EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015001128 (Gene tree)
Gene ID: 108918092
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 72103 bases
Position: chrKV411250.1:7629163-7701265
Accession: 108918092
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015001856	S1	PF00575.23	3.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015001896	-	2706	XM_018725068	ENSSFOP00015001856	901 (aa)	XP_018580584	-

Gene Model

Click here to download ENSSFOG00015001128's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015001128's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015001128	si:ch211-117n7.8	93	58.087	ENSG00000068784	SRBD1	87	58.087	Homo_sapiens
ENSSFOG00015001128	si:ch211-117n7.8	99	61.003	ENSAPOG00000005103	si:ch211-117n7.8	97	61.003	Acanthochromis_polyacanthus
ENSSFOG00015001128	si:ch211-117n7.8	90	59.953	ENSAMEG00000005993	SRBD1	84	59.953	Ailuropoda_melanoleuca
ENSSFOG00015001128	si:ch211-117n7.8	94	66.053	ENSACIG00000009875	si:ch211-117n7.8	88	66.207	Amphilophus_citrinellus
ENSSFOG00015001128	si:ch211-117n7.8	94	65.938	ENSAOCG00000024718	si:ch211-117n7.8	87	65.938	Amphiprion_ocellaris
ENSSFOG00015001128	si:ch211-117n7.8	99	61.811	ENSAPEG00000002645	si:ch211-117n7.8	99	61.811	Amphiprion_percula
ENSSFOG00015001128	si:ch211-117n7.8	94	65.323	ENSATEG00000010844	si:ch211-117n7.8	86	65.323	Anabas_testudineus
ENSSFOG00015001128	si:ch211-117n7.8	90	61.493	ENSAPLG00000006313	SRBD1	96	55.635	Anas_platyrhynchos
ENSSFOG00015001128	si:ch211-117n7.8	99	54.832	ENSANAG00000025573	SRBD1	94	54.937	Aotus_nancymaae
ENSSFOG00015001128	si:ch211-117n7.8	94	66.438	ENSACLG00000024219	si:ch211-117n7.8	85	66.552	Astatotilapia_calliptera
ENSSFOG00015001128	si:ch211-117n7.8	94	71.247	ENSAMXG00000004294	SRBD1	93	68.348	Astyanax_mexicanus
ENSSFOG00015001128	si:ch211-117n7.8	90	60.617	ENSBTAG00000007508	SRBD1	82	60.617	Bos_taurus
ENSSFOG00015001128	si:ch211-117n7.8	92	58.430	ENSCJAG00000000727	SRBD1	85	58.430	Callithrix_jacchus
ENSSFOG00015001128	si:ch211-117n7.8	90	59.882	ENSCAFG00000002554	SRBD1	84	59.882	Canis_familiaris
ENSSFOG00015001128	si:ch211-117n7.8	90	61.165	ENSCAFG00020026284	SRBD1	97	61.165	Canis_lupus_dingo
ENSSFOG00015001128	si:ch211-117n7.8	90	59.716	ENSCHIG00000016535	SRBD1	82	59.716	Capra_hircus
ENSSFOG00015001128	si:ch211-117n7.8	99	54.845	ENSTSYG00000012797	SRBD1	96	54.845	Carlito_syrichta
ENSSFOG00015001128	si:ch211-117n7.8	90	60.168	ENSCPOG00000004773	SRBD1	84	60.168	Cavia_porcellus
ENSSFOG00015001128	si:ch211-117n7.8	99	55.252	ENSCCAG00000025589	SRBD1	94	55.357	Cebus_capucinus
ENSSFOG00015001128	si:ch211-117n7.8	93	58.087	ENSCATG00000039530	SRBD1	87	58.087	Cercocebus_atys
ENSSFOG00015001128	si:ch211-117n7.8	90	60.650	ENSCLAG00000008623	SRBD1	84	60.650	Chinchilla_lanigera
ENSSFOG00015001128	si:ch211-117n7.8	99	55.172	ENSCSAG00000013350	SRBD1	94	55.172	Chlorocebus_sabaeus
ENSSFOG00015001128	si:ch211-117n7.8	79	72.000	ENSCHOG00000003805	SRBD1	70	72.000	Choloepus_hoffmanni
ENSSFOG00015001128	si:ch211-117n7.8	90	61.447	ENSCPBG00000005677	SRBD1	96	56.373	Chrysemys_picta_bellii
ENSSFOG00015001128	si:ch211-117n7.8	85	41.604	ENSCING00000005950	-	99	41.604	Ciona_intestinalis
ENSSFOG00015001128	si:ch211-117n7.8	85	44.661	ENSCSAVG00000000861	-	99	44.661	Ciona_savignyi
ENSSFOG00015001128	si:ch211-117n7.8	93	58.087	ENSCANG00000016307	SRBD1	87	58.087	Colobus_angolensis_palliatus
ENSSFOG00015001128	si:ch211-117n7.8	90	59.498	ENSCGRG00001000513	Srbd1	84	59.498	Cricetulus_griseus_chok1gshd
ENSSFOG00015001128	si:ch211-117n7.8	90	59.498	ENSCGRG00000002283	Srbd1	84	59.498	Cricetulus_griseus_crigri
ENSSFOG00015001128	si:ch211-117n7.8	93	63.521	ENSCSEG00000000856	si:ch211-117n7.8	87	63.479	Cynoglossus_semilaevis
ENSSFOG00015001128	si:ch211-117n7.8	99	63.459	ENSCVAG00000020212	si:ch211-117n7.8	98	63.883	Cyprinodon_variegatus
ENSSFOG00015001128	si:ch211-117n7.8	90	59.011	ENSDNOG00000018686	SRBD1	84	59.011	Dasypus_novemcinctus
ENSSFOG00015001128	si:ch211-117n7.8	93	58.439	ENSDORG00000010468	Srbd1	87	58.439	Dipodomys_ordii
ENSSFOG00015001128	si:ch211-117n7.8	85	36.176	FBgn0051156	CG31156	79	36.305	Drosophila_melanogaster
ENSSFOG00015001128	si:ch211-117n7.8	80	58.834	ENSETEG00000000739	SRBD1	77	59.016	Echinops_telfairi
ENSSFOG00015001128	si:ch211-117n7.8	78	48.556	ENSEBUG00000008902	si:ch211-117n7.8	96	48.556	Eptatretus_burgeri
ENSSFOG00015001128	si:ch211-117n7.8	90	56.856	ENSEASG00005003132	SRBD1	98	57.692	Equus_asinus_asinus
ENSSFOG00015001128	si:ch211-117n7.8	98	55.688	ENSECAG00000013865	SRBD1	88	55.688	Equus_caballus
ENSSFOG00015001128	si:ch211-117n7.8	99	66.912	ENSELUG00000012592	si:ch211-117n7.8	91	66.912	Esox_lucius
ENSSFOG00015001128	si:ch211-117n7.8	90	59.716	ENSFCAG00000005101	SRBD1	83	59.716	Felis_catus
ENSSFOG00015001128	si:ch211-117n7.8	90	61.437	ENSFALG00000012966	SRBD1	96	56.381	Ficedula_albicollis
ENSSFOG00015001128	si:ch211-117n7.8	90	61.267	ENSFDAG00000016670	SRBD1	85	61.267	Fukomys_damarensis
ENSSFOG00015001128	si:ch211-117n7.8	99	60.830	ENSFHEG00000019480	si:ch211-117n7.8	96	60.830	Fundulus_heteroclitus
ENSSFOG00015001128	si:ch211-117n7.8	53	62.708	ENSGMOG00000018010	-	100	62.708	Gadus_morhua
ENSSFOG00015001128	si:ch211-117n7.8	90	61.283	ENSGALG00000009990	SRBD1	96	56.594	Gallus_gallus
ENSSFOG00015001128	si:ch211-117n7.8	94	66.667	ENSGAFG00000019664	si:ch211-117n7.8	86	66.667	Gambusia_affinis
ENSSFOG00015001128	si:ch211-117n7.8	67	66.928	ENSGACG00000010794	si:ch211-117n7.8	100	67.085	Gasterosteus_aculeatus
ENSSFOG00015001128	si:ch211-117n7.8	97	55.404	ENSGAGG00000006166	SRBD1	99	61.091	Gopherus_agassizii
ENSSFOG00015001128	si:ch211-117n7.8	93	58.553	ENSGGOG00000005910	SRBD1	88	58.553	Gorilla_gorilla
ENSSFOG00015001128	si:ch211-117n7.8	91	57.092	ENSHBUG00000013207	si:ch211-117n7.8	99	53.008	Haplochromis_burtoni
ENSSFOG00015001128	si:ch211-117n7.8	90	60.120	ENSHGLG00000018153	-	84	60.120	Heterocephalus_glaber_female
ENSSFOG00015001128	si:ch211-117n7.8	90	60.120	ENSHGLG00100015183	-	84	60.120	Heterocephalus_glaber_male
ENSSFOG00015001128	si:ch211-117n7.8	91	70.694	ENSIPUG00000009661	srbd1	97	64.885	Ictalurus_punctatus
ENSSFOG00015001128	si:ch211-117n7.8	96	58.249	ENSSTOG00000005898	SRBD1	89	57.731	Ictidomys_tridecemlineatus
ENSSFOG00015001128	si:ch211-117n7.8	99	54.478	ENSJJAG00000022244	Srbd1	94	54.478	Jaculus_jaculus
ENSSFOG00015001128	si:ch211-117n7.8	94	65.708	ENSKMAG00000003473	si:ch211-117n7.8	86	65.708	Kryptolebias_marmoratus
ENSSFOG00015001128	si:ch211-117n7.8	99	61.507	ENSLBEG00000027518	si:ch211-117n7.8	97	61.507	Labrus_bergylta
ENSSFOG00015001128	si:ch211-117n7.8	90	60.973	ENSLACG00000009790	SRBD1	98	60.973	Latimeria_chalumnae
ENSSFOG00015001128	si:ch211-117n7.8	99	64.249	ENSLOCG00000016360	si:ch211-117n7.8	96	65.456	Lepisosteus_oculatus
ENSSFOG00015001128	si:ch211-117n7.8	99	55.172	ENSMFAG00000042026	SRBD1	94	55.172	Macaca_fascicularis
ENSSFOG00015001128	si:ch211-117n7.8	93	58.087	ENSMMUG00000003490	SRBD1	87	58.087	Macaca_mulatta
ENSSFOG00015001128	si:ch211-117n7.8	99	53.710	ENSMNEG00000034701	SRBD1	94	53.710	Macaca_nemestrina
ENSSFOG00015001128	si:ch211-117n7.8	99	55.172	ENSMLEG00000000745	SRBD1	94	55.172	Mandrillus_leucophaeus
ENSSFOG00015001128	si:ch211-117n7.8	99	60.415	ENSMAMG00000021921	si:ch211-117n7.8	97	60.870	Mastacembelus_armatus
ENSSFOG00015001128	si:ch211-117n7.8	94	66.438	ENSMZEG00005027369	si:ch211-117n7.8	85	66.552	Maylandia_zebra
ENSSFOG00015001128	si:ch211-117n7.8	85	57.875	ENSMGAG00000010273	SRBD1	99	57.875	Meleagris_gallopavo
ENSSFOG00015001128	si:ch211-117n7.8	88	56.272	ENSMAUG00000013916	Srbd1	99	56.573	Mesocricetus_auratus
ENSSFOG00015001128	si:ch211-117n7.8	99	54.697	ENSMICG00000007835	SRBD1	94	54.697	Microcebus_murinus
ENSSFOG00015001128	si:ch211-117n7.8	90	59.498	ENSMOCG00000018716	Srbd1	84	59.498	Microtus_ochrogaster
ENSSFOG00015001128	si:ch211-117n7.8	99	60.293	ENSMMOG00000007507	si:ch211-117n7.8	99	60.293	Mola_mola
ENSSFOG00015001128	si:ch211-117n7.8	88	67.683	ENSMALG00000001562	si:ch211-117n7.8	85	65.899	Monopterus_albus
ENSSFOG00015001128	si:ch211-117n7.8	97	56.952	MGP_CAROLIEiJ_G0021934	Srbd1	99	57.895	Mus_caroli
ENSSFOG00015001128	si:ch211-117n7.8	97	56.793	ENSMUSG00000024135	Srbd1	98	54.676	Mus_musculus
ENSSFOG00015001128	si:ch211-117n7.8	97	56.111	MGP_PahariEiJ_G0020924	Srbd1	89	56.111	Mus_pahari
ENSSFOG00015001128	si:ch211-117n7.8	97	56.618	MGP_SPRETEiJ_G0022850	Srbd1	89	56.618	Mus_spretus
ENSSFOG00015001128	si:ch211-117n7.8	90	59.716	ENSMLUG00000007039	SRBD1	84	59.716	Myotis_lucifugus
ENSSFOG00015001128	si:ch211-117n7.8	90	57.688	ENSNGAG00000011893	Srbd1	84	57.688	Nannospalax_galili
ENSSFOG00015001128	si:ch211-117n7.8	96	61.605	ENSNBRG00000012873	si:ch211-117n7.8	99	59.979	Neolamprologus_brichardi
ENSSFOG00015001128	si:ch211-117n7.8	99	55.115	ENSNLEG00000016877	SRBD1	94	55.115	Nomascus_leucogenys
ENSSFOG00015001128	si:ch211-117n7.8	90	59.206	ENSODEG00000012095	SRBD1	85	59.206	Octodon_degus
ENSSFOG00015001128	si:ch211-117n7.8	94	66.667	ENSONIG00000000945	si:ch211-117n7.8	99	67.101	Oreochromis_niloticus
ENSSFOG00015001128	si:ch211-117n7.8	90	59.574	ENSOCUG00000015385	SRBD1	84	59.574	Oryctolagus_cuniculus
ENSSFOG00015001128	si:ch211-117n7.8	94	62.227	ENSORLG00000004427	si:ch211-117n7.8	84	62.227	Oryzias_latipes
ENSSFOG00015001128	si:ch211-117n7.8	94	65.596	ENSORLG00020012792	si:ch211-117n7.8	85	65.596	Oryzias_latipes_hni
ENSSFOG00015001128	si:ch211-117n7.8	94	65.327	ENSORLG00015018598	si:ch211-117n7.8	85	65.327	Oryzias_latipes_hsok
ENSSFOG00015001128	si:ch211-117n7.8	95	65.040	ENSOMEG00000012229	si:ch211-117n7.8	84	66.923	Oryzias_melastigma
ENSSFOG00015001128	si:ch211-117n7.8	90	56.754	ENSOGAG00000001076	SRBD1	84	56.754	Otolemur_garnettii
ENSSFOG00015001128	si:ch211-117n7.8	90	55.176	ENSOARG00000005958	SRBD1	84	55.176	Ovis_aries
ENSSFOG00015001128	si:ch211-117n7.8	90	59.763	ENSPPAG00000038442	SRBD1	87	58.087	Pan_paniscus
ENSSFOG00015001128	si:ch211-117n7.8	90	59.882	ENSPPRG00000003449	SRBD1	83	60.024	Panthera_pardus
ENSSFOG00015001128	si:ch211-117n7.8	90	60.000	ENSPTIG00000012495	SRBD1	83	60.142	Panthera_tigris_altaica
ENSSFOG00015001128	si:ch211-117n7.8	90	59.882	ENSPTRG00000011889	SRBD1	87	58.200	Pan_troglodytes
ENSSFOG00015001128	si:ch211-117n7.8	99	55.277	ENSPANG00000008063	SRBD1	94	55.277	Papio_anubis
ENSSFOG00015001128	si:ch211-117n7.8	99	70.501	ENSPKIG00000021973	si:ch211-117n7.8	96	70.594	Paramormyrops_kingsleyae
ENSSFOG00015001128	si:ch211-117n7.8	92	60.000	ENSPSIG00000008992	SRBD1	86	60.000	Pelodiscus_sinensis
ENSSFOG00015001128	si:ch211-117n7.8	90	66.110	ENSPMGG00000013348	si:ch211-117n7.8	98	60.714	Periophthalmus_magnuspinnatus
ENSSFOG00015001128	si:ch211-117n7.8	90	58.178	ENSPEMG00000020684	Srbd1	84	58.178	Peromyscus_maniculatus_bairdii
ENSSFOG00015001128	si:ch211-117n7.8	94	67.436	ENSPFOG00000010650	si:ch211-117n7.8	86	67.436	Poecilia_formosa
ENSSFOG00015001128	si:ch211-117n7.8	94	67.474	ENSPLAG00000002141	si:ch211-117n7.8	86	67.474	Poecilia_latipinna
ENSSFOG00015001128	si:ch211-117n7.8	94	67.436	ENSPMEG00000018537	si:ch211-117n7.8	86	67.436	Poecilia_mexicana
ENSSFOG00015001128	si:ch211-117n7.8	99	62.225	ENSPREG00000003258	si:ch211-117n7.8	97	62.225	Poecilia_reticulata
ENSSFOG00015001128	si:ch211-117n7.8	99	51.768	ENSPPYG00000012444	SRBD1	94	51.670	Pongo_abelii
ENSSFOG00015001128	si:ch211-117n7.8	81	54.497	ENSPCAG00000005629	SRBD1	80	54.497	Procavia_capensis
ENSSFOG00015001128	si:ch211-117n7.8	90	49.824	ENSPCOG00000017669	SRBD1	83	49.824	Propithecus_coquereli
ENSSFOG00015001128	si:ch211-117n7.8	90	51.598	ENSPVAG00000001782	SRBD1	84	51.720	Pteropus_vampyrus
ENSSFOG00015001128	si:ch211-117n7.8	91	62.932	ENSPNYG00000000508	si:ch211-117n7.8	99	58.091	Pundamilia_nyererei
ENSSFOG00015001128	si:ch211-117n7.8	99	67.166	ENSPNAG00000013492	SRBD1	97	66.947	Pygocentrus_nattereri
ENSSFOG00015001128	si:ch211-117n7.8	93	57.750	ENSRNOG00000014720	Srbd1	87	57.865	Rattus_norvegicus
ENSSFOG00015001128	si:ch211-117n7.8	92	58.891	ENSRBIG00000033486	SRBD1	85	58.891	Rhinopithecus_bieti
ENSSFOG00015001128	si:ch211-117n7.8	92	58.891	ENSRROG00000041599	SRBD1	85	58.891	Rhinopithecus_roxellana
ENSSFOG00015001128	si:ch211-117n7.8	90	59.408	ENSSBOG00000024982	SRBD1	84	59.408	Saimiri_boliviensis_boliviensis
ENSSFOG00015001128	si:ch211-117n7.8	93	65.167	ENSSMAG00000018256	si:ch211-117n7.8	85	65.167	Scophthalmus_maximus
ENSSFOG00015001128	si:ch211-117n7.8	94	65.862	ENSSLDG00000023189	si:ch211-117n7.8	86	65.862	Seriola_lalandi_dorsalis
ENSSFOG00015001128	si:ch211-117n7.8	99	52.183	ENSSARG00000009740	SRBD1	94	52.183	Sorex_araneus
ENSSFOG00015001128	si:ch211-117n7.8	89	62.485	ENSSPUG00000010475	SRBD1	100	58.397	Sphenodon_punctatus
ENSSFOG00015001128	si:ch211-117n7.8	94	63.720	ENSSPAG00000008092	-	87	63.636	Stegastes_partitus
ENSSFOG00015001128	si:ch211-117n7.8	90	59.479	ENSSSCG00000008445	SRBD1	82	59.479	Sus_scrofa
ENSSFOG00015001128	si:ch211-117n7.8	90	61.091	ENSTGUG00000003878	SRBD1	100	61.091	Taeniopygia_guttata
ENSSFOG00015001128	si:ch211-117n7.8	94	66.397	ENSTRUG00000007080	si:ch211-117n7.8	96	66.397	Takifugu_rubripes
ENSSFOG00015001128	si:ch211-117n7.8	89	66.429	ENSTNIG00000007464	si:ch211-117n7.8	82	66.429	Tetraodon_nigroviridis
ENSSFOG00015001128	si:ch211-117n7.8	72	80.851	ENSTBEG00000004556	SRBD1	64	80.851	Tupaia_belangeri
ENSSFOG00015001128	si:ch211-117n7.8	85	61.837	ENSTTRG00000011871	SRBD1	76	61.837	Tursiops_truncatus
ENSSFOG00015001128	si:ch211-117n7.8	90	59.953	ENSUAMG00000008126	SRBD1	97	54.710	Ursus_americanus
ENSSFOG00015001128	si:ch211-117n7.8	90	59.834	ENSUMAG00000012902	SRBD1	83	59.834	Ursus_maritimus
ENSSFOG00015001128	si:ch211-117n7.8	90	59.668	ENSVPAG00000006825	SRBD1	92	59.668	Vicugna_pacos
ENSSFOG00015001128	si:ch211-117n7.8	90	60.370	ENSVVUG00000005389	SRBD1	84	59.834	Vulpes_vulpes
ENSSFOG00015001128	si:ch211-117n7.8	99	47.065	ENSXETG00000002760	srbd1	97	47.100	Xenopus_tropicalis
ENSSFOG00015001128	si:ch211-117n7.8	94	66.897	ENSXMAG00000016861	si:ch211-117n7.8	86	66.897	Xiphophorus_maculatus