EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015000985 (Gene tree)
Gene ID: 108941702
Gene Symbol: si:ch211-11k18.4
Alias: -
Full Name: uncharacterized LOC108941702
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 5875 bases
Position: chrKV411220.1:3977234-3983108
Accession: 108941702
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015001383	MMR_HSR1	PF01926.23	2.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015001405	-	1984	-	ENSSFOP00015001371	478 (aa)	-	-
ENSSFOT00015001417	-	1908	XM_018764490	ENSSFOP00015001383	475 (aa)	XP_018620006	A0A1W5B4B0

Gene Model

Click here to download ENSSFOG00015000985's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015000985's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015000985	si:ch211-11k18.4	94	58.758	ENSSFOG00015017965	si:dkey-98f17.5	100	58.758

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015000985	si:ch211-11k18.4	95	78.000	ENSAPOG00000018833	si:ch211-11k18.4	99	78.000	Acanthochromis_polyacanthus
ENSSFOG00015000985	si:ch211-11k18.4	94	59.430	ENSAPOG00000010378	si:dkey-98f17.5	100	59.430	Acanthochromis_polyacanthus
ENSSFOG00015000985	si:ch211-11k18.4	94	59.430	ENSACIG00000017719	si:dkey-98f17.5	100	59.430	Amphilophus_citrinellus
ENSSFOG00015000985	si:ch211-11k18.4	95	76.275	ENSACIG00000006696	si:ch211-11k18.4	100	76.275	Amphilophus_citrinellus
ENSSFOG00015000985	si:ch211-11k18.4	94	60.088	ENSAOCG00000008661	si:dkey-98f17.5	100	60.088	Amphiprion_ocellaris
ENSSFOG00015000985	si:ch211-11k18.4	94	78.396	ENSAOCG00000014284	si:ch211-11k18.4	99	78.396	Amphiprion_ocellaris
ENSSFOG00015000985	si:ch211-11k18.4	94	60.088	ENSAPEG00000022447	si:dkey-98f17.5	100	60.088	Amphiprion_percula
ENSSFOG00015000985	si:ch211-11k18.4	94	78.174	ENSAPEG00000014910	si:ch211-11k18.4	99	78.174	Amphiprion_percula
ENSSFOG00015000985	si:ch211-11k18.4	94	78.174	ENSATEG00000004775	si:ch211-11k18.4	99	78.174	Anabas_testudineus
ENSSFOG00015000985	si:ch211-11k18.4	94	59.430	ENSATEG00000007188	si:dkey-98f17.5	100	59.430	Anabas_testudineus
ENSSFOG00015000985	si:ch211-11k18.4	93	61.883	ENSACAG00000028632	-	98	61.883	Anolis_carolinensis
ENSSFOG00015000985	si:ch211-11k18.4	94	59.430	ENSACLG00000001308	si:dkey-98f17.5	100	59.430	Astatotilapia_calliptera
ENSSFOG00015000985	si:ch211-11k18.4	95	77.778	ENSACLG00000007907	si:ch211-11k18.4	99	77.778	Astatotilapia_calliptera
ENSSFOG00015000985	si:ch211-11k18.4	94	78.396	ENSAMXG00000017817	si:ch211-11k18.4	99	78.396	Astyanax_mexicanus
ENSSFOG00015000985	si:ch211-11k18.4	94	61.161	ENSAMXG00000001190	si:dkey-98f17.5	99	61.161	Astyanax_mexicanus
ENSSFOG00015000985	si:ch211-11k18.4	79	61.436	ENSCING00000020807	-	99	61.436	Ciona_intestinalis
ENSSFOG00015000985	si:ch211-11k18.4	94	58.797	ENSCSAVG00000009987	-	100	58.797	Ciona_savignyi
ENSSFOG00015000985	si:ch211-11k18.4	94	60.307	ENSCSEG00000017512	si:dkey-98f17.5	98	60.557	Cynoglossus_semilaevis
ENSSFOG00015000985	si:ch211-11k18.4	94	75.056	ENSCSEG00000017661	si:ch211-11k18.4	99	75.056	Cynoglossus_semilaevis
ENSSFOG00015000985	si:ch211-11k18.4	94	59.911	ENSCVAG00000011351	si:dkey-98f17.5	99	60.135	Cyprinodon_variegatus
ENSSFOG00015000985	si:ch211-11k18.4	94	79.510	ENSCVAG00000015346	si:ch211-11k18.4	99	79.510	Cyprinodon_variegatus
ENSSFOG00015000985	si:ch211-11k18.4	94	79.065	ENSDARG00000087869	si:ch211-11k18.4	100	90.816	Danio_rerio
ENSSFOG00015000985	si:ch211-11k18.4	92	60.850	ENSDARG00000068863	si:dkey-98f17.5	100	60.850	Danio_rerio
ENSSFOG00015000985	si:ch211-11k18.4	76	59.504	ENSEBUG00000007620	si:dkey-98f17.5	97	59.504	Eptatretus_burgeri
ENSSFOG00015000985	si:ch211-11k18.4	94	61.024	ENSELUG00000003365	si:dkey-98f17.5	100	61.024	Esox_lucius
ENSSFOG00015000985	si:ch211-11k18.4	94	59.465	ENSFHEG00000012744	si:dkey-98f17.5	100	59.465	Fundulus_heteroclitus
ENSSFOG00015000985	si:ch211-11k18.4	94	77.951	ENSFHEG00000019820	si:ch211-11k18.4	99	77.951	Fundulus_heteroclitus
ENSSFOG00015000985	si:ch211-11k18.4	85	69.802	ENSGMOG00000003492	si:ch211-11k18.4	100	69.802	Gadus_morhua
ENSSFOG00015000985	si:ch211-11k18.4	94	77.060	ENSGAFG00000005677	si:ch211-11k18.4	99	77.060	Gambusia_affinis
ENSSFOG00015000985	si:ch211-11k18.4	93	59.234	ENSGAFG00000012362	si:dkey-98f17.5	89	59.234	Gambusia_affinis
ENSSFOG00015000985	si:ch211-11k18.4	55	73.745	ENSGACG00000009399	si:dkey-98f17.5	100	73.745	Gasterosteus_aculeatus
ENSSFOG00015000985	si:ch211-11k18.4	85	77.228	ENSGACG00000013134	si:ch211-11k18.4	100	77.228	Gasterosteus_aculeatus
ENSSFOG00015000985	si:ch211-11k18.4	94	59.649	ENSHBUG00000008331	si:dkey-98f17.5	100	59.649	Haplochromis_burtoni
ENSSFOG00015000985	si:ch211-11k18.4	95	78.000	ENSHBUG00000020638	si:ch211-11k18.4	99	78.000	Haplochromis_burtoni
ENSSFOG00015000985	si:ch211-11k18.4	94	57.048	ENSHCOG00000016505	si:dkey-98f17.5	98	57.048	Hippocampus_comes
ENSSFOG00015000985	si:ch211-11k18.4	94	78.619	ENSHCOG00000014773	si:ch211-11k18.4	99	78.619	Hippocampus_comes
ENSSFOG00015000985	si:ch211-11k18.4	91	75.926	ENSIPUG00000016678	si:ch211-11k18.4	99	75.926	Ictalurus_punctatus
ENSSFOG00015000985	si:ch211-11k18.4	94	57.709	ENSIPUG00000019981	si:dkey-98f17.5	99	57.709	Ictalurus_punctatus
ENSSFOG00015000985	si:ch211-11k18.4	85	67.990	ENSIPUG00000016694	si:ch211-11k18.4	89	67.990	Ictalurus_punctatus
ENSSFOG00015000985	si:ch211-11k18.4	94	75.947	ENSKMAG00000009327	si:ch211-11k18.4	99	75.947	Kryptolebias_marmoratus
ENSSFOG00015000985	si:ch211-11k18.4	94	58.553	ENSKMAG00000014997	si:dkey-98f17.5	100	58.553	Kryptolebias_marmoratus
ENSSFOG00015000985	si:ch211-11k18.4	94	59.211	ENSLBEG00000012756	si:dkey-98f17.5	100	59.211	Labrus_bergylta
ENSSFOG00015000985	si:ch211-11k18.4	94	71.111	ENSLACG00000006280	si:ch211-11k18.4	99	71.111	Latimeria_chalumnae
ENSSFOG00015000985	si:ch211-11k18.4	93	59.101	ENSLACG00000017433	si:dkey-98f17.5	98	59.101	Latimeria_chalumnae
ENSSFOG00015000985	si:ch211-11k18.4	95	59.465	ENSLACG00000004899	-	100	59.465	Latimeria_chalumnae
ENSSFOG00015000985	si:ch211-11k18.4	94	60.444	ENSLOCG00000003824	si:dkey-98f17.5	99	60.444	Lepisosteus_oculatus
ENSSFOG00015000985	si:ch211-11k18.4	94	59.956	ENSMAMG00000014528	si:dkey-98f17.5	100	59.956	Mastacembelus_armatus
ENSSFOG00015000985	si:ch211-11k18.4	91	78.009	ENSMAMG00000002536	si:ch211-11k18.4	99	78.009	Mastacembelus_armatus
ENSSFOG00015000985	si:ch211-11k18.4	94	59.649	ENSMZEG00005016572	si:dkey-98f17.5	100	59.649	Maylandia_zebra
ENSSFOG00015000985	si:ch211-11k18.4	95	77.556	ENSMZEG00005008941	si:ch211-11k18.4	99	77.556	Maylandia_zebra
ENSSFOG00015000985	si:ch211-11k18.4	95	74.000	ENSMMOG00000012485	si:ch211-11k18.4	99	74.000	Mola_mola
ENSSFOG00015000985	si:ch211-11k18.4	92	59.821	ENSMALG00000012761	si:dkey-98f17.5	100	60.045	Monopterus_albus
ENSSFOG00015000985	si:ch211-11k18.4	94	77.951	ENSMALG00000019735	si:ch211-11k18.4	99	77.951	Monopterus_albus
ENSSFOG00015000985	si:ch211-11k18.4	91	77.083	ENSNBRG00000002220	si:ch211-11k18.4	98	77.083	Neolamprologus_brichardi
ENSSFOG00015000985	si:ch211-11k18.4	94	59.560	ENSNBRG00000006068	si:dkey-98f17.5	100	59.560	Neolamprologus_brichardi
ENSSFOG00015000985	si:ch211-11k18.4	95	78.000	ENSONIG00000019412	si:ch211-11k18.4	99	78.000	Oreochromis_niloticus
ENSSFOG00015000985	si:ch211-11k18.4	94	59.868	ENSONIG00000013568	si:dkey-98f17.5	100	59.868	Oreochromis_niloticus
ENSSFOG00015000985	si:ch211-11k18.4	94	76.615	ENSORLG00000012015	si:ch211-11k18.4	99	76.615	Oryzias_latipes
ENSSFOG00015000985	si:ch211-11k18.4	87	60.952	ENSORLG00000007958	si:dkey-98f17.5	96	60.952	Oryzias_latipes
ENSSFOG00015000985	si:ch211-11k18.4	94	59.430	ENSORLG00020013350	si:dkey-98f17.5	100	59.430	Oryzias_latipes_hni
ENSSFOG00015000985	si:ch211-11k18.4	94	76.169	ENSORLG00020012386	si:ch211-11k18.4	99	76.169	Oryzias_latipes_hni
ENSSFOG00015000985	si:ch211-11k18.4	94	59.430	ENSORLG00015002000	si:dkey-98f17.5	100	59.430	Oryzias_latipes_hsok
ENSSFOG00015000985	si:ch211-11k18.4	94	77.060	ENSORLG00015022862	si:ch211-11k18.4	99	77.060	Oryzias_latipes_hsok
ENSSFOG00015000985	si:ch211-11k18.4	94	59.430	ENSOMEG00000003154	si:dkey-98f17.5	100	59.430	Oryzias_melastigma
ENSSFOG00015000985	si:ch211-11k18.4	94	77.060	ENSOMEG00000018686	si:ch211-11k18.4	99	77.060	Oryzias_melastigma
ENSSFOG00015000985	si:ch211-11k18.4	94	81.069	ENSPKIG00000018807	si:ch211-11k18.4	99	81.069	Paramormyrops_kingsleyae
ENSSFOG00015000985	si:ch211-11k18.4	94	74.777	ENSPKIG00000023918	-	98	74.777	Paramormyrops_kingsleyae
ENSSFOG00015000985	si:ch211-11k18.4	94	58.575	ENSPKIG00000024621	si:dkey-98f17.5	100	58.575	Paramormyrops_kingsleyae
ENSSFOG00015000985	si:ch211-11k18.4	94	76.615	ENSPMGG00000016507	si:ch211-11k18.4	99	76.615	Periophthalmus_magnuspinnatus
ENSSFOG00015000985	si:ch211-11k18.4	94	58.862	ENSPMGG00000019065	si:dkey-98f17.5	100	58.862	Periophthalmus_magnuspinnatus
ENSSFOG00015000985	si:ch211-11k18.4	94	58.407	ENSPFOG00000015142	si:dkey-98f17.5	99	58.613	Poecilia_formosa
ENSSFOG00015000985	si:ch211-11k18.4	94	78.396	ENSPFOG00000007976	si:ch211-11k18.4	99	78.396	Poecilia_formosa
ENSSFOG00015000985	si:ch211-11k18.4	94	58.575	ENSPLAG00000003709	si:dkey-98f17.5	99	58.784	Poecilia_latipinna
ENSSFOG00015000985	si:ch211-11k18.4	94	78.396	ENSPLAG00000019794	si:ch211-11k18.4	99	78.396	Poecilia_latipinna
ENSSFOG00015000985	si:ch211-11k18.4	94	58.797	ENSPMEG00000018709	si:dkey-98f17.5	94	58.797	Poecilia_mexicana
ENSSFOG00015000985	si:ch211-11k18.4	94	78.174	ENSPMEG00000024198	si:ch211-11k18.4	99	78.174	Poecilia_mexicana
ENSSFOG00015000985	si:ch211-11k18.4	91	60.690	ENSPREG00000000708	si:dkey-98f17.5	99	60.690	Poecilia_reticulata
ENSSFOG00015000985	si:ch211-11k18.4	88	74.353	ENSPREG00000015319	si:ch211-11k18.4	97	74.353	Poecilia_reticulata
ENSSFOG00015000985	si:ch211-11k18.4	94	59.649	ENSPNYG00000017266	si:dkey-98f17.5	100	59.649	Pundamilia_nyererei
ENSSFOG00015000985	si:ch211-11k18.4	95	78.000	ENSPNYG00000017099	si:ch211-11k18.4	99	78.000	Pundamilia_nyererei
ENSSFOG00015000985	si:ch211-11k18.4	94	60.491	ENSPNAG00000021352	si:dkey-98f17.5	99	60.491	Pygocentrus_nattereri
ENSSFOG00015000985	si:ch211-11k18.4	95	78.667	ENSPNAG00000022138	si:ch211-11k18.4	100	78.667	Pygocentrus_nattereri
ENSSFOG00015000985	si:ch211-11k18.4	94	59.868	ENSSMAG00000011905	si:dkey-98f17.5	100	59.868	Scophthalmus_maximus
ENSSFOG00015000985	si:ch211-11k18.4	94	75.947	ENSSMAG00000009651	si:ch211-11k18.4	99	75.947	Scophthalmus_maximus
ENSSFOG00015000985	si:ch211-11k18.4	94	78.174	ENSSDUG00000016411	si:ch211-11k18.4	99	78.174	Seriola_dumerili
ENSSFOG00015000985	si:ch211-11k18.4	94	59.243	ENSSDUG00000013457	si:dkey-98f17.5	100	59.243	Seriola_dumerili
ENSSFOG00015000985	si:ch211-11k18.4	94	59.020	ENSSLDG00000025395	si:dkey-98f17.5	100	59.020	Seriola_lalandi_dorsalis
ENSSFOG00015000985	si:ch211-11k18.4	94	78.174	ENSSLDG00000019145	si:ch211-11k18.4	99	78.174	Seriola_lalandi_dorsalis
ENSSFOG00015000985	si:ch211-11k18.4	83	63.291	ENSSPUG00000010096	-	100	63.038	Sphenodon_punctatus
ENSSFOG00015000985	si:ch211-11k18.4	94	60.526	ENSSPAG00000018800	si:dkey-98f17.5	100	60.526	Stegastes_partitus
ENSSFOG00015000985	si:ch211-11k18.4	94	78.174	ENSSPAG00000010697	si:ch211-11k18.4	99	78.174	Stegastes_partitus
ENSSFOG00015000985	si:ch211-11k18.4	94	77.283	ENSTRUG00000020291	si:ch211-11k18.4	99	77.283	Takifugu_rubripes
ENSSFOG00015000985	si:ch211-11k18.4	94	59.868	ENSTRUG00000021287	si:dkey-98f17.5	100	59.868	Takifugu_rubripes
ENSSFOG00015000985	si:ch211-11k18.4	95	66.446	ENSXETG00000031783	-	100	66.446	Xenopus_tropicalis
ENSSFOG00015000985	si:ch211-11k18.4	94	74.833	ENSXCOG00000018094	si:ch211-11k18.4	99	74.833	Xiphophorus_couchianus
ENSSFOG00015000985	si:ch211-11k18.4	94	59.780	ENSXCOG00000017002	si:dkey-98f17.5	99	60.000	Xiphophorus_couchianus
ENSSFOG00015000985	si:ch211-11k18.4	94	77.951	ENSXMAG00000021235	si:ch211-11k18.4	99	77.951	Xiphophorus_maculatus
ENSSFOG00015000985	si:ch211-11k18.4	94	59.020	ENSXMAG00000007688	si:dkey-98f17.5	95	59.020	Xiphophorus_maculatus