EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015001042 (Gene tree)
Gene ID: 108918081
Gene Symbol: lrpprc
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 46312 bases
Position: chrKV411250.1:7184289-7230600
Accession: 108918081
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015001456	PPR	PF01535.20	8.9e-33	1	5
ENSSFOP00015001456	PPR	PF01535.20	8.9e-33	2	5
ENSSFOP00015001456	PPR	PF01535.20	8.9e-33	3	5
ENSSFOP00015001456	PPR	PF01535.20	8.9e-33	4	5
ENSSFOP00015001456	PPR	PF01535.20	8.9e-33	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015001492	-	6874	XM_018725012	ENSSFOP00015001456	1447 (aa)	XP_018580528	A0A1W4XWB2

Gene Model

Click here to download ENSSFOG00015001042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015001042's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015001042	lrpprc	99	56.362	ENSAPOG00000016610	lrpprc	99	56.362	Acanthochromis_polyacanthus
ENSSFOG00015001042	lrpprc	96	51.328	ENSAMEG00000005852	LRPPRC	99	51.081	Ailuropoda_melanoleuca
ENSSFOG00015001042	lrpprc	99	53.214	ENSACIG00000009604	lrpprc	99	53.214	Amphilophus_citrinellus
ENSSFOG00015001042	lrpprc	99	56.630	ENSAOCG00000005886	lrpprc	99	56.630	Amphiprion_ocellaris
ENSSFOG00015001042	lrpprc	99	54.022	ENSAPEG00000002937	lrpprc	98	54.022	Amphiprion_percula
ENSSFOG00015001042	lrpprc	91	54.776	ENSATEG00000010555	lrpprc	97	54.776	Anabas_testudineus
ENSSFOG00015001042	lrpprc	95	55.225	ENSACAG00000029278	LRPPRC	100	53.905	Anolis_carolinensis
ENSSFOG00015001042	lrpprc	99	51.423	ENSANAG00000027440	LRPPRC	99	55.166	Aotus_nancymaae
ENSSFOG00015001042	lrpprc	95	54.226	ENSACLG00000023712	lrpprc	99	54.226	Astatotilapia_calliptera
ENSSFOG00015001042	lrpprc	99	50.657	ENSCJAG00000000794	LRPPRC	98	54.696	Callithrix_jacchus
ENSSFOG00015001042	lrpprc	99	51.534	ENSCHIG00000020173	LRPPRC	99	51.534	Capra_hircus
ENSSFOG00015001042	lrpprc	93	40.177	ENSCAPG00000013631	LRPPRC	97	40.177	Cavia_aperea
ENSSFOG00015001042	lrpprc	85	49.839	ENSCPOG00000000204	LRPPRC	99	49.839	Cavia_porcellus
ENSSFOG00015001042	lrpprc	99	51.042	ENSCCAG00000031900	LRPPRC	98	55.410	Cebus_capucinus
ENSSFOG00015001042	lrpprc	99	50.874	ENSCATG00000014187	LRPPRC	98	53.832	Cercocebus_atys
ENSSFOG00015001042	lrpprc	99	49.548	ENSCLAG00000005203	LRPPRC	99	49.548	Chinchilla_lanigera
ENSSFOG00015001042	lrpprc	99	50.557	ENSCSAG00000013233	LRPPRC	99	51.008	Chlorocebus_sabaeus
ENSSFOG00015001042	lrpprc	82	49.609	ENSCHOG00000003631	LRPPRC	84	49.609	Choloepus_hoffmanni
ENSSFOG00015001042	lrpprc	92	50.261	ENSCANG00000034961	LRPPRC	99	56.364	Colobus_angolensis_palliatus
ENSSFOG00015001042	lrpprc	99	50.244	ENSCGRG00001016261	Lrpprc	99	50.069	Cricetulus_griseus_chok1gshd
ENSSFOG00015001042	lrpprc	99	50.244	ENSCGRG00000004072	Lrpprc	99	50.069	Cricetulus_griseus_crigri
ENSSFOG00015001042	lrpprc	99	44.027	ENSCSEG00000003850	lrpprc	96	49.608	Cynoglossus_semilaevis
ENSSFOG00015001042	lrpprc	99	56.582	ENSCVAG00000012967	lrpprc	100	56.582	Cyprinodon_variegatus
ENSSFOG00015001042	lrpprc	99	54.483	ENSDARG00000043970	lrpprc	98	54.483	Danio_rerio
ENSSFOG00015001042	lrpprc	76	40.159	ENSDNOG00000032336	-	96	40.159	Dasypus_novemcinctus
ENSSFOG00015001042	lrpprc	99	50.487	ENSDNOG00000012594	-	99	50.627	Dasypus_novemcinctus
ENSSFOG00015001042	lrpprc	95	51.855	ENSDORG00000012233	Lrpprc	99	51.077	Dipodomys_ordii
ENSSFOG00015001042	lrpprc	99	49.791	ENSETEG00000006657	LRPPRC	99	49.895	Echinops_telfairi
ENSSFOG00015001042	lrpprc	81	43.102	ENSEEUG00000012340	LRPPRC	90	43.102	Erinaceus_europaeus
ENSSFOG00015001042	lrpprc	95	53.130	ENSELUG00000012803	lrpprc	99	53.130	Esox_lucius
ENSSFOG00015001042	lrpprc	99	51.604	ENSFCAG00000013468	LRPPRC	99	51.604	Felis_catus
ENSSFOG00015001042	lrpprc	94	47.515	ENSFALG00000012738	LRPPRC	99	47.515	Ficedula_albicollis
ENSSFOG00015001042	lrpprc	99	48.858	ENSFDAG00000015328	LRPPRC	99	48.858	Fukomys_damarensis
ENSSFOG00015001042	lrpprc	99	55.755	ENSFHEG00000019604	lrpprc	100	55.755	Fundulus_heteroclitus
ENSSFOG00015001042	lrpprc	99	52.101	ENSGMOG00000008337	lrpprc	99	52.101	Gadus_morhua
ENSSFOG00015001042	lrpprc	99	55.911	ENSGAFG00000001455	lrpprc	99	55.911	Gambusia_affinis
ENSSFOG00015001042	lrpprc	99	54.077	ENSGACG00000010679	lrpprc	99	55.523	Gasterosteus_aculeatus
ENSSFOG00015001042	lrpprc	99	57.605	ENSHBUG00000000393	lrpprc	98	57.605	Haplochromis_burtoni
ENSSFOG00015001042	lrpprc	99	49.550	ENSHGLG00000006123	LRPPRC	99	49.550	Heterocephalus_glaber_female
ENSSFOG00015001042	lrpprc	78	48.492	ENSHGLG00100005960	-	99	48.492	Heterocephalus_glaber_male
ENSSFOG00015001042	lrpprc	97	54.958	ENSHCOG00000002107	lrpprc	100	54.958	Hippocampus_comes
ENSSFOG00015001042	lrpprc	99	57.631	ENSIPUG00000009406	lrpprc	98	57.631	Ictalurus_punctatus
ENSSFOG00015001042	lrpprc	99	51.253	ENSSTOG00000011185	LRPPRC	99	51.385	Ictidomys_tridecemlineatus
ENSSFOG00015001042	lrpprc	99	51.602	ENSJJAG00000020475	Lrpprc	99	51.635	Jaculus_jaculus
ENSSFOG00015001042	lrpprc	97	51.346	ENSKMAG00000003287	lrpprc	84	51.346	Kryptolebias_marmoratus
ENSSFOG00015001042	lrpprc	99	49.965	ENSLBEG00000023225	lrpprc	96	57.422	Labrus_bergylta
ENSSFOG00015001042	lrpprc	99	55.278	ENSLACG00000014030	LRPPRC	99	55.278	Latimeria_chalumnae
ENSSFOG00015001042	lrpprc	98	56.618	ENSLOCG00000016390	lrpprc	97	56.416	Lepisosteus_oculatus
ENSSFOG00015001042	lrpprc	99	48.245	ENSLAFG00000008614	LRPPRC	99	48.378	Loxodonta_africana
ENSSFOG00015001042	lrpprc	99	50.383	ENSMFAG00000041560	LRPPRC	99	53.488	Macaca_fascicularis
ENSSFOG00015001042	lrpprc	98	49.686	ENSMMUG00000019841	LRPPRC	99	53.114	Macaca_mulatta
ENSSFOG00015001042	lrpprc	99	50.731	ENSMNEG00000031613	LRPPRC	98	53.645	Macaca_nemestrina
ENSSFOG00015001042	lrpprc	97	51.197	ENSMAMG00000021835	lrpprc	97	51.089	Mastacembelus_armatus
ENSSFOG00015001042	lrpprc	99	57.467	ENSMZEG00005027379	lrpprc	99	57.467	Maylandia_zebra
ENSSFOG00015001042	lrpprc	99	50.452	ENSMAUG00000012118	Lrpprc	99	50.392	Mesocricetus_auratus
ENSSFOG00015001042	lrpprc	99	51.111	ENSMICG00000010486	LRPPRC	99	54.344	Microcebus_murinus
ENSSFOG00015001042	lrpprc	99	50.382	ENSMOCG00000006048	Lrpprc	99	50.382	Microtus_ochrogaster
ENSSFOG00015001042	lrpprc	99	59.533	ENSMMOG00000007830	lrpprc	100	59.533	Mola_mola
ENSSFOG00015001042	lrpprc	93	52.889	ENSMODG00000000648	LRPPRC	98	52.889	Monodelphis_domestica
ENSSFOG00015001042	lrpprc	99	53.687	ENSMALG00000001271	lrpprc	99	53.825	Monopterus_albus
ENSSFOG00015001042	lrpprc	99	50.898	ENSMPUG00000011800	LRPPRC	99	52.713	Mustela_putorius_furo
ENSSFOG00015001042	lrpprc	99	50.521	ENSMLUG00000010575	LRPPRC	99	50.521	Myotis_lucifugus
ENSSFOG00015001042	lrpprc	99	50.731	ENSNGAG00000013069	Lrpprc	99	50.731	Nannospalax_galili
ENSSFOG00015001042	lrpprc	93	52.244	ENSNBRG00000013202	lrpprc	92	60.254	Neolamprologus_brichardi
ENSSFOG00015001042	lrpprc	99	50.663	ENSNLEG00000016782	LRPPRC	99	55.083	Nomascus_leucogenys
ENSSFOG00015001042	lrpprc	89	45.613	ENSOPRG00000016774	LRPPRC	92	45.613	Ochotona_princeps
ENSSFOG00015001042	lrpprc	99	50.243	ENSODEG00000011211	LRPPRC	99	50.381	Octodon_degus
ENSSFOG00015001042	lrpprc	99	57.811	ENSONIG00000000917	lrpprc	99	57.700	Oreochromis_niloticus
ENSSFOG00015001042	lrpprc	54	48.604	ENSOANG00000014670	-	99	48.604	Ornithorhynchus_anatinus
ENSSFOG00015001042	lrpprc	99	50.865	ENSOCUG00000015046	LRPPRC	96	50.865	Oryctolagus_cuniculus
ENSSFOG00015001042	lrpprc	99	52.856	ENSORLG00000004605	lrpprc	98	51.308	Oryzias_latipes
ENSSFOG00015001042	lrpprc	90	55.936	ENSORLG00020012536	lrpprc	98	55.371	Oryzias_latipes_hni
ENSSFOG00015001042	lrpprc	99	52.111	ENSORLG00015018270	lrpprc	99	57.505	Oryzias_latipes_hsok
ENSSFOG00015001042	lrpprc	99	49.965	ENSOGAG00000012798	LRPPRC	99	50.070	Otolemur_garnettii
ENSSFOG00015001042	lrpprc	93	52.823	ENSOARG00000006522	LRPPRC	99	51.568	Ovis_aries
ENSSFOG00015001042	lrpprc	99	49.441	ENSPPAG00000040876	LRPPRC	98	53.235	Pan_paniscus
ENSSFOG00015001042	lrpprc	99	51.357	ENSPPRG00000006578	LRPPRC	99	51.357	Panthera_pardus
ENSSFOG00015001042	lrpprc	95	52.142	ENSPTIG00000000933	LRPPRC	96	52.142	Panthera_tigris_altaica
ENSSFOG00015001042	lrpprc	99	50.733	ENSPTRG00000011880	LRPPRC	98	53.803	Pan_troglodytes
ENSSFOG00015001042	lrpprc	99	50.383	ENSPANG00000020731	LRPPRC	98	53.458	Papio_anubis
ENSSFOG00015001042	lrpprc	90	69.742	ENSPKIG00000022232	lrpprc	98	69.742	Paramormyrops_kingsleyae
ENSSFOG00015001042	lrpprc	61	54.205	ENSPSIG00000006830	-	98	54.205	Pelodiscus_sinensis
ENSSFOG00015001042	lrpprc	67	49.437	ENSPMGG00000016597	lrpprc	98	49.539	Periophthalmus_magnuspinnatus
ENSSFOG00015001042	lrpprc	92	46.309	ENSPMAG00000002147	lrpprc	99	46.309	Petromyzon_marinus
ENSSFOG00015001042	lrpprc	99	55.000	ENSPFOG00000011227	lrpprc	99	55.000	Poecilia_formosa
ENSSFOG00015001042	lrpprc	99	54.861	ENSPLAG00000004018	lrpprc	99	54.861	Poecilia_latipinna
ENSSFOG00015001042	lrpprc	99	55.000	ENSPMEG00000016425	lrpprc	99	55.000	Poecilia_mexicana
ENSSFOG00015001042	lrpprc	99	55.278	ENSPREG00000003662	lrpprc	99	55.278	Poecilia_reticulata
ENSSFOG00015001042	lrpprc	57	48.792	ENSPPYG00000029532	-	99	48.792	Pongo_abelii
ENSSFOG00015001042	lrpprc	81	50.166	ENSPCAG00000001430	LRPPRC	84	50.249	Procavia_capensis
ENSSFOG00015001042	lrpprc	99	48.271	ENSPVAG00000002007	LRPPRC	99	48.684	Pteropus_vampyrus
ENSSFOG00015001042	lrpprc	99	52.747	ENSPNYG00000000756	lrpprc	100	52.603	Pundamilia_nyererei
ENSSFOG00015001042	lrpprc	99	58.844	ENSPNAG00000002895	lrpprc	99	58.844	Pygocentrus_nattereri
ENSSFOG00015001042	lrpprc	99	50.347	ENSRNOG00000005877	Lrpprc	99	50.415	Rattus_norvegicus
ENSSFOG00015001042	lrpprc	99	49.413	ENSRBIG00000031552	LRPPRC	99	49.931	Rhinopithecus_bieti
ENSSFOG00015001042	lrpprc	99	51.076	ENSSBOG00000011807	LRPPRC	99	54.428	Saimiri_boliviensis_boliviensis
ENSSFOG00015001042	lrpprc	93	51.935	ENSSHAG00000018725	LRPPRC	98	51.935	Sarcophilus_harrisii
ENSSFOG00015001042	lrpprc	99	56.453	ENSSDUG00000019062	lrpprc	99	56.453	Seriola_dumerili
ENSSFOG00015001042	lrpprc	92	50.505	ENSSLDG00000023028	lrpprc	97	51.515	Seriola_lalandi_dorsalis
ENSSFOG00015001042	lrpprc	90	49.237	ENSSARG00000000426	LRPPRC	99	49.237	Sorex_araneus
ENSSFOG00015001042	lrpprc	99	51.314	ENSSPAG00000000162	lrpprc	99	51.243	Stegastes_partitus
ENSSFOG00015001042	lrpprc	99	51.660	ENSSSCG00000008452	LRPPRC	99	51.660	Sus_scrofa
ENSSFOG00015001042	lrpprc	92	46.796	ENSTGUG00000003759	LRPPRC	99	46.796	Taeniopygia_guttata
ENSSFOG00015001042	lrpprc	91	55.530	ENSTRUG00000008409	lrpprc	97	55.455	Takifugu_rubripes
ENSSFOG00015001042	lrpprc	99	54.850	ENSTNIG00000007470	lrpprc	99	56.000	Tetraodon_nigroviridis
ENSSFOG00015001042	lrpprc	99	49.548	ENSTTRG00000006403	LRPPRC	99	49.550	Tursiops_truncatus
ENSSFOG00015001042	lrpprc	88	54.239	ENSVPAG00000008993	LRPPRC	94	54.239	Vicugna_pacos
ENSSFOG00015001042	lrpprc	95	54.578	ENSXETG00000009296	lrpprc	99	53.310	Xenopus_tropicalis
ENSSFOG00015001042	lrpprc	98	51.775	ENSXCOG00000013343	lrpprc	96	54.386	Xiphophorus_couchianus
ENSSFOG00015001042	lrpprc	99	55.168	ENSXMAG00000018108	lrpprc	99	55.168	Xiphophorus_maculatus