EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015000959 (Gene tree)
Gene ID: 108924339
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: uncharacterized LOC108924339
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 5301 bases
Position: chrKV410834.1:8706029-8711329
Accession: 108924339
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015001333	zf-CCCH	PF00642.24	1.1e-05	1	1
ENSSFOP00015001338	zf-CCCH	PF00642.24	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015001372	-	3942	-	ENSSFOP00015001338	232 (aa)	-	A0A1W4YS94
ENSSFOT00015001367	-	3549	XM_018735650	ENSSFOP00015001333	232 (aa)	XP_018591166	A0A1W4YS94

Gene Model

Click here to download ENSSFOG00015000959's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015000959's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015000959	si:ch211-113e8.11	64	52.174	ENSAPOG00000010990	si:ch211-113e8.11	97	47.059	Acanthochromis_polyacanthus
ENSSFOG00015000959	si:ch211-113e8.11	58	50.000	ENSACIG00000011566	si:ch211-113e8.11	92	48.705	Amphilophus_citrinellus
ENSSFOG00015000959	si:ch211-113e8.11	97	45.600	ENSAOCG00000022156	si:ch211-113e8.11	97	46.400	Amphiprion_ocellaris
ENSSFOG00015000959	si:ch211-113e8.11	97	45.200	ENSAPEG00000018284	si:ch211-113e8.11	97	45.276	Amphiprion_percula
ENSSFOG00015000959	si:ch211-113e8.11	97	48.163	ENSATEG00000018391	si:ch211-113e8.11	97	47.755	Anabas_testudineus
ENSSFOG00015000959	si:ch211-113e8.11	97	48.163	ENSACLG00000017011	si:ch211-113e8.11	97	48.133	Astatotilapia_calliptera
ENSSFOG00015000959	si:ch211-113e8.11	95	47.809	ENSAMXG00000000733	si:ch211-113e8.11	95	47.809	Astyanax_mexicanus
ENSSFOG00015000959	si:ch211-113e8.11	97	47.177	ENSCSEG00000004538	si:ch211-113e8.11	95	46.000	Cynoglossus_semilaevis
ENSSFOG00015000959	si:ch211-113e8.11	97	45.122	ENSCVAG00000020156	si:ch211-113e8.11	96	45.902	Cyprinodon_variegatus
ENSSFOG00015000959	si:ch211-113e8.11	95	46.809	ENSDARG00000076585	si:ch211-113e8.11	97	45.570	Danio_rerio
ENSSFOG00015000959	si:ch211-113e8.11	63	38.065	FBgn0259728	CG42382	72	37.857	Drosophila_melanogaster
ENSSFOG00015000959	si:ch211-113e8.11	97	44.358	ENSELUG00000001130	si:ch211-113e8.11	97	44.358	Esox_lucius
ENSSFOG00015000959	si:ch211-113e8.11	98	49.787	ENSFHEG00000007870	si:ch211-113e8.11	97	48.133	Fundulus_heteroclitus
ENSSFOG00015000959	si:ch211-113e8.11	59	52.288	ENSGAFG00000020570	si:ch211-113e8.11	97	43.651	Gambusia_affinis
ENSSFOG00015000959	si:ch211-113e8.11	97	47.368	ENSHBUG00000003552	si:ch211-113e8.11	97	47.200	Haplochromis_burtoni
ENSSFOG00015000959	si:ch211-113e8.11	97	44.958	ENSHCOG00000002041	si:ch211-113e8.11	97	44.958	Hippocampus_comes
ENSSFOG00015000959	si:ch211-113e8.11	95	46.320	ENSIPUG00000002260	si:ch211-113e8.11	93	46.320	Ictalurus_punctatus
ENSSFOG00015000959	si:ch211-113e8.11	97	47.131	ENSKMAG00000000086	si:ch211-113e8.11	97	46.559	Kryptolebias_marmoratus
ENSSFOG00015000959	si:ch211-113e8.11	95	38.697	ENSLBEG00000008353	si:ch211-113e8.11	59	48.734	Labrus_bergylta
ENSSFOG00015000959	si:ch211-113e8.11	68	42.442	ENSLACG00000004304	si:ch211-113e8.11	86	43.258	Latimeria_chalumnae
ENSSFOG00015000959	si:ch211-113e8.11	94	46.825	ENSMAMG00000019098	si:ch211-113e8.11	86	50.224	Mastacembelus_armatus
ENSSFOG00015000959	si:ch211-113e8.11	97	47.699	ENSMZEG00005023658	si:ch211-113e8.11	97	49.787	Maylandia_zebra
ENSSFOG00015000959	si:ch211-113e8.11	64	52.439	ENSMMOG00000007254	si:ch211-113e8.11	85	49.730	Mola_mola
ENSSFOG00015000959	si:ch211-113e8.11	97	44.922	ENSMALG00000005110	si:ch211-113e8.11	97	44.922	Monopterus_albus
ENSSFOG00015000959	si:ch211-113e8.11	97	47.755	ENSNBRG00000015060	si:ch211-113e8.11	97	49.583	Neolamprologus_brichardi
ENSSFOG00015000959	si:ch211-113e8.11	97	45.968	ENSORLG00000023699	si:ch211-113e8.11	97	46.774	Oryzias_latipes
ENSSFOG00015000959	si:ch211-113e8.11	97	44.758	ENSORLG00020022094	si:ch211-113e8.11	97	46.371	Oryzias_latipes_hni
ENSSFOG00015000959	si:ch211-113e8.11	97	44.939	ENSORLG00015002588	si:ch211-113e8.11	97	46.371	Oryzias_latipes_hsok
ENSSFOG00015000959	si:ch211-113e8.11	97	43.983	ENSOMEG00000010624	si:ch211-113e8.11	97	45.763	Oryzias_melastigma
ENSSFOG00015000959	si:ch211-113e8.11	98	53.617	ENSPKIG00000023576	si:ch211-113e8.11	97	53.617	Paramormyrops_kingsleyae
ENSSFOG00015000959	si:ch211-113e8.11	95	45.532	ENSPMGG00000018547	si:ch211-113e8.11	96	44.444	Periophthalmus_magnuspinnatus
ENSSFOG00015000959	si:ch211-113e8.11	59	54.110	ENSPFOG00000007950	si:ch211-113e8.11	99	44.578	Poecilia_formosa
ENSSFOG00015000959	si:ch211-113e8.11	59	54.110	ENSPLAG00000002081	si:ch211-113e8.11	97	44.000	Poecilia_latipinna
ENSSFOG00015000959	si:ch211-113e8.11	97	46.748	ENSPMEG00000017505	si:ch211-113e8.11	97	44.130	Poecilia_mexicana
ENSSFOG00015000959	si:ch211-113e8.11	97	46.281	ENSPREG00000008530	si:ch211-113e8.11	97	46.154	Poecilia_reticulata
ENSSFOG00015000959	si:ch211-113e8.11	97	47.347	ENSPNYG00000022856	si:ch211-113e8.11	97	49.167	Pundamilia_nyererei
ENSSFOG00015000959	si:ch211-113e8.11	97	41.909	ENSPNAG00000013782	si:ch211-113e8.11	66	50.307	Pygocentrus_nattereri
ENSSFOG00015000959	si:ch211-113e8.11	97	47.581	ENSSMAG00000009732	si:ch211-113e8.11	97	48.790	Scophthalmus_maximus
ENSSFOG00015000959	si:ch211-113e8.11	97	48.425	ENSSDUG00000000112	si:ch211-113e8.11	97	49.606	Seriola_dumerili
ENSSFOG00015000959	si:ch211-113e8.11	97	48.425	ENSSLDG00000003287	si:ch211-113e8.11	97	49.606	Seriola_lalandi_dorsalis
ENSSFOG00015000959	si:ch211-113e8.11	97	47.826	ENSSPAG00000001375	si:ch211-113e8.11	97	48.193	Stegastes_partitus
ENSSFOG00015000959	si:ch211-113e8.11	97	43.933	ENSTRUG00000023898	si:ch211-113e8.11	98	46.025	Takifugu_rubripes
ENSSFOG00015000959	si:ch211-113e8.11	97	45.635	ENSXMAG00000024104	si:ch211-113e8.11	97	44.758	Xiphophorus_maculatus