EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015001035 (Gene tree)
Gene ID: 108927999
Gene Symbol: riok1
Alias: fb99f04|wu:fb99f04|zgc:56195
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 9901 bases
Position: chrKV410882.1:1855138-1865038
Accession: 108927999
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015001521	RIO1	PF01163.22	6.5e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015001557	-	3948	XM_018741719	ENSSFOP00015001521	553 (aa)	XP_018597235	-

Gene Model

Click here to download ENSSFOG00015001035's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015001035's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015001035	riok1	50	45.390	ENSSFOG00015012912	riok3	60	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015001035	riok1	88	73.737	ENSG00000124784	RIOK1	87	72.233	Homo_sapiens
ENSSFOG00015001035	riok1	57	71.293	ENSAPOG00000015632	riok1	99	71.293	Acanthochromis_polyacanthus
ENSSFOG00015001035	riok1	99	68.794	ENSAMEG00000017367	RIOK1	86	74.239	Ailuropoda_melanoleuca
ENSSFOG00015001035	riok1	89	77.282	ENSACIG00000003735	riok1	88	77.664	Amphilophus_citrinellus
ENSSFOG00015001035	riok1	99	72.313	ENSAOCG00000011818	riok1	88	77.254	Amphiprion_ocellaris
ENSSFOG00015001035	riok1	99	71.636	ENSAPEG00000001345	riok1	88	77.049	Amphiprion_percula
ENSSFOG00015001035	riok1	83	76.906	ENSATEG00000006594	riok1	99	76.906	Anabas_testudineus
ENSSFOG00015001035	riok1	85	77.966	ENSAPLG00000004196	RIOK1	100	77.542	Anas_platyrhynchos
ENSSFOG00015001035	riok1	99	70.088	ENSACAG00000000695	RIOK1	88	75.605	Anolis_carolinensis
ENSSFOG00015001035	riok1	99	57.986	ENSANAG00000023777	RIOK1	87	62.173	Aotus_nancymaae
ENSSFOG00015001035	riok1	100	73.429	ENSACLG00000015799	riok1	90	79.226	Astatotilapia_calliptera
ENSSFOG00015001035	riok1	99	75.131	ENSAMXG00000015286	riok1	84	81.224	Astyanax_mexicanus
ENSSFOG00015001035	riok1	99	68.929	ENSBTAG00000013821	RIOK1	90	71.569	Bos_taurus
ENSSFOG00015001035	riok1	87	45.194	WBGene00019698	riok-1	85	48.115	Caenorhabditis_elegans
ENSSFOG00015001035	riok1	99	66.493	ENSCJAG00000042960	RIOK1	87	72.032	Callithrix_jacchus
ENSSFOG00015001035	riok1	88	74.545	ENSCAFG00000009563	RIOK1	86	73.631	Canis_familiaris
ENSSFOG00015001035	riok1	84	73.922	ENSCAFG00020013233	RIOK1	73	80.049	Canis_lupus_dingo
ENSSFOG00015001035	riok1	99	68.984	ENSCHIG00000001534	RIOK1	86	73.566	Capra_hircus
ENSSFOG00015001035	riok1	67	72.823	ENSTSYG00000011368	RIOK1	100	72.866	Carlito_syrichta
ENSSFOG00015001035	riok1	80	74.279	ENSCAPG00000008489	RIOK1	100	73.922	Cavia_aperea
ENSSFOG00015001035	riok1	97	67.818	ENSCPOG00000009882	RIOK1	87	72.435	Cavia_porcellus
ENSSFOG00015001035	riok1	99	67.434	ENSCCAG00000024061	RIOK1	87	72.233	Cebus_capucinus
ENSSFOG00015001035	riok1	99	68.206	ENSCATG00000001548	RIOK1	87	72.636	Cercocebus_atys
ENSSFOG00015001035	riok1	99	70.463	ENSCLAG00000003522	RIOK1	98	70.000	Chinchilla_lanigera
ENSSFOG00015001035	riok1	81	72.985	ENSCSAG00000007396	RIOK1	77	77.590	Chlorocebus_sabaeus
ENSSFOG00015001035	riok1	64	84.615	ENSCHOG00000001873	RIOK1	64	84.615	Choloepus_hoffmanni
ENSSFOG00015001035	riok1	86	75.574	ENSCPBG00000008685	RIOK1	72	81.687	Chrysemys_picta_bellii
ENSSFOG00015001035	riok1	99	68.384	ENSCANG00000032919	RIOK1	87	72.636	Colobus_angolensis_palliatus
ENSSFOG00015001035	riok1	99	66.607	ENSCGRG00001018868	Riok1	88	70.624	Cricetulus_griseus_chok1gshd
ENSSFOG00015001035	riok1	99	66.607	ENSCGRG00000008015	Riok1	88	70.624	Cricetulus_griseus_crigri
ENSSFOG00015001035	riok1	89	52.505	ENSCSEG00000015014	riok1	86	52.236	Cynoglossus_semilaevis
ENSSFOG00015001035	riok1	58	68.339	ENSCVAG00000011291	riok1	99	67.391	Cyprinodon_variegatus
ENSSFOG00015001035	riok1	99	75.179	ENSDARG00000016399	riok1	88	81.263	Danio_rerio
ENSSFOG00015001035	riok1	99	68.607	ENSDNOG00000015813	RIOK1	85	75.670	Dasypus_novemcinctus
ENSSFOG00015001035	riok1	99	69.627	ENSDORG00000008530	Riok1	86	73.834	Dipodomys_ordii
ENSSFOG00015001035	riok1	82	53.404	FBgn0036187	RIOK1	82	51.318	Drosophila_melanogaster
ENSSFOG00015001035	riok1	99	68.384	ENSETEG00000020273	RIOK1	87	72.211	Echinops_telfairi
ENSSFOG00015001035	riok1	88	66.324	ENSEBUG00000013672	riok1	86	66.324	Eptatretus_burgeri
ENSSFOG00015001035	riok1	94	64.545	ENSEASG00005012032	RIOK1	72	78.589	Equus_asinus_asinus
ENSSFOG00015001035	riok1	99	65.411	ENSECAG00000009007	RIOK1	99	68.206	Equus_caballus
ENSSFOG00015001035	riok1	76	64.450	ENSEEUG00000007123	RIOK1	90	68.274	Erinaceus_europaeus
ENSSFOG00015001035	riok1	100	72.302	ENSELUG00000017029	riok1	100	72.302	Esox_lucius
ENSSFOG00015001035	riok1	99	68.683	ENSFCAG00000027290	RIOK1	86	73.428	Felis_catus
ENSSFOG00015001035	riok1	99	68.607	ENSFALG00000013244	RIOK1	87	75.764	Ficedula_albicollis
ENSSFOG00015001035	riok1	99	68.739	ENSFDAG00000019139	RIOK1	98	68.214	Fukomys_damarensis
ENSSFOG00015001035	riok1	81	74.667	ENSFHEG00000021419	riok1	86	81.074	Fundulus_heteroclitus
ENSSFOG00015001035	riok1	75	78.450	ENSGMOG00000018668	riok1	95	78.870	Gadus_morhua
ENSSFOG00015001035	riok1	58	72.308	ENSGALG00000012795	RIOK1	100	71.692	Gallus_gallus
ENSSFOG00015001035	riok1	85	64.043	ENSGAFG00000004091	riok1	79	64.043	Gambusia_affinis
ENSSFOG00015001035	riok1	97	70.093	ENSGACG00000002496	riok1	94	78.279	Gasterosteus_aculeatus
ENSSFOG00015001035	riok1	81	75.388	ENSGAGG00000002262	RIOK1	87	81.752	Gopherus_agassizii
ENSSFOG00015001035	riok1	77	79.573	ENSGGOG00000011037	RIOK1	86	78.916	Gorilla_gorilla
ENSSFOG00015001035	riok1	99	68.223	ENSHGLG00000008699	RIOK1	86	72.245	Heterocephalus_glaber_female
ENSSFOG00015001035	riok1	99	68.165	ENSHGLG00100008188	RIOK1	86	72.188	Heterocephalus_glaber_male
ENSSFOG00015001035	riok1	89	73.038	ENSHCOG00000013275	riok1	91	73.211	Hippocampus_comes
ENSSFOG00015001035	riok1	99	73.498	ENSIPUG00000003290	riok1	87	80.285	Ictalurus_punctatus
ENSSFOG00015001035	riok1	99	68.571	ENSSTOG00000009289	RIOK1	86	73.631	Ictidomys_tridecemlineatus
ENSSFOG00015001035	riok1	99	69.604	ENSJJAG00000015152	Riok1	98	68.885	Jaculus_jaculus
ENSSFOG00015001035	riok1	70	76.410	ENSKMAG00000019378	riok1	100	76.410	Kryptolebias_marmoratus
ENSSFOG00015001035	riok1	89	77.282	ENSLBEG00000016650	riok1	87	77.869	Labrus_bergylta
ENSSFOG00015001035	riok1	99	64.821	ENSLACG00000000300	RIOK1	87	68.357	Latimeria_chalumnae
ENSSFOG00015001035	riok1	99	78.159	ENSLOCG00000011728	riok1	98	78.700	Lepisosteus_oculatus
ENSSFOG00015001035	riok1	99	70.018	ENSLAFG00000005504	RIOK1	89	73.441	Loxodonta_africana
ENSSFOG00015001035	riok1	99	68.206	ENSMFAG00000029990	RIOK1	87	72.636	Macaca_fascicularis
ENSSFOG00015001035	riok1	99	68.028	ENSMMUG00000015577	RIOK1	87	72.435	Macaca_mulatta
ENSSFOG00015001035	riok1	99	65.542	ENSMNEG00000034396	RIOK1	84	77.608	Macaca_nemestrina
ENSSFOG00015001035	riok1	86	75.155	ENSMLEG00000026327	RIOK1	87	72.435	Mandrillus_leucophaeus
ENSSFOG00015001035	riok1	99	72.232	ENSMAMG00000019557	riok1	88	77.049	Mastacembelus_armatus
ENSSFOG00015001035	riok1	100	72.872	ENSMZEG00005019482	riok1	89	79.226	Maylandia_zebra
ENSSFOG00015001035	riok1	99	70.916	ENSMGAG00000003816	RIOK1	87	75.659	Meleagris_gallopavo
ENSSFOG00015001035	riok1	99	66.961	ENSMAUG00000012751	Riok1	88	70.624	Mesocricetus_auratus
ENSSFOG00015001035	riok1	99	69.081	ENSMICG00000044301	RIOK1	74	74.447	Microcebus_murinus
ENSSFOG00015001035	riok1	99	65.658	ENSMOCG00000017032	Riok1	88	70.363	Microtus_ochrogaster
ENSSFOG00015001035	riok1	85	69.721	ENSMMOG00000020598	riok1	87	69.721	Mola_mola
ENSSFOG00015001035	riok1	88	76.423	ENSMODG00000009964	RIOK1	86	74.949	Monodelphis_domestica
ENSSFOG00015001035	riok1	89	68.966	ENSMALG00000019982	riok1	91	70.417	Monopterus_albus
ENSSFOG00015001035	riok1	99	65.957	MGP_CAROLIEiJ_G0018439	Riok1	88	70.221	Mus_caroli
ENSSFOG00015001035	riok1	99	65.841	ENSMUSG00000021428	Riok1	99	66.505	Mus_musculus
ENSSFOG00015001035	riok1	99	65.426	MGP_PahariEiJ_G0019507	Riok1	88	70.020	Mus_pahari
ENSSFOG00015001035	riok1	99	65.957	MGP_SPRETEiJ_G0019319	Riok1	88	70.423	Mus_spretus
ENSSFOG00015001035	riok1	99	68.617	ENSMPUG00000000570	RIOK1	84	75.000	Mustela_putorius_furo
ENSSFOG00015001035	riok1	99	65.464	ENSMLUG00000015312	RIOK1	87	72.984	Myotis_lucifugus
ENSSFOG00015001035	riok1	99	69.751	ENSNGAG00000021734	Riok1	98	68.515	Nannospalax_galili
ENSSFOG00015001035	riok1	72	85.894	ENSNBRG00000017489	riok1	83	80.137	Neolamprologus_brichardi
ENSSFOG00015001035	riok1	99	60.000	ENSNLEG00000011621	RIOK1	86	65.182	Nomascus_leucogenys
ENSSFOG00015001035	riok1	85	49.049	ENSMEUG00000006679	-	84	49.260	Notamacropus_eugenii
ENSSFOG00015001035	riok1	67	73.046	ENSOPRG00000009524	RIOK1	100	73.046	Ochotona_princeps
ENSSFOG00015001035	riok1	70	60.202	ENSODEG00000005663	RIOK1	77	67.712	Octodon_degus
ENSSFOG00015001035	riok1	100	74.686	ENSONIG00000014010	riok1	87	79.918	Oreochromis_niloticus
ENSSFOG00015001035	riok1	83	78.233	ENSOANG00000012553	RIOK1	100	78.233	Ornithorhynchus_anatinus
ENSSFOG00015001035	riok1	86	73.211	ENSOCUG00000011824	RIOK1	86	73.156	Oryctolagus_cuniculus
ENSSFOG00015001035	riok1	99	72.414	ENSORLG00000008221	riok1	88	76.230	Oryzias_latipes
ENSSFOG00015001035	riok1	99	69.526	ENSORLG00020013838	riok1	62	73.663	Oryzias_latipes_hni
ENSSFOG00015001035	riok1	99	71.898	ENSORLG00015009817	riok1	88	76.230	Oryzias_latipes_hsok
ENSSFOG00015001035	riok1	99	72.495	ENSOMEG00000002758	riok1	80	77.049	Oryzias_melastigma
ENSSFOG00015001035	riok1	99	65.946	ENSOGAG00000010192	RIOK1	98	65.468	Otolemur_garnettii
ENSSFOG00015001035	riok1	99	68.917	ENSOARG00000017747	RIOK1	86	73.975	Ovis_aries
ENSSFOG00015001035	riok1	88	64.659	ENSPPAG00000016349	RIOK1	100	69.632	Pan_paniscus
ENSSFOG00015001035	riok1	99	68.440	ENSPPRG00000001932	RIOK1	84	75.052	Panthera_pardus
ENSSFOG00015001035	riok1	99	68.440	ENSPTIG00000018545	RIOK1	84	75.052	Panthera_tigris_altaica
ENSSFOG00015001035	riok1	88	73.939	ENSPTRG00000017700	RIOK1	87	72.435	Pan_troglodytes
ENSSFOG00015001035	riok1	99	68.206	ENSPANG00000016522	RIOK1	87	72.636	Papio_anubis
ENSSFOG00015001035	riok1	99	81.408	ENSPKIG00000006442	riok1	99	80.866	Paramormyrops_kingsleyae
ENSSFOG00015001035	riok1	88	78.138	ENSPSIG00000006488	RIOK1	87	77.621	Pelodiscus_sinensis
ENSSFOG00015001035	riok1	72	73.737	ENSPMGG00000017807	riok1	96	69.722	Periophthalmus_magnuspinnatus
ENSSFOG00015001035	riok1	88	72.414	ENSPEMG00000017844	Riok1	88	71.026	Peromyscus_maniculatus_bairdii
ENSSFOG00015001035	riok1	72	69.268	ENSPMAG00000006351	riok1	80	76.106	Petromyzon_marinus
ENSSFOG00015001035	riok1	81	75.055	ENSPCIG00000012653	RIOK1	73	79.075	Phascolarctos_cinereus
ENSSFOG00015001035	riok1	99	66.362	ENSPFOG00000011532	riok1	89	71.107	Poecilia_formosa
ENSSFOG00015001035	riok1	99	67.093	ENSPLAG00000001341	riok1	89	70.902	Poecilia_latipinna
ENSSFOG00015001035	riok1	99	66.179	ENSPMEG00000007710	riok1	92	70.902	Poecilia_mexicana
ENSSFOG00015001035	riok1	99	66.179	ENSPREG00000009237	riok1	90	70.697	Poecilia_reticulata
ENSSFOG00015001035	riok1	88	73.939	ENSPPYG00000016207	RIOK1	87	72.435	Pongo_abelii
ENSSFOG00015001035	riok1	99	59.279	ENSPCAG00000007892	RIOK1	89	61.771	Procavia_capensis
ENSSFOG00015001035	riok1	99	68.198	ENSPVAG00000014091	RIOK1	86	73.482	Pteropus_vampyrus
ENSSFOG00015001035	riok1	58	77.812	ENSPNYG00000004465	riok1	100	77.812	Pundamilia_nyererei
ENSSFOG00015001035	riok1	99	76.259	ENSPNAG00000015435	riok1	87	82.653	Pygocentrus_nattereri
ENSSFOG00015001035	riok1	99	66.369	ENSRNOG00000014049	Riok1	100	72.903	Rattus_norvegicus
ENSSFOG00015001035	riok1	99	68.739	ENSRBIG00000036685	RIOK1	87	72.435	Rhinopithecus_bieti
ENSSFOG00015001035	riok1	99	68.917	ENSRROG00000036611	RIOK1	87	72.636	Rhinopithecus_roxellana
ENSSFOG00015001035	riok1	61	40.274	YOR119C	RIO1	95	36.939	Saccharomyces_cerevisiae
ENSSFOG00015001035	riok1	99	67.073	ENSSBOG00000012588	RIOK1	87	72.636	Saimiri_boliviensis_boliviensis
ENSSFOG00015001035	riok1	71	80.605	ENSSHAG00000003091	RIOK1	77	80.605	Sarcophilus_harrisii
ENSSFOG00015001035	riok1	58	72.188	ENSSDUG00000007291	riok1	100	71.250	Seriola_dumerili
ENSSFOG00015001035	riok1	100	74.731	ENSSLDG00000017657	riok1	100	73.656	Seriola_lalandi_dorsalis
ENSSFOG00015001035	riok1	87	65.975	ENSSPUG00000007624	RIOK1	83	65.560	Sphenodon_punctatus
ENSSFOG00015001035	riok1	99	72.000	ENSSPAG00000022710	riok1	90	76.434	Stegastes_partitus
ENSSFOG00015001035	riok1	99	67.145	ENSSSCG00000001024	RIOK1	87	72.414	Sus_scrofa
ENSSFOG00015001035	riok1	88	75.862	ENSTGUG00000002331	RIOK1	86	75.610	Taeniopygia_guttata
ENSSFOG00015001035	riok1	81	62.946	ENSTRUG00000002854	riok1	94	66.667	Takifugu_rubripes
ENSSFOG00015001035	riok1	52	66.323	ENSTRUG00000001575	-	100	65.636	Takifugu_rubripes
ENSSFOG00015001035	riok1	100	63.604	ENSTNIG00000003078	riok1	87	67.404	Tetraodon_nigroviridis
ENSSFOG00015001035	riok1	99	66.786	ENSTBEG00000016730	RIOK1	87	70.994	Tupaia_belangeri
ENSSFOG00015001035	riok1	70	80.155	ENSTTRG00000017335	RIOK1	81	80.155	Tursiops_truncatus
ENSSFOG00015001035	riok1	95	67.664	ENSUAMG00000003721	RIOK1	73	79.562	Ursus_americanus
ENSSFOG00015001035	riok1	99	68.972	ENSUMAG00000018461	RIOK1	98	66.323	Ursus_maritimus
ENSSFOG00015001035	riok1	60	80.426	ENSVPAG00000010813	-	63	80.426	Vicugna_pacos
ENSSFOG00015001035	riok1	88	74.747	ENSVVUG00000005018	RIOK1	86	73.834	Vulpes_vulpes
ENSSFOG00015001035	riok1	89	71.805	ENSXETG00000020436	riok1	86	72.407	Xenopus_tropicalis
ENSSFOG00015001035	riok1	85	67.377	ENSXCOG00000000245	riok1	100	67.377	Xiphophorus_couchianus
ENSSFOG00015001035	riok1	85	68.008	ENSXMAG00000014572	riok1	80	73.608	Xiphophorus_maculatus