EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015001103 (Gene tree)
Gene ID: 108936500
Gene Symbol: snd1
Alias: SN4TDR|TDRD11|p100L|p100S|wu:fc27g10
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 173542 bases
Position: chrKV411121.1:7072002-7245543
Accession: 108936500
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015001702	TUDOR	PF00567.24	8.4e-24	1	1
ENSSFOP00015001702	SNase	PF00565.17	1.8e-67	1	5
ENSSFOP00015001702	SNase	PF00565.17	1.8e-67	2	5
ENSSFOP00015001702	SNase	PF00565.17	1.8e-67	3	5
ENSSFOP00015001702	SNase	PF00565.17	1.8e-67	4	5
ENSSFOP00015001702	SNase	PF00565.17	1.8e-67	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015001741	-	3765	XM_018755882	ENSSFOP00015001702	919 (aa)	XP_018611398	-

Gene Model

Click here to download ENSSFOG00015001103's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015001103's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015001103	snd1	98	83.241	ENSG00000197157	SND1	100	82.155	Homo_sapiens
ENSSFOG00015001103	snd1	99	87.473	ENSAPOG00000017599	snd1	98	88.137	Acanthochromis_polyacanthus
ENSSFOG00015001103	snd1	100	82.302	ENSAMEG00000004664	SND1	94	82.302	Ailuropoda_melanoleuca
ENSSFOG00015001103	snd1	98	85.477	ENSACIG00000003551	snd1	98	85.477	Amphilophus_citrinellus
ENSSFOG00015001103	snd1	99	87.691	ENSAOCG00000014166	snd1	98	88.359	Amphiprion_ocellaris
ENSSFOG00015001103	snd1	99	87.691	ENSAPEG00000007067	snd1	98	88.359	Amphiprion_percula
ENSSFOG00015001103	snd1	98	87.680	ENSATEG00000018475	snd1	88	88.362	Anabas_testudineus
ENSSFOG00015001103	snd1	98	83.574	ENSANAG00000034463	SND1	99	83.557	Aotus_nancymaae
ENSSFOG00015001103	snd1	99	86.819	ENSACLG00000022897	snd1	98	87.694	Astatotilapia_calliptera
ENSSFOG00015001103	snd1	100	89.119	ENSAMXG00000016318	snd1	98	89.900	Astyanax_mexicanus
ENSSFOG00015001103	snd1	98	83.463	ENSBTAG00000010692	SND1	100	82.372	Bos_taurus
ENSSFOG00015001103	snd1	99	47.009	WBGene00006626	tsn-1	97	47.650	Caenorhabditis_elegans
ENSSFOG00015001103	snd1	98	83.352	ENSCJAG00000017668	SND1	99	83.333	Callithrix_jacchus
ENSSFOG00015001103	snd1	100	82.481	ENSCAFG00000001700	SND1	100	82.481	Canis_familiaris
ENSSFOG00015001103	snd1	100	82.481	ENSCAFG00020021639	SND1	100	82.481	Canis_lupus_dingo
ENSSFOG00015001103	snd1	98	83.574	ENSCHIG00000023390	SND1	100	82.481	Capra_hircus
ENSSFOG00015001103	snd1	72	86.308	ENSTSYG00000004979	SND1	96	86.308	Carlito_syrichta
ENSSFOG00015001103	snd1	97	73.408	ENSCAPG00000010677	SND1	97	73.408	Cavia_aperea
ENSSFOG00015001103	snd1	98	83.241	ENSCPOG00000006251	SND1	100	82.155	Cavia_porcellus
ENSSFOG00015001103	snd1	98	83.574	ENSCCAG00000036847	SND1	100	82.481	Cebus_capucinus
ENSSFOG00015001103	snd1	98	83.463	ENSCATG00000035214	SND1	99	83.557	Cercocebus_atys
ENSSFOG00015001103	snd1	98	83.463	ENSCLAG00000011796	SND1	100	82.372	Chinchilla_lanigera
ENSSFOG00015001103	snd1	98	83.463	ENSCSAG00000010182	SND1	100	82.372	Chlorocebus_sabaeus
ENSSFOG00015001103	snd1	78	71.287	ENSCHOG00000002218	SND1	86	71.287	Choloepus_hoffmanni
ENSSFOG00015001103	snd1	100	82.916	ENSCPBG00000018094	SND1	98	83.685	Chrysemys_picta_bellii
ENSSFOG00015001103	snd1	98	56.167	ENSCING00000000524	-	98	56.167	Ciona_intestinalis
ENSSFOG00015001103	snd1	99	56.678	ENSCSAVG00000008807	-	98	57.143	Ciona_savignyi
ENSSFOG00015001103	snd1	98	83.463	ENSCANG00000035119	SND1	100	82.372	Colobus_angolensis_palliatus
ENSSFOG00015001103	snd1	98	82.908	ENSCGRG00001022514	Snd1	100	81.828	Cricetulus_griseus_chok1gshd
ENSSFOG00015001103	snd1	97	82.979	ENSCGRG00000012277	Snd1	99	82.979	Cricetulus_griseus_crigri
ENSSFOG00015001103	snd1	99	86.166	ENSCSEG00000008661	snd1	98	86.918	Cynoglossus_semilaevis
ENSSFOG00015001103	snd1	99	87.582	ENSCVAG00000010316	snd1	100	87.358	Cyprinodon_variegatus
ENSSFOG00015001103	snd1	100	87.486	ENSDARG00000006766	snd1	98	90.283	Danio_rerio
ENSSFOG00015001103	snd1	97	81.229	ENSDNOG00000006795	SND1	99	81.229	Dasypus_novemcinctus
ENSSFOG00015001103	snd1	98	83.130	ENSDORG00000000336	Snd1	100	82.046	Dipodomys_ordii
ENSSFOG00015001103	snd1	98	50.593	FBgn0035121	Tudor-SN	97	50.763	Drosophila_melanogaster
ENSSFOG00015001103	snd1	90	80.556	ENSETEG00000000375	SND1	92	80.556	Echinops_telfairi
ENSSFOG00015001103	snd1	58	66.402	ENSEBUG00000014201	-	84	74.866	Eptatretus_burgeri
ENSSFOG00015001103	snd1	98	82.475	ENSEASG00005008513	SND1	100	81.418	Equus_asinus_asinus
ENSSFOG00015001103	snd1	98	83.352	ENSECAG00000011451	SND1	100	82.263	Equus_caballus
ENSSFOG00015001103	snd1	98	74.473	ENSEEUG00000014737	SND1	100	73.449	Erinaceus_europaeus
ENSSFOG00015001103	snd1	99	85.932	ENSELUG00000001805	snd1	96	85.932	Esox_lucius
ENSSFOG00015001103	snd1	100	82.372	ENSFCAG00000008289	SND1	100	82.372	Felis_catus
ENSSFOG00015001103	snd1	98	83.574	ENSFDAG00000015881	SND1	100	82.481	Fukomys_damarensis
ENSSFOG00015001103	snd1	99	85.486	ENSFHEG00000004093	snd1	97	88.439	Fundulus_heteroclitus
ENSSFOG00015001103	snd1	75	78.249	ENSGMOG00000018932	snd1	66	78.249	Gadus_morhua
ENSSFOG00015001103	snd1	99	87.800	ENSGAFG00000008421	snd1	99	88.702	Gambusia_affinis
ENSSFOG00015001103	snd1	99	56.559	ENSGACG00000019793	snd1	98	56.565	Gasterosteus_aculeatus
ENSSFOG00015001103	snd1	98	83.463	ENSGGOG00000009614	SND1	99	83.445	Gorilla_gorilla
ENSSFOG00015001103	snd1	99	86.928	ENSHBUG00000019135	snd1	98	87.805	Haplochromis_burtoni
ENSSFOG00015001103	snd1	98	83.019	ENSHGLG00000003618	SND1	100	81.937	Heterocephalus_glaber_female
ENSSFOG00015001103	snd1	98	83.019	ENSHGLG00100012449	SND1	99	83.019	Heterocephalus_glaber_male
ENSSFOG00015001103	snd1	99	86.710	ENSHCOG00000005266	snd1	98	87.251	Hippocampus_comes
ENSSFOG00015001103	snd1	100	88.466	ENSIPUG00000013279	snd1	100	88.466	Ictalurus_punctatus
ENSSFOG00015001103	snd1	98	83.463	ENSSTOG00000002140	SND1	100	82.372	Ictidomys_tridecemlineatus
ENSSFOG00015001103	snd1	98	83.463	ENSJJAG00000009561	Snd1	100	82.372	Jaculus_jaculus
ENSSFOG00015001103	snd1	99	88.344	ENSKMAG00000016997	snd1	98	88.914	Kryptolebias_marmoratus
ENSSFOG00015001103	snd1	99	89.369	ENSLBEG00000013563	snd1	98	87.140	Labrus_bergylta
ENSSFOG00015001103	snd1	98	88.962	ENSLOCG00000015537	snd1	100	88.587	Lepisosteus_oculatus
ENSSFOG00015001103	snd1	100	81.937	ENSLAFG00000009696	SND1	100	81.937	Loxodonta_africana
ENSSFOG00015001103	snd1	98	83.463	ENSMFAG00000038114	SND1	99	83.557	Macaca_fascicularis
ENSSFOG00015001103	snd1	98	83.463	ENSMMUG00000015432	SND1	100	82.372	Macaca_mulatta
ENSSFOG00015001103	snd1	98	83.463	ENSMNEG00000039808	SND1	97	86.411	Macaca_nemestrina
ENSSFOG00015001103	snd1	98	83.352	ENSMLEG00000029040	SND1	97	86.411	Mandrillus_leucophaeus
ENSSFOG00015001103	snd1	99	87.364	ENSMAMG00000011739	snd1	98	88.248	Mastacembelus_armatus
ENSSFOG00015001103	snd1	99	86.819	ENSMZEG00005005681	snd1	98	87.694	Maylandia_zebra
ENSSFOG00015001103	snd1	98	83.352	ENSMICG00000000097	SND1	100	82.263	Microcebus_murinus
ENSSFOG00015001103	snd1	98	83.241	ENSMOCG00000005040	Snd1	100	82.155	Microtus_ochrogaster
ENSSFOG00015001103	snd1	99	87.582	ENSMMOG00000001795	snd1	98	88.470	Mola_mola
ENSSFOG00015001103	snd1	98	82.686	ENSMODG00000015182	SND1	100	81.610	Monodelphis_domestica
ENSSFOG00015001103	snd1	99	88.344	ENSMALG00000012071	snd1	98	89.024	Monopterus_albus
ENSSFOG00015001103	snd1	98	82.908	MGP_CAROLIEiJ_G0028159	Snd1	99	83.555	Mus_caroli
ENSSFOG00015001103	snd1	98	82.686	ENSMUSG00000001424	Snd1	100	81.610	Mus_musculus
ENSSFOG00015001103	snd1	98	82.908	MGP_PahariEiJ_G0021917	Snd1	100	83.555	Mus_pahari
ENSSFOG00015001103	snd1	98	82.908	MGP_SPRETEiJ_G0029159	Snd1	100	81.828	Mus_spretus
ENSSFOG00015001103	snd1	100	82.372	ENSMPUG00000006545	SND1	100	82.372	Mustela_putorius_furo
ENSSFOG00015001103	snd1	97	82.522	ENSMLUG00000017130	SND1	99	82.522	Myotis_lucifugus
ENSSFOG00015001103	snd1	98	83.574	ENSNGAG00000011186	Snd1	100	82.481	Nannospalax_galili
ENSSFOG00015001103	snd1	99	87.037	ENSNBRG00000006681	snd1	98	87.916	Neolamprologus_brichardi
ENSSFOG00015001103	snd1	100	82.372	ENSNLEG00000012263	SND1	99	84.551	Nomascus_leucogenys
ENSSFOG00015001103	snd1	91	80.556	ENSOPRG00000013405	SND1	92	80.556	Ochotona_princeps
ENSSFOG00015001103	snd1	98	83.685	ENSODEG00000011502	SND1	98	83.685	Octodon_degus
ENSSFOG00015001103	snd1	99	87.255	ENSONIG00000011481	snd1	96	88.137	Oreochromis_niloticus
ENSSFOG00015001103	snd1	98	82.832	ENSOANG00000000817	SND1	98	82.832	Ornithorhynchus_anatinus
ENSSFOG00015001103	snd1	100	81.828	ENSOCUG00000001620	SND1	100	81.828	Oryctolagus_cuniculus
ENSSFOG00015001103	snd1	98	87.694	ENSORLG00000015201	snd1	98	87.694	Oryzias_latipes
ENSSFOG00015001103	snd1	98	87.916	ENSORLG00020013991	snd1	98	87.916	Oryzias_latipes_hni
ENSSFOG00015001103	snd1	98	87.916	ENSORLG00015012436	snd1	98	87.916	Oryzias_latipes_hsok
ENSSFOG00015001103	snd1	99	87.582	ENSOMEG00000006406	snd1	98	88.359	Oryzias_melastigma
ENSSFOG00015001103	snd1	98	83.278	ENSOGAG00000013356	SND1	94	82.193	Otolemur_garnettii
ENSSFOG00015001103	snd1	97	81.299	ENSOARG00000002149	SND1	99	81.299	Ovis_aries
ENSSFOG00015001103	snd1	99	82.561	ENSPPAG00000042947	SND1	99	83.333	Pan_paniscus
ENSSFOG00015001103	snd1	100	82.372	ENSPPRG00000004494	SND1	100	82.372	Panthera_pardus
ENSSFOG00015001103	snd1	100	82.263	ENSPTIG00000014214	SND1	100	82.263	Panthera_tigris_altaica
ENSSFOG00015001103	snd1	99	82.561	ENSPTRG00000023911	SND1	99	83.333	Pan_troglodytes
ENSSFOG00015001103	snd1	97	83.557	ENSPANG00000011997	SND1	99	83.557	Papio_anubis
ENSSFOG00015001103	snd1	99	89.097	ENSPKIG00000023494	snd1	100	89.010	Paramormyrops_kingsleyae
ENSSFOG00015001103	snd1	92	87.915	ENSPMGG00000003629	snd1	100	87.915	Periophthalmus_magnuspinnatus
ENSSFOG00015001103	snd1	98	83.130	ENSPEMG00000010240	Snd1	100	82.046	Peromyscus_maniculatus_bairdii
ENSSFOG00015001103	snd1	97	74.916	ENSPMAG00000007915	-	99	74.916	Petromyzon_marinus
ENSSFOG00015001103	snd1	98	83.352	ENSPCIG00000011561	SND1	100	82.263	Phascolarctos_cinereus
ENSSFOG00015001103	snd1	99	87.146	ENSPFOG00000001557	snd1	98	88.027	Poecilia_formosa
ENSSFOG00015001103	snd1	99	87.364	ENSPLAG00000018459	snd1	95	88.248	Poecilia_latipinna
ENSSFOG00015001103	snd1	99	87.364	ENSPMEG00000006803	snd1	98	88.248	Poecilia_mexicana
ENSSFOG00015001103	snd1	99	87.146	ENSPREG00000002189	snd1	98	87.916	Poecilia_reticulata
ENSSFOG00015001103	snd1	91	83.563	ENSPPYG00000017972	SND1	100	82.331	Pongo_abelii
ENSSFOG00015001103	snd1	98	73.807	ENSPCAG00000011305	SND1	100	72.797	Procavia_capensis
ENSSFOG00015001103	snd1	98	83.352	ENSPCOG00000026791	SND1	99	83.427	Propithecus_coquereli
ENSSFOG00015001103	snd1	98	81.576	ENSPVAG00000013945	SND1	100	80.522	Pteropus_vampyrus
ENSSFOG00015001103	snd1	99	86.710	ENSPNYG00000000932	snd1	98	87.583	Pundamilia_nyererei
ENSSFOG00015001103	snd1	100	89.010	ENSPNAG00000001206	snd1	98	89.900	Pygocentrus_nattereri
ENSSFOG00015001103	snd1	98	83.130	ENSRNOG00000031173	Snd1	98	83.130	Rattus_norvegicus
ENSSFOG00015001103	snd1	72	86.481	ENSRBIG00000027782	-	93	86.542	Rhinopithecus_bieti
ENSSFOG00015001103	snd1	98	83.463	ENSRROG00000033020	SND1	100	82.372	Rhinopithecus_roxellana
ENSSFOG00015001103	snd1	98	83.574	ENSSBOG00000032461	SND1	99	83.557	Saimiri_boliviensis_boliviensis
ENSSFOG00015001103	snd1	98	80.645	ENSSHAG00000015359	SND1	100	80.645	Sarcophilus_harrisii
ENSSFOG00015001103	snd1	98	87.251	ENSSMAG00000001932	snd1	93	87.251	Scophthalmus_maximus
ENSSFOG00015001103	snd1	99	87.146	ENSSDUG00000002699	snd1	92	87.916	Seriola_dumerili
ENSSFOG00015001103	snd1	99	80.065	ENSSLDG00000001950	snd1	98	80.710	Seriola_lalandi_dorsalis
ENSSFOG00015001103	snd1	86	83.962	ENSSARG00000004877	SND1	92	83.962	Sorex_araneus
ENSSFOG00015001103	snd1	72	79.145	ENSSPUG00000017586	SND1	96	79.145	Sphenodon_punctatus
ENSSFOG00015001103	snd1	73	88.462	ENSSPAG00000021398	snd1	96	89.691	Stegastes_partitus
ENSSFOG00015001103	snd1	98	83.241	ENSSSCG00000016590	SND1	100	82.155	Sus_scrofa
ENSSFOG00015001103	snd1	99	85.839	ENSTRUG00000014067	snd1	98	86.696	Takifugu_rubripes
ENSSFOG00015001103	snd1	99	86.166	ENSTNIG00000011019	snd1	98	87.140	Tetraodon_nigroviridis
ENSSFOG00015001103	snd1	93	78.413	ENSTBEG00000003999	SND1	100	78.413	Tupaia_belangeri
ENSSFOG00015001103	snd1	98	79.578	ENSTTRG00000006059	SND1	100	78.564	Tursiops_truncatus
ENSSFOG00015001103	snd1	87	82.453	ENSUAMG00000005604	-	93	82.453	Ursus_americanus
ENSSFOG00015001103	snd1	68	74.485	ENSUAMG00000002820	-	90	74.485	Ursus_americanus
ENSSFOG00015001103	snd1	100	82.372	ENSUMAG00000005960	SND1	100	82.372	Ursus_maritimus
ENSSFOG00015001103	snd1	77	80.556	ENSVPAG00000008302	SND1	74	80.556	Vicugna_pacos
ENSSFOG00015001103	snd1	100	82.481	ENSVVUG00000007226	SND1	100	82.481	Vulpes_vulpes
ENSSFOG00015001103	snd1	97	79.754	ENSXETG00000023043	snd1	100	80.457	Xenopus_tropicalis
ENSSFOG00015001103	snd1	92	86.000	ENSXCOG00000013629	snd1	99	86.000	Xiphophorus_couchianus
ENSSFOG00015001103	snd1	99	88.017	ENSXMAG00000011469	snd1	98	88.803	Xiphophorus_maculatus