00015000946	crnkl1	89	75.146	ENSETEG00000003711	CRNKL1	81	76.133	Echinops_telfairi
ENSSFOG00015000946	crnkl1	87	62.140	ENSEBUG00000013461	crnkl1	93	58.886	Eptatretus_burgeri
ENSSFOG00015000946	crnkl1	89	86.510	ENSEASG00005002072	CRNKL1	96	87.915	Equus_asinus_asinus
ENSSFOG00015000946	crnkl1	89	86.510	ENSECAG00000022215	CRNKL1	96	87.915	Equus_caballus
ENSSFOG00015000946	crnkl1	88	83.358	ENSEEUG00000000413	CRNKL1	89	85.045	Erinaceus_europaeus
ENSSFOG00015000946	crnkl1	87	89.985	ENSELUG00000015424	crnkl1	94	90.196	Esox_lucius
ENSSFOG00015000946	crnkl1	89	86.257	ENSFCAG00000000714	CRNKL1	96	87.915	Felis_catus
ENSSFOG00015000946	crnkl1	87	85.395	ENSFALG00000004611	CRNKL1	97	87.057	Ficedula_albicollis
ENSSFOG00015000946	crnkl1	90	85.072	ENSFDAG00000000604	CRNKL1	96	87.160	Fukomys_damarensis
ENSSFOG00015000946	crnkl1	87	90.105	ENSFHEG00000013163	crnkl1	86	90.196	Fundulus_heteroclitus
ENSSFOG00015000946	crnkl1	87	88.490	ENSGMOG00000007609	crnkl1	92	88.705	Gadus_morhua
ENSSFOG00015000946	crnkl1	89	85.985	ENSGALG00000008429	CRNKL1	97	87.632	Gallus_gallus
ENSSFOG00015000946	crnkl1	87	89.805	ENSGAFG00000014249	crnkl1	87	89.894	Gambusia_affinis
ENSSFOG00015000946	crnkl1	99	80.261	ENSGACG00000011852	crnkl1	89	88.855	Gasterosteus_aculeatus
ENSSFOG00015000946	crnkl1	85	85.038	ENSGAGG00000021233	CRNKL1	96	87.431	Gopherus_agassizii
ENSSFOG00015000946	crnkl1	89	85.234	ENSGGOG00000014176	CRNKL1	96	87.009	Gorilla_gorilla
ENSSFOG00015000946	crnkl1	94	85.989	ENSHBUG00000005246	crnkl1	88	91.403	Haplochromis_burtoni
ENSSFOG00015000946	crnkl1	88	85.988	ENSHGLG00000010856	CRNKL1	96	87.009	Heterocephalus_glaber_female
ENSSFOG00015000946	crnkl1	88	85.988	ENSHGLG00100011521	CRNKL1	96	87.009	Heterocephalus_glaber_male
ENSSFOG00015000946	crnkl1	87	87.725	ENSHCOG00000006420	crnkl1	95	87.783	Hippocampus_comes
ENSSFOG00015000946	crnkl1	88	76.106	ENSIPUG00000006836	-	97	76.853	Ictalurus_punctatus
ENSSFOG00015000946	crnkl1	83	71.496	ENSIPUG00000000315	-	99	72.441	Ictalurus_punctatus
ENSSFOG00015000946	crnkl1	89	86.735	ENSIPUG00000006751	crnkl1	96	86.272	Ictalurus_punctatus
ENSSFOG00015000946	crnkl1	89	85.965	ENSSTOG00000014747	CRNKL1	96	87.613	Ictidomys_tridecemlineatus
ENSSFOG00015000946	crnkl1	89	84.000	ENSJJAG00000016926	Crnkl1	96	85.546	Jaculus_jaculus
ENSSFOG00015000946	crnkl1	94	84.444	ENSKMAG00000003620	crnkl1	85	89.894	Kryptolebias_marmoratus
ENSSFOG00015000946	crnkl1	87	72.700	ENSLBEG00000003543	crnkl1	89	75.867	Labrus_bergylta
ENSSFOG00015000946	crnkl1	89	87.408	ENSLACG00000001129	CRNKL1	97	88.989	Latimeria_chalumnae
ENSSFOG00015000946	crnkl1	87	93.233	ENSLOCG00000016889	crnkl1	92	93.213	Lepisosteus_oculatus
ENSSFOG00015000946	crnkl1	89	85.255	ENSLAFG00000004512	CRNKL1	96	87.632	Loxodonta_africana
ENSSFOG00015000946	crnkl1	89	85.088	ENSMFAG00000039893	CRNKL1	96	86.858	Macaca_fascicularis
ENSSFOG00015000946	crnkl1	89	85.088	ENSMMUG00000007709	CRNKL1	96	86.858	Macaca_mulatta
ENSSFOG00015000946	crnkl1	89	85.088	ENSMNEG00000037490	CRNKL1	96	86.858	Macaca_nemestrina
ENSSFOG00015000946	crnkl1	89	85.088	ENSMLEG00000034885	CRNKL1	96	86.858	Mandrillus_leucophaeus
ENSSFOG00015000946	crnkl1	91	87.767	ENSMAMG00000008757	crnkl1	87	91.252	Mastacembelus_armatus
ENSSFOG00015000946	crnkl1	97	84.064	ENSMZEG00005022345	crnkl1	88	91.252	Maylandia_zebra
ENSSFOG00015000946	crnkl1	89	85.423	ENSMGAG00000003452	CRNKL1	91	87.048	Meleagris_gallopavo
ENSSFOG00015000946	crnkl1	89	85.819	ENSMAUG00000020764	Crnkl1	96	87.462	Mesocricetus_auratus
ENSSFOG00015000946	crnkl1	89	85.380	ENSMICG00000006048	CRNKL1	96	87.009	Microcebus_murinus
ENSSFOG00015000946	crnkl1	86	62.349	ENSMOCG00000004179	-	94	62.349	Microtus_ochrogaster
ENSSFOG00015000946	crnkl1	89	78.017	ENSMOCG00000000681	-	96	79.228	Microtus_ochrogaster
ENSSFOG00015000946	crnkl1	82	86.888	ENSMMOG00000017601	crnkl1	97	86.888	Mola_mola
ENSSFOG00015000946	crnkl1	89	80.117	ENSMODG00000010857	-	96	81.722	Monodelphis_domestica
ENSSFOG00015000946	crnkl1	89	83.405	ENSMODG00000005961	-	96	85.097	Monodelphis_domestica
ENSSFOG00015000946	crnkl1	96	60.431	ENSMALG00000011211	crnkl1	87	65.967	Monopterus_albus
ENSSFOG00015000946	crnkl1	89	86.257	MGP_CAROLIEiJ_G0024394	Crnkl1	96	87.764	Mus_caroli
ENSSFOG00015000946	crnkl1	89	86.111	ENSMUSG00000001767	Crnkl1	96	87.764	Mus_musculus
ENSSFOG00015000946	crnkl1	89	84.649	MGP_PahariEiJ_G0025838	Crnkl1	96	86.254	Mus_pahari
ENSSFOG00015000946	crnkl1	89	86.111	MGP_SPRETEiJ_G0025312	Crnkl1	96	87.764	Mus_spretus
ENSSFOG00015000946	crnkl1	89	86.257	ENSMPUG00000001226	CRNKL1	96	87.915	Mustela_putorius_furo
ENSSFOG00015000946	crnkl1	88	85.882	ENSMLUG00000016513	CRNKL1	86	87.632	Myotis_lucifugus
ENSSFOG00015000946	crnkl1	89	84.075	ENSNGAG00000023097	Crnkl1	96	85.630	Nannospalax_galili
ENSSFOG00015000946	crnkl1	94	85.892	ENSNBRG00000007867	crnkl1	87	91.403	Neolamprologus_brichardi
ENSSFOG00015000946	crnkl1	89	82.310	ENSNLEG00000009862	CRNKL1	96	83.988	Nomascus_leucogenys
ENSSFOG00015000946	crnkl1	89	80.088	ENSMEUG00000002361	-	96	81.750	Notamacropus_eugenii
ENSSFOG00015000946	crnkl1	87	86.099	ENSMEUG00000012167	-	97	87.944	Notamacropus_eugenii
ENSSFOG00015000946	crnkl1	67	59.459	ENSOPRG00000009242	-	60	60.679	Ochotona_princeps
ENSSFOG00015000946	crnkl1	89	85.380	ENSODEG00000012175	CRNKL1	96	87.009	Octodon_degus
ENSSFOG00015000946	crnkl1	95	85.577	ENSONIG00000018728	crnkl1	87	91.403	Oreochromis_niloticus
ENSSFOG00015000946	crnkl1	88	85.294	ENSOCUG00000015484	CRNKL1	80	87.500	Oryctolagus_cuniculus
ENSSFOG00015000946	crnkl1	99	82.045	ENSORLG00000017240	crnkl1	89	89.140	Oryzias_latipes
ENSSFOG00015000946	crnkl1	88	88.444	ENSORLG00020001742	crnkl1	89	89.291	Oryzias_latipes_hni
ENSSFOG00015000946	crnkl1	99	81.782	ENSORLG00015019564	crnkl1	89	89.291	Oryzias_latipes_hsok
ENSSFOG00015000946	crnkl1	99	82.283	ENSOMEG00000019895	crnkl1	89	89.744	Oryzias_melastigma
ENSSFOG00015000946	crnkl1	89	85.526	ENSOGAG00000011544	CRNKL1	96	87.160	Otolemur_garnettii
ENSSFOG00015000946	crnkl1	88	86.303	ENSOARG00000002150	CRNKL1	86	88.066	Ovis_aries
ENSSFOG00015000946	crnkl1	88	84.094	ENSPPAG00000027847	CRNKL1	80	85.952	Pan_paniscus
ENSSFOG00015000946	crnkl1	89	86.257	ENSPPRG00000001955	CRNKL1	96	87.915	Panthera_pardus
ENSSFOG00015000946	crnkl1	89	86.257	ENSPTIG00000007393	CRNKL1	96	87.915	Panthera_tigris_altaica
ENSSFOG00015000946	crnkl1	89	85.234	ENSPTRG00000030609	CRNKL1	96	87.009	Pan_troglodytes
ENSSFOG00015000946	crnkl1	89	85.088	ENSPANG00000017420	CRNKL1	96	86.858	Papio_anubis
ENSSFOG00015000946	crnkl1	86	87.988	ENSPKIG00000017093	crnkl1	87	87.988	Paramormyrops_kingsleyae
ENSSFOG00015000946	crnkl1	89	85.484	ENSPSIG00000012705	CRNKL1	96	87.273	Pelodiscus_sinensis
ENSSFOG00015000946	crnkl1	89	82.647	ENSPMGG00000006263	crnkl1	94	83.861	Periophthalmus_magnuspinnatus
ENSSFOG00015000946	crnkl1	89	86.111	ENSPEMG00000000073	-	96	87.764	Peromyscus_maniculatus_bairdii
ENSSFOG00015000946	crnkl1	89	80.786	ENSPMAG00000002250	crnkl1	96	82.831	Petromyzon_marinus
ENSSFOG00015000946	crnkl1	89	85.819	ENSPCIG00000025825	CRNKL1	92	87.613	Phascolarctos_cinereus
ENSSFOG00015000946	crnkl1	87	89.805	ENSPFOG00000005102	crnkl1	90	89.894	Poecilia_formosa
ENSSFOG00015000946	crnkl1	87	89.805	ENSPLAG00000007288	crnkl1	86	89.894	Poecilia_latipinna
ENSSFOG00015000946	crnkl1	87	89.955	ENSPMEG00000008865	crnkl1	90	90.045	Poecilia_mexicana
ENSSFOG00015000946	crnkl1	87	89.655	ENSPREG00000012615	crnkl1	89	89.894	Poecilia_reticulata
ENSSFOG00015000946	crnkl1	88	84.978	ENSPPYG00000010747	CRNKL1	78	86.858	Pongo_abelii
ENSSFOG00015000946	crnkl1	88	81.001	ENSPCAG00000003296	CRNKL1	82	82.628	Procavia_capensis
ENSSFOG00015000946	crnkl1	88	84.389	ENSPCOG00000017608	CRNKL1	80	86.103	Propithecus_coquereli
ENSSFOG00015000946	crnkl1	88	86.009	ENSPVAG00000006207	CRNKL1	80	87.764	Pteropus_vampyrus
ENSSFOG00015000946	crnkl1	94	85.754	ENSPNYG00000001977	crnkl1	88	91.101	Pundamilia_nyererei
ENSSFOG00015000946	crnkl1	88	91.976	ENSPNAG00000001507	crnkl1	95	88.421	Pygocentrus_nattereri
ENSSFOG00015000946	crnkl1	89	85.965	ENSRNOG00000040045	Crnkl1	96	87.613	Rattus_norvegicus
ENSSFOG00015000946	crnkl1	89	86.111	ENSRNOG00000010587	Crnkl1	96	87.764	Rattus_norvegicus
ENSSFOG00015000946	crnkl1	88	85.693	ENSRBIG00000031770	CRNKL1	96	86.858	Rhinopithecus_bieti
ENSSFOG00015000946	crnkl1	88	85.693	ENSRROG00000040450	CRNKL1	96	86.858	Rhinopithecus_roxellana
ENSSFOG00015000946	crnkl1	84	36.430	YLR117C	CLF1	98	36.284	Saccharomyces_cerevisiae
ENSSFOG00015000946	crnkl1	89	85.234	ENSSBOG00000029672	CRNKL1	96	87.009	Saimiri_boliviensis_boliviensis
ENSSFOG00015000946	crnkl1	86	71.364	ENSSHAG00000011199	CRNKL1	98	71.516	Sarcophilus_harrisii
ENSSFOG00015000946	crnkl1	89	89.197	ENSSMAG00000007933	crnkl1	86	90.361	Scophthalmus_maximus
ENSSFOG00015000946	crnkl1	87	83.383	ENSSDUG00000012625	crnkl1	85	83.584	Seriola_dumerili
ENSSFOG00015000946	crnkl1	94	85.221	ENSSLDG00000021413	crnkl1	86	91.403	Seriola_lalandi_dorsalis
ENSSFOG00015000946	crnkl1	89	85.234	ENSSARG00000006443	CRNKL1	79	86.858	Sorex_araneus
ENSSFOG00015000946	crnkl1	89	86.237	ENSSPUG00000005254	CRNKL1	97	87.934	Sphenodon_punctatus
ENSSFOG00015000946	crnkl1	93	86.573	ENSSPAG00000016150	crnkl1	86	91.403	Stegastes_partitus
ENSSFOG00015000946	crnkl1	88	86.873	ENSSSCG00000038587	CRNKL1	96	87.915	Sus_scrofa
ENSSFOG00015000946	crnkl1	89	85.131	ENSTGUG00000007645	CRNKL1	95	86.747	Taeniopygia_guttata
ENSSFOG00015000946	crnkl1	87	84.858	ENSTRUG00000015417	crnkl1	88	84.766	Takifugu_rubripes
ENSSFOG00015000946	crnkl1	87	88.922	ENSTNIG00000010710	crnkl1	96	88.855	Tetraodon_nigroviridis
ENSSFOG00015000946	crnkl1	81	85.600	ENSTBEG00000001304	CRNKL1	82	85.714	Tupaia_belangeri
ENSSFOG00015000946	crnkl1	81	83.840	ENSTTRG00000000484	CRNKL1	81	83.968	Tursiops_truncatus
ENSSFOG00015000946	crnkl1	89	86.257	ENSUAMG00000018586	CRNKL1	96	87.915	Ursus_americanus
ENSSFOG00015000946	crnkl1	89	86.257	ENSUMAG00000024957	CRNKL1	97	87.797	Ursus_maritimus
ENSSFOG00015000946	crnkl1	88	86.156	ENSVVUG00000012559	CRNKL1	79	87.915	Vulpes_vulpes
ENSSFOG00015000946	crnkl1	89	86.217	ENSXETG00000009698	crnkl1	97	87.029	Xenopus_tropicalis
ENSSFOG00015000946	crnkl1	87	88.772	ENSXCOG00000000824	crnkl1	89	88.855	Xiphophorus_couchianus
ENSSFOG00015000946	crnkl1	87	89.955	ENSXMAG00000006896	crnkl1	89	90.045	Xiphophorus_maculatus