EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015001117 (Gene tree)
Gene ID: 108927994
Gene Symbol: rreb1b
Alias: si:ch211-279l9.6|si:ch211-279l9.7
Full Name: ras responsive element binding protein 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 26891 bases
Position: chrKV410882.1:1869634-1896524
Accession: 108927994
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015001590	zf-C2H2	PF00096.26	4e-39	1	5
ENSSFOP00015001590	zf-C2H2	PF00096.26	4e-39	2	5
ENSSFOP00015001590	zf-C2H2	PF00096.26	4e-39	3	5
ENSSFOP00015001590	zf-C2H2	PF00096.26	4e-39	4	5
ENSSFOP00015001590	zf-C2H2	PF00096.26	4e-39	5	5
ENSSFOP00015001590	zf-met	PF12874.7	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015001628	-	9490	XM_018741707	ENSSFOP00015001590	1590 (aa)	XP_018597223	-

Gene Model

Click here to download ENSSFOG00015001117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015001117's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015001117	rreb1b	55	35.366	ENSSFOG00015006108	-	52	51.020
ENSSFOG00015001117	rreb1b	53	49.057	ENSSFOG00015015878	-	94	49.057
ENSSFOG00015001117	rreb1b	60	36.275	ENSSFOG00015003121	znf668	67	44.776
ENSSFOG00015001117	rreb1b	58	37.179	ENSSFOG00015010829	-	73	50.943
ENSSFOG00015001117	rreb1b	58	42.308	ENSSFOG00015000652	ZNF775	91	53.061
ENSSFOG00015001117	rreb1b	53	40.323	ENSSFOG00015021831	-	51	48.000
ENSSFOG00015001117	rreb1b	54	40.625	ENSSFOG00015019818	-	64	40.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015001117	rreb1b	93	48.257	ENSG00000124782	RREB1	88	70.470	Homo_sapiens
ENSSFOG00015001117	rreb1b	97	47.246	ENSAPLG00000004726	RREB1	96	47.252	Anas_platyrhynchos
ENSSFOG00015001117	rreb1b	93	49.620	ENSACAG00000000520	RREB1	91	48.997	Anolis_carolinensis
ENSSFOG00015001117	rreb1b	60	70.833	ENSANAG00000029040	RREB1	92	54.545	Aotus_nancymaae
ENSSFOG00015001117	rreb1b	94	54.651	ENSAMXG00000019028	rreb1a	91	55.110	Astyanax_mexicanus
ENSSFOG00015001117	rreb1b	93	54.289	ENSAMXG00000015314	rreb1b	92	54.719	Astyanax_mexicanus
ENSSFOG00015001117	rreb1b	60	54.545	ENSCJAG00000021358	RREB1	92	54.545	Callithrix_jacchus
ENSSFOG00015001117	rreb1b	94	48.431	ENSCAFG00000009527	RREB1	97	49.107	Canis_familiaris
ENSSFOG00015001117	rreb1b	94	46.424	ENSCAFG00020013260	RREB1	94	46.227	Canis_lupus_dingo
ENSSFOG00015001117	rreb1b	93	48.929	ENSCCAG00000021905	RREB1	92	54.545	Cebus_capucinus
ENSSFOG00015001117	rreb1b	60	54.545	ENSCATG00000043662	RREB1	92	54.545	Cercocebus_atys
ENSSFOG00015001117	rreb1b	55	53.430	ENSCSAG00000007376	RREB1	93	48.894	Chlorocebus_sabaeus
ENSSFOG00015001117	rreb1b	93	50.971	ENSCPBG00000008709	RREB1	92	50.713	Chrysemys_picta_bellii
ENSSFOG00015001117	rreb1b	60	54.545	ENSCANG00000032835	RREB1	92	54.545	Colobus_angolensis_palliatus
ENSSFOG00015001117	rreb1b	91	49.089	ENSCSEG00000018342	rreb1a	93	49.020	Cynoglossus_semilaevis
ENSSFOG00015001117	rreb1b	94	57.429	ENSDARG00000063701	rreb1a	99	61.792	Danio_rerio
ENSSFOG00015001117	rreb1b	98	47.491	ENSDORG00000006979	Rreb1	98	49.346	Dipodomys_ordii
ENSSFOG00015001117	rreb1b	93	48.091	ENSEASG00005012054	RREB1	92	48.331	Equus_asinus_asinus
ENSSFOG00015001117	rreb1b	93	48.301	ENSECAG00000018169	RREB1	92	48.660	Equus_caballus
ENSSFOG00015001117	rreb1b	94	48.233	ENSFALG00000013231	RREB1	89	48.520	Ficedula_albicollis
ENSSFOG00015001117	rreb1b	93	55.168	ENSFDAG00000004213	RREB1	90	54.919	Fukomys_damarensis
ENSSFOG00015001117	rreb1b	94	48.436	ENSGALG00000012799	RREB1	92	48.389	Gallus_gallus
ENSSFOG00015001117	rreb1b	90	49.050	ENSGAGG00000002213	RREB1	91	49.020	Gopherus_agassizii
ENSSFOG00015001117	rreb1b	93	47.693	ENSGGOG00000004561	RREB1	92	53.247	Gorilla_gorilla
ENSSFOG00015001117	rreb1b	83	52.716	ENSLBEG00000013512	rreb1a	88	52.311	Labrus_bergylta
ENSSFOG00015001117	rreb1b	93	50.776	ENSLACG00000009283	RREB1	96	51.265	Latimeria_chalumnae
ENSSFOG00015001117	rreb1b	93	60.906	ENSLOCG00000011702	rreb1b	94	60.610	Lepisosteus_oculatus
ENSSFOG00015001117	rreb1b	93	47.710	ENSLAFG00000005300	RREB1	93	47.935	Loxodonta_africana
ENSSFOG00015001117	rreb1b	93	48.219	ENSMFAG00000000389	RREB1	92	54.545	Macaca_fascicularis
ENSSFOG00015001117	rreb1b	93	48.420	ENSMMUG00000007852	RREB1	92	54.545	Macaca_mulatta
ENSSFOG00015001117	rreb1b	93	48.159	ENSMNEG00000038556	RREB1	92	54.545	Macaca_nemestrina
ENSSFOG00015001117	rreb1b	60	54.545	ENSMLEG00000040965	RREB1	92	54.545	Mandrillus_leucophaeus
ENSSFOG00015001117	rreb1b	94	48.538	ENSMGAG00000003910	RREB1	92	48.295	Meleagris_gallopavo
ENSSFOG00015001117	rreb1b	93	48.499	ENSMICG00000003683	RREB1	92	54.545	Microcebus_murinus
ENSSFOG00015001117	rreb1b	93	49.632	ENSMODG00000009892	RREB1	91	49.817	Monodelphis_domestica
ENSSFOG00015001117	rreb1b	93	47.839	ENSMPUG00000000558	RREB1	91	47.818	Mustela_putorius_furo
ENSSFOG00015001117	rreb1b	93	45.594	ENSMLUG00000013153	RREB1	93	45.993	Myotis_lucifugus
ENSSFOG00015001117	rreb1b	93	49.313	ENSNGAG00000021506	Rreb1	92	49.313	Nannospalax_galili
ENSSFOG00015001117	rreb1b	63	62.887	ENSNBRG00000016744	rreb1a	86	62.887	Neolamprologus_brichardi
ENSSFOG00015001117	rreb1b	93	47.562	ENSNLEG00000011554	RREB1	92	55.844	Nomascus_leucogenys
ENSSFOG00015001117	rreb1b	93	49.331	ENSMEUG00000015377	RREB1	92	49.786	Notamacropus_eugenii
ENSSFOG00015001117	rreb1b	83	50.980	ENSOPRG00000001966	RREB1	84	50.980	Ochotona_princeps
ENSSFOG00015001117	rreb1b	93	44.397	ENSODEG00000007124	RREB1	92	44.716	Octodon_degus
ENSSFOG00015001117	rreb1b	90	50.000	ENSOMEG00000001389	rreb1a	94	50.955	Oryzias_melastigma
ENSSFOG00015001117	rreb1b	61	50.980	ENSOGAG00000025755	RREB1	93	45.045	Otolemur_garnettii
ENSSFOG00015001117	rreb1b	93	48.113	ENSPPAG00000037017	RREB1	91	55.882	Pan_paniscus
ENSSFOG00015001117	rreb1b	93	48.855	ENSPPRG00000012144	RREB1	93	49.096	Panthera_pardus
ENSSFOG00015001117	rreb1b	93	48.053	ENSPTRG00000017697	RREB1	91	55.882	Pan_troglodytes
ENSSFOG00015001117	rreb1b	60	54.545	ENSPANG00000019553	RREB1	92	54.545	Papio_anubis
ENSSFOG00015001117	rreb1b	93	64.453	ENSPKIG00000006372	rreb1b	91	64.290	Paramormyrops_kingsleyae
ENSSFOG00015001117	rreb1b	93	48.462	ENSPSIG00000006582	RREB1	91	48.752	Pelodiscus_sinensis
ENSSFOG00015001117	rreb1b	93	47.847	ENSPEMG00000014153	Rreb1	92	48.175	Peromyscus_maniculatus_bairdii
ENSSFOG00015001117	rreb1b	90	49.020	ENSPCIG00000012644	RREB1	92	49.020	Phascolarctos_cinereus
ENSSFOG00015001117	rreb1b	93	48.243	ENSPPYG00000016204	RREB1	93	49.194	Pongo_abelii
ENSSFOG00015001117	rreb1b	75	54.545	ENSPCOG00000014821	RREB1	92	54.545	Propithecus_coquereli
ENSSFOG00015001117	rreb1b	93	47.909	ENSPVAG00000014081	RREB1	96	46.855	Pteropus_vampyrus
ENSSFOG00015001117	rreb1b	95	59.987	ENSPNAG00000000486	rreb1a	88	59.768	Pygocentrus_nattereri
ENSSFOG00015001117	rreb1b	94	48.507	ENSRNOG00000015701	Rreb1	93	48.570	Rattus_norvegicus
ENSSFOG00015001117	rreb1b	60	54.545	ENSRROG00000039603	RREB1	92	54.545	Rhinopithecus_roxellana
ENSSFOG00015001117	rreb1b	93	48.726	ENSSBOG00000025257	RREB1	92	54.545	Saimiri_boliviensis_boliviensis
ENSSFOG00015001117	rreb1b	80	50.694	ENSSHAG00000005295	RREB1	90	59.375	Sarcophilus_harrisii
ENSSFOG00015001117	rreb1b	96	46.780	ENSSPUG00000007686	RREB1	95	46.796	Sphenodon_punctatus
ENSSFOG00015001117	rreb1b	97	46.964	ENSTGUG00000002309	RREB1	97	49.031	Taeniopygia_guttata
ENSSFOG00015001117	rreb1b	93	48.590	ENSUAMG00000003741	RREB1	92	48.416	Ursus_americanus
ENSSFOG00015001117	rreb1b	94	49.889	ENSVVUG00000005050	RREB1	93	48.344	Vulpes_vulpes
ENSSFOG00015001117	rreb1b	93	47.070	ENSXETG00000015435	rreb1	95	47.497	Xenopus_tropicalis