EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015001108 (Gene tree)
Gene ID: 108922428
Gene Symbol: sbds
Alias: zgc:56700
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 5370 bases
Position: chrKV410815.1:136289-141658
Accession: 108922428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015001587	SBDS	PF01172.18	1.6e-34	1	1
ENSSFOP00015001587	SBDS_C	PF09377.10	3.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015001625	-	2125	XM_018732534	ENSSFOP00015001587	250 (aa)	XP_018588050	A0A0P7UQ99

Gene Model

Click here to download ENSSFOG00015001108's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015001108's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015001108	sbds	100	85.600	ENSG00000126524	SBDS	100	85.600	Homo_sapiens
ENSSFOG00015001108	sbds	99	92.771	ENSAPOG00000014285	sbds	100	92.771	Acanthochromis_polyacanthus
ENSSFOG00015001108	sbds	100	85.600	ENSAMEG00000018167	SBDS	100	85.600	Ailuropoda_melanoleuca
ENSSFOG00015001108	sbds	99	91.667	ENSACIG00000007308	sbds	100	91.667	Amphilophus_citrinellus
ENSSFOG00015001108	sbds	99	93.574	ENSAOCG00000016770	sbds	100	93.574	Amphiprion_ocellaris
ENSSFOG00015001108	sbds	99	93.173	ENSAPEG00000015897	sbds	100	93.173	Amphiprion_percula
ENSSFOG00015001108	sbds	99	93.173	ENSATEG00000006901	sbds	100	93.173	Anabas_testudineus
ENSSFOG00015001108	sbds	83	85.024	ENSANAG00000037501	-	100	85.024	Aotus_nancymaae
ENSSFOG00015001108	sbds	92	80.087	ENSANAG00000024342	-	97	80.087	Aotus_nancymaae
ENSSFOG00015001108	sbds	99	92.771	ENSACLG00000018750	sbds	100	92.771	Astatotilapia_calliptera
ENSSFOG00015001108	sbds	100	94.000	ENSAMXG00000005361	sbds	100	94.000	Astyanax_mexicanus
ENSSFOG00015001108	sbds	100	85.600	ENSBTAG00000004051	SBDS	100	85.600	Bos_taurus
ENSSFOG00015001108	sbds	98	59.756	WBGene00021063	sbds-1	97	59.756	Caenorhabditis_elegans
ENSSFOG00015001108	sbds	100	85.600	ENSCJAG00000041007	SBDS	100	85.600	Callithrix_jacchus
ENSSFOG00015001108	sbds	100	83.730	ENSCAFG00000010797	SBDS	100	83.730	Canis_familiaris
ENSSFOG00015001108	sbds	100	85.600	ENSCAFG00020005357	SBDS	100	85.600	Canis_lupus_dingo
ENSSFOG00015001108	sbds	100	85.600	ENSCHIG00000026854	SBDS	100	85.600	Capra_hircus
ENSSFOG00015001108	sbds	100	85.600	ENSTSYG00000033822	SBDS	100	85.600	Carlito_syrichta
ENSSFOG00015001108	sbds	66	86.585	ENSCAPG00000006634	SBDS	100	86.585	Cavia_aperea
ENSSFOG00015001108	sbds	100	86.400	ENSCPOG00000036143	SBDS	100	86.400	Cavia_porcellus
ENSSFOG00015001108	sbds	100	85.600	ENSCCAG00000020671	SBDS	100	85.600	Cebus_capucinus
ENSSFOG00015001108	sbds	100	85.600	ENSCATG00000039026	SBDS	100	85.600	Cercocebus_atys
ENSSFOG00015001108	sbds	99	61.290	ENSCLAG00000002113	-	99	61.290	Chinchilla_lanigera
ENSSFOG00015001108	sbds	100	86.800	ENSCLAG00000005721	-	100	86.800	Chinchilla_lanigera
ENSSFOG00015001108	sbds	100	85.600	ENSCSAG00000018275	SBDS	100	85.600	Chlorocebus_sabaeus
ENSSFOG00015001108	sbds	100	80.800	ENSCHOG00000003795	SBDS	100	80.800	Choloepus_hoffmanni
ENSSFOG00015001108	sbds	100	91.200	ENSCPBG00000014893	SBDS	100	91.200	Chrysemys_picta_bellii
ENSSFOG00015001108	sbds	99	67.742	ENSCSAVG00000011811	-	99	67.742	Ciona_savignyi
ENSSFOG00015001108	sbds	100	85.200	ENSCANG00000032368	SBDS	100	85.200	Colobus_angolensis_palliatus
ENSSFOG00015001108	sbds	66	85.366	ENSCGRG00001019886	Sbds	100	85.366	Cricetulus_griseus_chok1gshd
ENSSFOG00015001108	sbds	83	85.024	ENSCGRG00000009211	Sbds	100	85.024	Cricetulus_griseus_crigri
ENSSFOG00015001108	sbds	99	91.566	ENSCSEG00000005798	sbds	100	91.566	Cynoglossus_semilaevis
ENSSFOG00015001108	sbds	99	88.755	ENSCVAG00000001053	sbds	100	88.755	Cyprinodon_variegatus
ENSSFOG00015001108	sbds	100	93.200	ENSDARG00000027803	sbds	100	93.200	Danio_rerio
ENSSFOG00015001108	sbds	100	85.600	ENSDNOG00000041174	SBDS	100	85.600	Dasypus_novemcinctus
ENSSFOG00015001108	sbds	100	86.800	ENSDORG00000026218	Sbds	100	86.800	Dipodomys_ordii
ENSSFOG00015001108	sbds	90	62.719	FBgn0035714	CG8549	98	62.753	Drosophila_melanogaster
ENSSFOG00015001108	sbds	93	60.515	ENSEBUG00000015780	sbds	100	60.515	Eptatretus_burgeri
ENSSFOG00015001108	sbds	100	85.600	ENSEASG00005008821	SBDS	100	85.600	Equus_asinus_asinus
ENSSFOG00015001108	sbds	100	85.600	ENSECAG00000008202	SBDS	100	85.600	Equus_caballus
ENSSFOG00015001108	sbds	83	66.346	ENSEEUG00000004768	SBDS	100	66.346	Erinaceus_europaeus
ENSSFOG00015001108	sbds	100	89.600	ENSELUG00000008382	sbds	100	89.600	Esox_lucius
ENSSFOG00015001108	sbds	100	85.200	ENSFCAG00000022142	SBDS	100	85.200	Felis_catus
ENSSFOG00015001108	sbds	100	90.400	ENSFALG00000013808	SBDS	100	90.400	Ficedula_albicollis
ENSSFOG00015001108	sbds	100	86.400	ENSFDAG00000018947	-	100	86.400	Fukomys_damarensis
ENSSFOG00015001108	sbds	99	86.747	ENSFHEG00000000708	sbds	100	86.747	Fundulus_heteroclitus
ENSSFOG00015001108	sbds	100	89.600	ENSGMOG00000018356	sbds	99	89.600	Gadus_morhua
ENSSFOG00015001108	sbds	100	88.800	ENSGALG00000027989	SBDS	100	88.800	Gallus_gallus
ENSSFOG00015001108	sbds	92	86.087	ENSGAFG00000014204	sbds	100	86.087	Gambusia_affinis
ENSSFOG00015001108	sbds	99	88.755	ENSGACG00000012697	sbds	100	88.755	Gasterosteus_aculeatus
ENSSFOG00015001108	sbds	86	91.589	ENSGAGG00000022402	SBDS	100	91.589	Gopherus_agassizii
ENSSFOG00015001108	sbds	96	67.635	ENSGGOG00000040023	-	92	67.635	Gorilla_gorilla
ENSSFOG00015001108	sbds	99	92.771	ENSHBUG00000002660	sbds	100	92.771	Haplochromis_burtoni
ENSSFOG00015001108	sbds	100	84.800	ENSHGLG00000009671	SBDS	100	84.800	Heterocephalus_glaber_female
ENSSFOG00015001108	sbds	100	84.800	ENSHGLG00100011332	SBDS	100	84.800	Heterocephalus_glaber_male
ENSSFOG00015001108	sbds	99	87.952	ENSHCOG00000018606	sbds	100	87.952	Hippocampus_comes
ENSSFOG00015001108	sbds	100	93.600	ENSIPUG00000006536	sbds	100	93.600	Ictalurus_punctatus
ENSSFOG00015001108	sbds	100	61.660	ENSJJAG00000003934	-	100	61.660	Jaculus_jaculus
ENSSFOG00015001108	sbds	100	83.200	ENSJJAG00000012033	-	100	83.200	Jaculus_jaculus
ENSSFOG00015001108	sbds	99	91.165	ENSKMAG00000018542	sbds	100	91.165	Kryptolebias_marmoratus
ENSSFOG00015001108	sbds	99	90.763	ENSLBEG00000016687	sbds	100	90.763	Labrus_bergylta
ENSSFOG00015001108	sbds	100	78.740	ENSLACG00000018916	SBDS	100	78.740	Latimeria_chalumnae
ENSSFOG00015001108	sbds	100	94.800	ENSLOCG00000004073	sbds	100	94.800	Lepisosteus_oculatus
ENSSFOG00015001108	sbds	100	85.600	ENSLAFG00000008763	SBDS	100	85.600	Loxodonta_africana
ENSSFOG00015001108	sbds	100	85.600	ENSMFAG00000032620	SBDS	100	85.600	Macaca_fascicularis
ENSSFOG00015001108	sbds	100	85.600	ENSMMUG00000045653	SBDS	100	85.600	Macaca_mulatta
ENSSFOG00015001108	sbds	100	85.600	ENSMNEG00000031523	SBDS	100	85.600	Macaca_nemestrina
ENSSFOG00015001108	sbds	100	66.929	ENSMLEG00000036826	SBDS	100	66.929	Mandrillus_leucophaeus
ENSSFOG00015001108	sbds	99	91.968	ENSMAMG00000016062	sbds	100	91.968	Mastacembelus_armatus
ENSSFOG00015001108	sbds	99	92.771	ENSMZEG00005024385	sbds	100	92.771	Maylandia_zebra
ENSSFOG00015001108	sbds	100	88.800	ENSMGAG00000002119	SBDS	100	88.800	Meleagris_gallopavo
ENSSFOG00015001108	sbds	99	69.478	ENSMAUG00000022214	-	100	69.478	Mesocricetus_auratus
ENSSFOG00015001108	sbds	100	85.600	ENSMICG00000014366	SBDS	100	85.600	Microcebus_murinus
ENSSFOG00015001108	sbds	100	86.000	ENSMOCG00000011739	Sbds	100	86.000	Microtus_ochrogaster
ENSSFOG00015001108	sbds	99	82.000	ENSMMOG00000005061	sbds	100	82.000	Mola_mola
ENSSFOG00015001108	sbds	100	86.800	ENSMODG00000006644	SBDS	100	86.800	Monodelphis_domestica
ENSSFOG00015001108	sbds	99	88.755	ENSMALG00000010219	sbds	100	88.755	Monopterus_albus
ENSSFOG00015001108	sbds	100	86.800	MGP_CAROLIEiJ_G0027800	Sbds	98	92.857	Mus_caroli
ENSSFOG00015001108	sbds	100	86.400	ENSMUSG00000025337	Sbds	98	92.857	Mus_musculus
ENSSFOG00015001108	sbds	100	86.800	MGP_PahariEiJ_G0024384	Sbds	98	92.857	Mus_pahari
ENSSFOG00015001108	sbds	100	86.400	MGP_SPRETEiJ_G0028798	Sbds	98	92.857	Mus_spretus
ENSSFOG00015001108	sbds	67	86.905	ENSMPUG00000016192	SBDS	97	86.905	Mustela_putorius_furo
ENSSFOG00015001108	sbds	73	83.516	ENSMLUG00000013575	SBDS	100	83.516	Myotis_lucifugus
ENSSFOG00015001108	sbds	100	86.800	ENSNGAG00000012093	Sbds	100	86.800	Nannospalax_galili
ENSSFOG00015001108	sbds	99	92.771	ENSNBRG00000017027	sbds	100	92.771	Neolamprologus_brichardi
ENSSFOG00015001108	sbds	100	85.600	ENSNLEG00000013288	SBDS	100	85.600	Nomascus_leucogenys
ENSSFOG00015001108	sbds	100	85.200	ENSOPRG00000008721	SBDS	100	85.200	Ochotona_princeps
ENSSFOG00015001108	sbds	100	78.000	ENSODEG00000019253	-	84	78.000	Octodon_degus
ENSSFOG00015001108	sbds	99	67.871	ENSODEG00000001116	-	99	67.871	Octodon_degus
ENSSFOG00015001108	sbds	99	66.667	ENSODEG00000000137	-	85	69.600	Octodon_degus
ENSSFOG00015001108	sbds	99	91.968	ENSONIG00000005874	sbds	100	91.968	Oreochromis_niloticus
ENSSFOG00015001108	sbds	83	82.609	ENSOANG00000007674	-	100	82.609	Ornithorhynchus_anatinus
ENSSFOG00015001108	sbds	100	86.400	ENSOCUG00000003170	SBDS	100	86.400	Oryctolagus_cuniculus
ENSSFOG00015001108	sbds	99	89.558	ENSORLG00000023489	sbds	100	89.558	Oryzias_latipes
ENSSFOG00015001108	sbds	99	88.755	ENSORLG00020019282	sbds	100	88.755	Oryzias_latipes_hni
ENSSFOG00015001108	sbds	99	88.755	ENSORLG00015008005	sbds	100	88.755	Oryzias_latipes_hsok
ENSSFOG00015001108	sbds	99	89.157	ENSOMEG00000022747	sbds	100	89.157	Oryzias_melastigma
ENSSFOG00015001108	sbds	100	72.800	ENSOGAG00000015036	-	100	72.800	Otolemur_garnettii
ENSSFOG00015001108	sbds	100	86.000	ENSOGAG00000009011	-	100	86.000	Otolemur_garnettii
ENSSFOG00015001108	sbds	100	85.600	ENSOARG00000010609	SBDS	100	85.600	Ovis_aries
ENSSFOG00015001108	sbds	100	84.800	ENSPPAG00000043889	-	100	84.800	Pan_paniscus
ENSSFOG00015001108	sbds	100	85.200	ENSPPRG00000002307	SBDS	100	85.200	Panthera_pardus
ENSSFOG00015001108	sbds	100	85.200	ENSPTIG00000021308	SBDS	100	85.200	Panthera_tigris_altaica
ENSSFOG00015001108	sbds	87	82.949	ENSPTRG00000048174	-	96	82.949	Pan_troglodytes
ENSSFOG00015001108	sbds	100	85.600	ENSPTRG00000019254	SBDS	100	85.600	Pan_troglodytes
ENSSFOG00015001108	sbds	100	72.800	ENSPTRG00000050835	-	100	72.800	Pan_troglodytes
ENSSFOG00015001108	sbds	100	72.800	ENSPTRG00000047744	-	100	72.800	Pan_troglodytes
ENSSFOG00015001108	sbds	100	85.200	ENSPANG00000004078	SBDS	100	85.200	Papio_anubis
ENSSFOG00015001108	sbds	100	96.000	ENSPKIG00000006489	sbds	100	96.000	Paramormyrops_kingsleyae
ENSSFOG00015001108	sbds	83	90.385	ENSPSIG00000014603	SBDS	100	90.385	Pelodiscus_sinensis
ENSSFOG00015001108	sbds	99	91.566	ENSPMGG00000004246	sbds	100	91.566	Periophthalmus_magnuspinnatus
ENSSFOG00015001108	sbds	100	86.800	ENSPEMG00000008728	Sbds	100	86.800	Peromyscus_maniculatus_bairdii
ENSSFOG00015001108	sbds	100	87.200	ENSPCIG00000029718	SBDS	100	87.200	Phascolarctos_cinereus
ENSSFOG00015001108	sbds	99	88.755	ENSPFOG00000015837	sbds	100	88.755	Poecilia_formosa
ENSSFOG00015001108	sbds	99	89.157	ENSPLAG00000003641	sbds	100	89.157	Poecilia_latipinna
ENSSFOG00015001108	sbds	99	88.755	ENSPMEG00000019483	sbds	100	88.755	Poecilia_mexicana
ENSSFOG00015001108	sbds	99	88.755	ENSPREG00000018758	sbds	100	88.755	Poecilia_reticulata
ENSSFOG00015001108	sbds	100	85.600	ENSPPYG00000017513	SBDS	100	85.600	Pongo_abelii
ENSSFOG00015001108	sbds	100	85.200	ENSPCOG00000021098	SBDS	100	85.200	Propithecus_coquereli
ENSSFOG00015001108	sbds	100	86.000	ENSPVAG00000009369	SBDS	100	86.000	Pteropus_vampyrus
ENSSFOG00015001108	sbds	99	92.369	ENSPNYG00000022403	sbds	100	92.369	Pundamilia_nyererei
ENSSFOG00015001108	sbds	100	94.400	ENSPNAG00000001120	sbds	100	94.400	Pygocentrus_nattereri
ENSSFOG00015001108	sbds	100	86.400	ENSRNOG00000000888	Sbds	100	86.400	Rattus_norvegicus
ENSSFOG00015001108	sbds	100	85.600	ENSRBIG00000035557	SBDS	100	85.600	Rhinopithecus_bieti
ENSSFOG00015001108	sbds	100	85.600	ENSRROG00000040842	-	100	85.600	Rhinopithecus_roxellana
ENSSFOG00015001108	sbds	100	69.200	ENSRROG00000041986	-	100	67.200	Rhinopithecus_roxellana
ENSSFOG00015001108	sbds	96	43.902	YLR022C	-	96	42.449	Saccharomyces_cerevisiae
ENSSFOG00015001108	sbds	93	83.621	ENSSBOG00000022460	SBDS	100	83.621	Saimiri_boliviensis_boliviensis
ENSSFOG00015001108	sbds	100	76.400	ENSSHAG00000010263	SBDS	100	76.400	Sarcophilus_harrisii
ENSSFOG00015001108	sbds	99	89.558	ENSSMAG00000020506	sbds	100	89.558	Scophthalmus_maximus
ENSSFOG00015001108	sbds	99	91.566	ENSSDUG00000001528	sbds	100	91.566	Seriola_dumerili
ENSSFOG00015001108	sbds	99	91.165	ENSSLDG00000003659	sbds	100	91.165	Seriola_lalandi_dorsalis
ENSSFOG00015001108	sbds	61	88.235	ENSSARG00000013132	-	100	88.235	Sorex_araneus
ENSSFOG00015001108	sbds	73	87.209	ENSSARG00000001899	-	73	87.209	Sorex_araneus
ENSSFOG00015001108	sbds	100	87.200	ENSSPUG00000002699	SBDS	100	87.200	Sphenodon_punctatus
ENSSFOG00015001108	sbds	99	92.369	ENSSPAG00000016419	sbds	100	85.600	Stegastes_partitus
ENSSFOG00015001108	sbds	100	85.600	ENSSSCG00000007732	SBDS	100	85.600	Sus_scrofa
ENSSFOG00015001108	sbds	66	92.121	ENSTGUG00000003426	SBDS	99	92.121	Taeniopygia_guttata
ENSSFOG00015001108	sbds	99	91.165	ENSTRUG00000021443	sbds	100	91.165	Takifugu_rubripes
ENSSFOG00015001108	sbds	99	91.566	ENSTNIG00000019000	sbds	100	91.566	Tetraodon_nigroviridis
ENSSFOG00015001108	sbds	83	72.596	ENSTBEG00000001178	SBDS	100	72.596	Tupaia_belangeri
ENSSFOG00015001108	sbds	100	67.600	ENSTTRG00000003921	SBDS	100	67.600	Tursiops_truncatus
ENSSFOG00015001108	sbds	100	85.600	ENSUAMG00000001326	SBDS	100	85.600	Ursus_americanus
ENSSFOG00015001108	sbds	100	85.600	ENSUMAG00000015353	SBDS	100	85.600	Ursus_maritimus
ENSSFOG00015001108	sbds	100	85.600	ENSVVUG00000016478	SBDS	100	85.600	Vulpes_vulpes
ENSSFOG00015001108	sbds	100	90.000	ENSXETG00000010093	sbds	100	90.000	Xenopus_tropicalis
ENSSFOG00015001108	sbds	99	79.116	ENSXCOG00000010639	sbds	100	79.116	Xiphophorus_couchianus
ENSSFOG00015001108	sbds	99	89.558	ENSXMAG00000006065	sbds	100	89.558	Xiphophorus_maculatus