EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015001048 (Gene tree)
Gene ID: 108940100
Gene Symbol: tdrkh
Alias: TDRD2|zgc:113056
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 9527 bases
Position: chrKV411197.1:5083237-5092763
Accession: 108940100
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015001468	KH_1	PF00013.29	1.8e-14	1	1
ENSSFOP00015001478	KH_1	PF00013.29	1.8e-14	1	1
ENSSFOP00015001468	TUDOR	PF00567.24	5.7e-27	1	1
ENSSFOP00015001478	TUDOR	PF00567.24	5.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015001514	-	2479	XM_018761987	ENSSFOP00015001478	549 (aa)	XP_018617503	A0A1W5AV45
ENSSFOT00015001504	-	2311	XM_018761986	ENSSFOP00015001468	549 (aa)	XP_018617502	A0A1W5AV45

Gene Model

Click here to download ENSSFOG00015001048's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015001048's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015001048	tdrkh	100	56.050	ENSAPOG00000012653	tdrkh	100	55.694	Acanthochromis_polyacanthus
ENSSFOG00015001048	tdrkh	97	54.851	ENSACIG00000010318	tdrkh	98	54.851	Amphilophus_citrinellus
ENSSFOG00015001048	tdrkh	100	54.386	ENSAOCG00000020623	tdrkh	100	54.804	Amphiprion_ocellaris
ENSSFOG00015001048	tdrkh	100	54.561	ENSAPEG00000018388	tdrkh	100	54.982	Amphiprion_percula
ENSSFOG00015001048	tdrkh	100	57.117	ENSATEG00000023809	tdrkh	100	56.762	Anabas_testudineus
ENSSFOG00015001048	tdrkh	100	55.635	ENSACLG00000003017	tdrkh	100	55.635	Astatotilapia_calliptera
ENSSFOG00015001048	tdrkh	99	61.020	ENSAMXG00000011664	tdrkh	94	61.020	Astyanax_mexicanus
ENSSFOG00015001048	tdrkh	98	54.937	ENSCSEG00000002894	tdrkh	97	56.044	Cynoglossus_semilaevis
ENSSFOG00015001048	tdrkh	61	69.082	ENSCVAG00000020347	tdrkh	77	68.599	Cyprinodon_variegatus
ENSSFOG00015001048	tdrkh	99	61.191	ENSDARG00000053474	tdrkh	94	60.650	Danio_rerio
ENSSFOG00015001048	tdrkh	100	60.424	ENSELUG00000024537	tdrkh	94	60.071	Esox_lucius
ENSSFOG00015001048	tdrkh	100	55.000	ENSFHEG00000003544	tdrkh	100	54.741	Fundulus_heteroclitus
ENSSFOG00015001048	tdrkh	100	54.710	ENSGMOG00000009304	tdrkh	94	54.710	Gadus_morhua
ENSSFOG00015001048	tdrkh	97	54.662	ENSGAFG00000010754	tdrkh	98	53.455	Gambusia_affinis
ENSSFOG00015001048	tdrkh	100	58.303	ENSGACG00000015258	tdrkh	94	57.942	Gasterosteus_aculeatus
ENSSFOG00015001048	tdrkh	100	55.117	ENSHBUG00000017609	tdrkh	100	55.635	Haplochromis_burtoni
ENSSFOG00015001048	tdrkh	99	60.940	ENSIPUG00000009673	tdrkh	99	60.759	Ictalurus_punctatus
ENSSFOG00015001048	tdrkh	100	55.676	ENSKMAG00000016638	tdrkh	93	55.315	Kryptolebias_marmoratus
ENSSFOG00015001048	tdrkh	100	55.993	ENSLBEG00000027323	tdrkh	97	55.300	Labrus_bergylta
ENSSFOG00015001048	tdrkh	100	56.937	ENSLOCG00000011381	tdrkh	100	56.757	Lepisosteus_oculatus
ENSSFOG00015001048	tdrkh	100	56.250	ENSMAMG00000020343	tdrkh	100	56.115	Mastacembelus_armatus
ENSSFOG00015001048	tdrkh	100	55.635	ENSMZEG00005006755	tdrkh	100	55.635	Maylandia_zebra
ENSSFOG00015001048	tdrkh	95	57.905	ENSMMOG00000020663	tdrkh	88	57.663	Mola_mola
ENSSFOG00015001048	tdrkh	100	54.770	ENSMALG00000015401	tdrkh	100	54.417	Monopterus_albus
ENSSFOG00015001048	tdrkh	100	53.584	ENSNBRG00000023815	tdrkh	100	53.584	Neolamprologus_brichardi
ENSSFOG00015001048	tdrkh	100	55.676	ENSORLG00000029204	tdrkh	99	55.495	Oryzias_latipes
ENSSFOG00015001048	tdrkh	93	54.143	ENSORLG00020016168	tdrkh	97	54.335	Oryzias_latipes_hni
ENSSFOG00015001048	tdrkh	100	52.783	ENSORLG00015014094	tdrkh	99	52.962	Oryzias_latipes_hsok
ENSSFOG00015001048	tdrkh	100	54.775	ENSOMEG00000015063	tdrkh	92	54.775	Oryzias_melastigma
ENSSFOG00015001048	tdrkh	100	70.909	ENSPKIG00000017597	tdrkh	100	70.182	Paramormyrops_kingsleyae
ENSSFOG00015001048	tdrkh	97	54.898	ENSPMGG00000019362	tdrkh	97	54.281	Periophthalmus_magnuspinnatus
ENSSFOG00015001048	tdrkh	97	54.212	ENSPFOG00000013032	tdrkh	93	53.285	Poecilia_formosa
ENSSFOG00015001048	tdrkh	97	54.396	ENSPLAG00000004193	tdrkh	98	53.467	Poecilia_latipinna
ENSSFOG00015001048	tdrkh	97	54.212	ENSPMEG00000016502	tdrkh	98	53.285	Poecilia_mexicana
ENSSFOG00015001048	tdrkh	97	52.015	ENSPREG00000004213	tdrkh	93	51.565	Poecilia_reticulata
ENSSFOG00015001048	tdrkh	97	54.545	ENSPNYG00000022818	tdrkh	97	55.083	Pundamilia_nyererei
ENSSFOG00015001048	tdrkh	99	60.617	ENSPNAG00000008783	tdrkh	94	60.436	Pygocentrus_nattereri
ENSSFOG00015001048	tdrkh	100	56.172	ENSSMAG00000001532	tdrkh	100	55.814	Scophthalmus_maximus
ENSSFOG00015001048	tdrkh	100	56.714	ENSSDUG00000013393	tdrkh	100	56.184	Seriola_dumerili
ENSSFOG00015001048	tdrkh	100	57.067	ENSSLDG00000017418	tdrkh	100	56.360	Seriola_lalandi_dorsalis
ENSSFOG00015001048	tdrkh	100	56.328	ENSSPAG00000006435	tdrkh	95	55.971	Stegastes_partitus
ENSSFOG00015001048	tdrkh	97	52.855	ENSTRUG00000006644	tdrkh	97	52.855	Takifugu_rubripes
ENSSFOG00015001048	tdrkh	99	55.000	ENSTNIG00000003157	tdrkh	99	54.821	Tetraodon_nigroviridis
ENSSFOG00015001048	tdrkh	85	56.579	ENSXCOG00000016972	tdrkh	90	68.908	Xiphophorus_couchianus
ENSSFOG00015001048	tdrkh	97	52.747	ENSXMAG00000014756	tdrkh	98	52.118	Xiphophorus_maculatus