EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015001124 (Gene tree)
Gene ID: 108924112
Gene Symbol: hnrnpub
Alias: C1orf199|FLJ30202|FLJ37978|HNRNPU-AS1|HNRPU|NCRNA00201|SAF-A|hnRNPU
Full Name: heterogeneous nuclear ribonucleoprotein U-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 10112 bases
Position: chrKV410831.1:1971125-1981236
Accession: 108924112
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015001692	SAP	PF02037.27	2.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015001731	-	4384	XM_018735289	ENSSFOP00015001692	798 (aa)	XP_018590805	A0A0P7UK98

Gene Model

Click here to download ENSSFOG00015001124's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015001124's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015001124	hnrnpub	83	47.994	ENSSFOG00015007000	-	92	46.224
ENSSFOG00015001124	hnrnpub	83	47.360	ENSSFOG00015022940	HNRNPUL1	97	43.542
ENSSFOG00015001124	hnrnpub	100	80.645	ENSSFOG00015019004	hnrnpu	100	80.941
ENSSFOG00015001124	hnrnpub	61	43.976	ENSSFOG00015006544	si:ch211-107m4.1	53	46.241

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015001124	hnrnpub	78	65.839	ENSG00000153187	HNRNPU	99	75.000	Homo_sapiens
ENSSFOG00015001124	hnrnpub	100	66.547	ENSAPOG00000017400	hnrnpub	100	68.029	Acanthochromis_polyacanthus
ENSSFOG00015001124	hnrnpub	86	64.496	ENSAMEG00000009145	HNRNPU	84	67.296	Ailuropoda_melanoleuca
ENSSFOG00015001124	hnrnpub	100	67.164	ENSACIG00000012138	hnrnpub	100	66.335	Amphilophus_citrinellus
ENSSFOG00015001124	hnrnpub	100	67.431	ENSAOCG00000015843	hnrnpub	100	68.029	Amphiprion_ocellaris
ENSSFOG00015001124	hnrnpub	100	67.431	ENSAPEG00000014679	hnrnpub	100	68.029	Amphiprion_percula
ENSSFOG00015001124	hnrnpub	98	66.218	ENSATEG00000016178	hnrnpub	97	67.604	Anabas_testudineus
ENSSFOG00015001124	hnrnpub	85	75.000	ENSACAG00000004511	HNRNPU	83	66.154	Anolis_carolinensis
ENSSFOG00015001124	hnrnpub	78	65.683	ENSANAG00000033895	-	98	61.757	Aotus_nancymaae
ENSSFOG00015001124	hnrnpub	82	72.901	ENSACLG00000008165	hnrnpub	100	67.515	Astatotilapia_calliptera
ENSSFOG00015001124	hnrnpub	86	63.889	ENSBTAG00000007606	HNRNPU	98	57.041	Bos_taurus
ENSSFOG00015001124	hnrnpub	65	70.741	ENSCJAG00000016914	HNRNPU	98	61.642	Callithrix_jacchus
ENSSFOG00015001124	hnrnpub	76	67.097	ENSCAFG00020000918	HNRNPU	75	66.821	Canis_lupus_dingo
ENSSFOG00015001124	hnrnpub	76	66.935	ENSCHIG00000004900	HNRNPU	99	57.427	Capra_hircus
ENSSFOG00015001124	hnrnpub	86	65.278	ENSCPOG00000011887	HNRNPU	85	66.924	Cavia_porcellus
ENSSFOG00015001124	hnrnpub	78	65.528	ENSCCAG00000037859	-	98	61.622	Cebus_capucinus
ENSSFOG00015001124	hnrnpub	78	65.683	ENSCATG00000035273	HNRNPU	98	61.777	Cercocebus_atys
ENSSFOG00015001124	hnrnpub	86	65.278	ENSCLAG00000007100	HNRNPU	85	66.924	Chinchilla_lanigera
ENSSFOG00015001124	hnrnpub	78	65.683	ENSCSAG00000009219	HNRNPU	75	66.512	Chlorocebus_sabaeus
ENSSFOG00015001124	hnrnpub	83	82.979	ENSCHOG00000001387	HNRNPU	76	82.979	Choloepus_hoffmanni
ENSSFOG00015001124	hnrnpub	79	63.482	ENSCPBG00000009415	HNRNPU	97	58.677	Chrysemys_picta_bellii
ENSSFOG00015001124	hnrnpub	87	65.683	ENSCANG00000022780	HNRNPU	98	61.446	Colobus_angolensis_palliatus
ENSSFOG00015001124	hnrnpub	79	63.554	ENSCGRG00001020525	Hnrnpu	99	58.076	Cricetulus_griseus_chok1gshd
ENSSFOG00015001124	hnrnpub	76	91.489	ENSCSEG00000010804	hnrnpub	100	66.392	Cynoglossus_semilaevis
ENSSFOG00015001124	hnrnpub	85	75.806	ENSCVAG00000004280	hnrnpub	100	53.761	Cyprinodon_variegatus
ENSSFOG00015001124	hnrnpub	100	68.953	ENSDARG00000015206	hnrnpua	100	70.545	Danio_rerio
ENSSFOG00015001124	hnrnpub	100	64.606	ENSDARG00000004735	hnrnpub	100	65.534	Danio_rerio
ENSSFOG00015001124	hnrnpub	99	57.506	ENSDNOG00000000215	HNRNPU	88	80.000	Dasypus_novemcinctus
ENSSFOG00015001124	hnrnpub	79	63.348	ENSDORG00000015491	Hnrnpu	99	58.920	Dipodomys_ordii
ENSSFOG00015001124	hnrnpub	94	63.859	ENSETEG00000014565	HNRNPU	85	66.981	Echinops_telfairi
ENSSFOG00015001124	hnrnpub	78	64.319	ENSEASG00005003017	HNRNPU	75	66.821	Equus_asinus_asinus
ENSSFOG00015001124	hnrnpub	78	64.319	ENSECAG00000007955	HNRNPU	75	66.821	Equus_caballus
ENSSFOG00015001124	hnrnpub	100	67.702	ENSELUG00000011966	hnrnpua	98	76.844	Esox_lucius
ENSSFOG00015001124	hnrnpub	100	65.970	ENSELUG00000010733	hnrnpub	100	67.168	Esox_lucius
ENSSFOG00015001124	hnrnpub	78	65.635	ENSFCAG00000002156	HNRNPU	99	55.730	Felis_catus
ENSSFOG00015001124	hnrnpub	92	69.118	ENSFDAG00000006026	HNRNPU	99	69.118	Fukomys_damarensis
ENSSFOG00015001124	hnrnpub	100	63.754	ENSFHEG00000022639	hnrnpub	100	63.658	Fundulus_heteroclitus
ENSSFOG00015001124	hnrnpub	82	68.935	ENSGMOG00000001755	hnrnpub	99	65.417	Gadus_morhua
ENSSFOG00015001124	hnrnpub	85	71.186	ENSGALG00000010671	HNRNPU	83	64.308	Gallus_gallus
ENSSFOG00015001124	hnrnpub	82	68.110	ENSGAFG00000009369	hnrnpub	100	65.125	Gambusia_affinis
ENSSFOG00015001124	hnrnpub	82	68.511	ENSGACG00000004679	hnrnpub	99	64.554	Gasterosteus_aculeatus
ENSSFOG00015001124	hnrnpub	86	65.839	ENSGGOG00000004061	HNRNPU	98	61.757	Gorilla_gorilla
ENSSFOG00015001124	hnrnpub	82	73.196	ENSHBUG00000012290	hnrnpub	100	67.636	Haplochromis_burtoni
ENSSFOG00015001124	hnrnpub	86	65.278	ENSHGLG00000010594	-	99	57.746	Heterocephalus_glaber_female
ENSSFOG00015001124	hnrnpub	91	67.742	ENSHGLG00100015093	HNRNPU	99	67.742	Heterocephalus_glaber_male
ENSSFOG00015001124	hnrnpub	82	66.035	ENSHCOG00000020091	hnrnpub	100	62.932	Hippocampus_comes
ENSSFOG00015001124	hnrnpub	100	74.174	ENSIPUG00000007749	hnrnpu	94	95.745	Ictalurus_punctatus
ENSSFOG00015001124	hnrnpub	78	64.264	ENSJJAG00000011371	Hnrnpu	74	66.461	Jaculus_jaculus
ENSSFOG00015001124	hnrnpub	82	69.609	ENSKMAG00000004532	hnrnpub	100	66.825	Kryptolebias_marmoratus
ENSSFOG00015001124	hnrnpub	82	71.698	ENSLBEG00000022520	hnrnpub	100	67.301	Labrus_bergylta
ENSSFOG00015001124	hnrnpub	99	53.318	ENSLACG00000017463	HNRNPU	99	52.650	Latimeria_chalumnae
ENSSFOG00015001124	hnrnpub	100	80.830	ENSLOCG00000016652	hnrnpua	99	81.707	Lepisosteus_oculatus
ENSSFOG00015001124	hnrnpub	99	57.625	ENSLAFG00000021377	HNRNPU	99	59.600	Loxodonta_africana
ENSSFOG00015001124	hnrnpub	78	65.683	ENSMFAG00000037308	HNRNPU	98	61.777	Macaca_fascicularis
ENSSFOG00015001124	hnrnpub	78	65.683	ENSMMUG00000021098	HNRNPU	76	66.512	Macaca_mulatta
ENSSFOG00015001124	hnrnpub	78	65.683	ENSMNEG00000043645	HNRNPU	98	61.777	Macaca_nemestrina
ENSSFOG00015001124	hnrnpub	82	73.939	ENSMAMG00000007196	hnrnpub	100	68.712	Mastacembelus_armatus
ENSSFOG00015001124	hnrnpub	82	72.901	ENSMZEG00005003185	hnrnpub	100	67.515	Maylandia_zebra
ENSSFOG00015001124	hnrnpub	87	64.264	ENSMAUG00000008842	Hnrnpu	99	58.956	Mesocricetus_auratus
ENSSFOG00015001124	hnrnpub	94	64.319	ENSMICG00000004616	HNRNPU	99	57.679	Microcebus_murinus
ENSSFOG00015001124	hnrnpub	83	86.047	ENSMOCG00000015623	Hnrnpu	99	57.260	Microtus_ochrogaster
ENSSFOG00015001124	hnrnpub	78	74.224	ENSMALG00000018243	hnrnpub	98	68.182	Monopterus_albus
ENSSFOG00015001124	hnrnpub	78	64.264	MGP_CAROLIEiJ_G0014962	Hnrnpu	99	57.343	Mus_caroli
ENSSFOG00015001124	hnrnpub	76	67.044	ENSMUSG00000039630	Hnrnpu	99	57.362	Mus_musculus
ENSSFOG00015001124	hnrnpub	78	63.511	MGP_PahariEiJ_G0028193	Hnrnpu	99	59.053	Mus_pahari
ENSSFOG00015001124	hnrnpub	78	64.264	MGP_SPRETEiJ_G0015761	Hnrnpu	99	57.362	Mus_spretus
ENSSFOG00015001124	hnrnpub	86	63.344	ENSMLUG00000000475	HNRNPU	88	66.041	Myotis_lucifugus
ENSSFOG00015001124	hnrnpub	99	57.126	ENSNGAG00000019075	Hnrnpu	99	59.264	Nannospalax_galili
ENSSFOG00015001124	hnrnpub	82	72.607	ENSNBRG00000017855	hnrnpub	100	68.364	Neolamprologus_brichardi
ENSSFOG00015001124	hnrnpub	100	65.981	ENSONIG00000001260	hnrnpub	100	67.476	Oreochromis_niloticus
ENSSFOG00015001124	hnrnpub	85	66.774	ENSOCUG00000014469	HNRNPU	78	66.351	Oryctolagus_cuniculus
ENSSFOG00015001124	hnrnpub	100	65.144	ENSORLG00000016114	hnrnpub	100	66.466	Oryzias_latipes
ENSSFOG00015001124	hnrnpub	81	72.182	ENSORLG00020005363	hnrnpub	100	66.104	Oryzias_latipes_hni
ENSSFOG00015001124	hnrnpub	81	72.182	ENSORLG00015001190	hnrnpub	100	65.983	Oryzias_latipes_hsok
ENSSFOG00015001124	hnrnpub	81	72.182	ENSOMEG00000014951	hnrnpub	100	66.426	Oryzias_melastigma
ENSSFOG00015001124	hnrnpub	78	64.165	ENSOGAG00000014024	HNRNPU	99	56.876	Otolemur_garnettii
ENSSFOG00015001124	hnrnpub	84	82.979	ENSOARG00000004985	HNRNPU	87	82.979	Ovis_aries
ENSSFOG00015001124	hnrnpub	78	65.839	ENSPPAG00000038652	HNRNPU	98	61.892	Pan_paniscus
ENSSFOG00015001124	hnrnpub	79	65.038	ENSPPRG00000002662	HNRNPU	99	56.204	Panthera_pardus
ENSSFOG00015001124	hnrnpub	78	65.839	ENSPTRG00000002182	HNRNPU	98	61.892	Pan_troglodytes
ENSSFOG00015001124	hnrnpub	78	65.683	ENSPANG00000011643	HNRNPU	98	61.777	Papio_anubis
ENSSFOG00015001124	hnrnpub	100	81.352	ENSPKIG00000006885	hnrnpua	100	82.045	Paramormyrops_kingsleyae
ENSSFOG00015001124	hnrnpub	100	86.358	ENSPKIG00000022332	hnrnpub	100	86.358	Paramormyrops_kingsleyae
ENSSFOG00015001124	hnrnpub	75	66.502	ENSPCIG00000008657	HNRNPU	99	55.366	Phascolarctos_cinereus
ENSSFOG00015001124	hnrnpub	82	68.398	ENSPFOG00000002908	hnrnpub	100	64.769	Poecilia_formosa
ENSSFOG00015001124	hnrnpub	82	67.775	ENSPLAG00000004160	hnrnpub	100	64.964	Poecilia_latipinna
ENSSFOG00015001124	hnrnpub	94	64.165	ENSPCOG00000018655	-	99	57.479	Propithecus_coquereli
ENSSFOG00015001124	hnrnpub	75	66.174	ENSPCOG00000003883	-	99	58.545	Propithecus_coquereli
ENSSFOG00015001124	hnrnpub	86	63.889	ENSPVAG00000002581	HNRNPU	84	66.615	Pteropus_vampyrus
ENSSFOG00015001124	hnrnpub	82	73.343	ENSPNYG00000021642	hnrnpub	100	67.879	Pundamilia_nyererei
ENSSFOG00015001124	hnrnpub	100	74.484	ENSPNAG00000001055	hnrnpub	100	74.334	Pygocentrus_nattereri
ENSSFOG00015001124	hnrnpub	77	66.032	ENSRNOG00000033790	Hnrnpu	99	57.809	Rattus_norvegicus
ENSSFOG00015001124	hnrnpub	78	64.907	ENSRBIG00000031519	HNRNPU	98	61.104	Rhinopithecus_bieti
ENSSFOG00015001124	hnrnpub	78	65.683	ENSRROG00000041642	HNRNPU	98	61.096	Rhinopithecus_roxellana
ENSSFOG00015001124	hnrnpub	82	70.392	ENSSMAG00000003607	hnrnpub	100	66.824	Scophthalmus_maximus
ENSSFOG00015001124	hnrnpub	82	72.595	ENSSDUG00000005912	hnrnpub	100	68.133	Seriola_dumerili
ENSSFOG00015001124	hnrnpub	82	72.303	ENSSLDG00000004899	hnrnpub	100	68.945	Seriola_lalandi_dorsalis
ENSSFOG00015001124	hnrnpub	79	64.462	ENSSPUG00000011393	HNRNPU	99	57.679	Sphenodon_punctatus
ENSSFOG00015001124	hnrnpub	82	71.157	ENSSPAG00000011853	hnrnpub	100	68.029	Stegastes_partitus
ENSSFOG00015001124	hnrnpub	86	64.012	ENSSSCG00000010877	HNRNPU	99	57.310	Sus_scrofa
ENSSFOG00015001124	hnrnpub	100	65.625	ENSTRUG00000007759	hnrnpub	100	65.865	Takifugu_rubripes
ENSSFOG00015001124	hnrnpub	100	62.545	ENSTNIG00000009725	hnrnpub	99	86.957	Tetraodon_nigroviridis
ENSSFOG00015001124	hnrnpub	53	80.808	ENSTTRG00000005281	HNRNPU	55	80.808	Tursiops_truncatus
ENSSFOG00015001124	hnrnpub	86	64.165	ENSUAMG00000021120	HNRNPU	99	60.193	Ursus_americanus
ENSSFOG00015001124	hnrnpub	87	66.354	ENSUMAG00000012322	HNRNPU	98	64.332	Ursus_maritimus
ENSSFOG00015001124	hnrnpub	79	63.889	ENSVPAG00000010520	HNRNPU	89	63.240	Vicugna_pacos
ENSSFOG00015001124	hnrnpub	76	67.097	ENSVVUG00000026524	HNRNPU	75	66.821	Vulpes_vulpes
ENSSFOG00015001124	hnrnpub	99	56.744	ENSXETG00000011386	hnrnpu	99	55.869	Xenopus_tropicalis
ENSSFOG00015001124	hnrnpub	82	68.254	ENSXMAG00000010356	hnrnpub	100	64.573	Xiphophorus_maculatus